RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	KIAA0586	Q9BVV6	1533 aa		43.12	■■■■■ 4.49
TCF12-222	ENST00000561152	ARAP1	Q96P48	1450 aa		43.08	■■■■■ 4.49
TCF12-222	ENST00000561152	JPH4	Q96JJ6	628 aa		43.05	■■■■■ 4.48
TCF12-222	ENST00000561152	CSRNP3	Q8WYN3	585 aa		43.04	■■■■■ 4.48
TCF12-222	ENST00000561152	PRX	Q9BXM0	1461 aa		43.03	■■■■■ 4.48
TCF12-222	ENST00000561152	CYB5RL	Q6IPT4	315 aa		43.03	■■■■■ 4.48
TCF12-222	ENST00000561152	PRG4	Q92954	1404 aa	Predicted RBP	42.97	■■■■■ 4.47
TCF12-222	ENST00000561152	ERCC6L2	Q5T890	1561 aa		42.94	■■■■■ 4.46
TCF12-222	ENST00000561152	IQGAP2	Q13576	1575 aa		42.9	■■■■■ 4.46
TCF12-222	ENST00000561152	FAM9A	Q8IZU1	332 aa	Predicted RBP	42.86	■■■■■ 4.45
TCF12-222	ENST00000561152	CTTNBP2	Q8WZ74	1663 aa		42.81	■■■■■ 4.44
TCF12-222	ENST00000561152	CARMIL2	Q6F5E8	1435 aa		42.71	■■■■■ 4.43
TCF12-222	ENST00000561152	KIF21B	O75037	1637 aa		42.67	■■■■■ 4.42
TCF12-222	ENST00000561152	UGGT2	Q9NYU1	1516 aa		42.66	■■■■■ 4.42
TCF12-222	ENST00000561152	DISP1	Q96F81	1524 aa		42.54	■■■■■ 4.4
TCF12-222	ENST00000561152	TNIK	Q9UKE5	1360 aa		42.52	■■■■■ 4.4
TCF12-222	ENST00000561152	GOLGA3	Q08378	1498 aa		42.49	■■■■■ 4.39
TCF12-222	ENST00000561152	KIAA0556	O60303	1618 aa		42.48	■■■■■ 4.39
TCF12-222	ENST00000561152	PTPRG	P23470	1445 aa		42.47	■■■■■ 4.39
TCF12-222	ENST00000561152	TTBK1	Q5TCY1	1321 aa	Predicted RBP	42.35	■■■■■ 4.37
TCF12-222	ENST00000561152	UBTF	P17480	764 aa	Known RBP	42.3	■■■■■ 4.36
TCF12-222	ENST00000561152	ADCY10	Q96PN6	1610 aa		42.29	■■■■■ 4.36
TCF12-222	ENST00000561152	EHMT2	Q96KQ7	1210 aa		42.26	■■■■■ 4.36
TCF12-222	ENST00000561152	NPM1	P06748	294 aa	Known RBP eCLIP	42.24	■■■■■ 4.35
TCF12-222	ENST00000561152	SAMD9	Q5K651	1589 aa		42.22	■■■■■ 4.35
TCF12-222	ENST00000561152	UACA	Q9BZF9	1416 aa		42.2	■■■■■ 4.35
TCF12-222	ENST00000561152	UHRF1BP1L	A0JNW5	1464 aa		42.17	■■■■■ 4.34
TCF12-222	ENST00000561152	TRH	P20396	242 aa	Predicted RBP	42.16	■■■■■ 4.34
TCF12-222	ENST00000561152	RANGAP1	P46060	587 aa	Predicted RBP	42.13	■■■■■ 4.33
TCF12-222	ENST00000561152	ABCC2	Q92887	1545 aa		42.12	■■■■■ 4.33
TCF12-222	ENST00000561152	EFCAB5	A4FU69	1503 aa		42.11	■■■■■ 4.33
TCF12-222	ENST00000561152	P3H3	Q8IVL6	736 aa		42.11	■■■■■ 4.33
TCF12-222	ENST00000561152	MAPKBP1	O60336	1514 aa		42.05	■■■■■ 4.32
TCF12-222	ENST00000561152	PLB1	Q6P1J6	1458 aa		42.01	■■■■■ 4.32
TCF12-222	ENST00000561152	ABCA8	O94911	1581 aa		42	■■■■■ 4.31
TCF12-222	ENST00000561152	KDM5B	Q9UGL1	1544 aa		41.95	■■■■■ 4.31
TCF12-222	ENST00000561152	FHOD3	Q2V2M9	1422 aa		41.95	■■■■■ 4.31
TCF12-222	ENST00000561152	ZCCHC11	Q5TAX3	1644 aa	Known RBP	41.87	■■■■■ 4.29
TCF12-222	ENST00000561152	ARHGAP35	Q9NRY4	1499 aa		41.83	■■■■■ 4.29
TCF12-222	ENST00000561152	RAPGEF6	Q8TEU7	1601 aa		41.83	■■■■■ 4.29
TCF12-222	ENST00000561152	ABCC10	Q5T3U5	1492 aa		41.82	■■■■■ 4.29
TCF12-222	ENST00000561152	ASXL2	Q76L83	1435 aa		41.79	■■■■■ 4.28
TCF12-222	ENST00000561152	KIF13A	Q9H1H9	1805 aa		41.79	■■■■■ 4.28
TCF12-222	ENST00000561152	DIP2B	Q9P265	1576 aa		41.76	■■■■■ 4.27
TCF12-222	ENST00000561152	FAM69C	Q0P6D2	419 aa		41.72	■■■■■ 4.27
TCF12-222	ENST00000561152	FMN1	Q68DA7	1419 aa		41.71	■■■■■ 4.27
TCF12-222	ENST00000561152	CLIP1	P30622	1438 aa		41.64	■■■■■ 4.26
TCF12-222	ENST00000561152	ATP10B	O94823	1461 aa		41.63	■■■■■ 4.25
TCF12-222	ENST00000561152	NUP153	P49790	1475 aa	Known RBP	41.62	■■■■■ 4.25
TCF12-222	ENST00000561152	WDR7	Q9Y4E6	1490 aa		41.62	■■■■■ 4.25
TCF12-222	ENST00000561152	ARID3C	A6NKF2	412 aa		41.59	■■■■■ 4.25
TCF12-222	ENST00000561152	GLI2	P10070	1586 aa		41.57	■■■■■ 4.25
TCF12-222	ENST00000561152	EPRS	P07814	1512 aa	Known RBP	41.55	■■■■■ 4.24
TCF12-222	ENST00000561152	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	41.53	■■■■■ 4.24
TCF12-222	ENST00000561152	HNRNPUL2	Q1KMD3	747 aa	Known RBP	41.53	■■■■■ 4.24
TCF12-222	ENST00000561152	HECW1	Q76N89	1606 aa		41.51	■■■■■ 4.24
TCF12-222	ENST00000561152	LOC105371045	A0A1W2PR82	267 aa		41.5	■■■■■ 4.23
TCF12-222	ENST00000561152	CEP162	Q5TB80	1403 aa		41.47	■■■■■ 4.23
TCF12-222	ENST00000561152	ATP1B4	Q9UN42	357 aa	Predicted RBP	41.43	■■■■■ 4.22
TCF12-222	ENST00000561152	KCNH8	Q96L42	1107 aa		41.4	■■■■■ 4.22
TCF12-222	ENST00000561152	TSPOAP1	O95153	1857 aa		41.4	■■■■■ 4.22
TCF12-222	ENST00000561152	MAP3K4	Q9Y6R4	1608 aa		41.36	■■■■■ 4.21
TCF12-222	ENST00000561152	CASKIN1	Q8WXD9	1431 aa		41.35	■■■■■ 4.21
TCF12-222	ENST00000561152	PLEKHD1	A6NEE1	506 aa		41.35	■■■■■ 4.21
TCF12-222	ENST00000561152	CDK13	Q14004	1512 aa	Known RBP	41.34	■■■■■ 4.21
TCF12-222	ENST00000561152	PCF11	O94913	1555 aa	Known RBP	41.33	■■■■■ 4.21
TCF12-222	ENST00000561152	CFAP43	Q8NDM7	1665 aa		41.31	■■■■■ 4.2
TCF12-222	ENST00000561152	FYCO1	Q9BQS8	1478 aa		41.29	■■■■■ 4.2
TCF12-222	ENST00000561152	CDK11A	Q9UQ88	783 aa	Predicted RBP	41.25	■■■■■ 4.19
TCF12-222	ENST00000561152	PPRC1	Q5VV67	1664 aa	Known RBP	41.24	■■■■■ 4.19
TCF12-222	ENST00000561152	CCDC18	Q5T9S5	1454 aa		41.23	■■■■■ 4.19
TCF12-222	ENST00000561152	TEX14	Q8IWB6	1497 aa		41.23	■■■■■ 4.19
TCF12-222	ENST00000561152	CD109	Q6YHK3	1445 aa		41.22	■■■■■ 4.19
TCF12-222	ENST00000561152	ABCA9	Q8IUA7	1624 aa		41.21	■■■■■ 4.19
TCF12-222	ENST00000561152	LRRIQ1	Q96JM4	1722 aa		41.21	■■■■■ 4.19
TCF12-222	ENST00000561152	MAGI3	Q5TCQ9	1506 aa		41.15	■■■■■ 4.18
TCF12-222	ENST00000561152	KDM6B	O15054	1643 aa		41.09	■■■■■ 4.17
TCF12-222	ENST00000561152	TRO	Q12816	1431 aa	Predicted RBP	41.05	■■■■■ 4.16
TCF12-222	ENST00000561152	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	41.03	■■■■■ 4.16	2e-7	■■■■■ 47.7
TCF12-222	ENST00000561152	KIF14	Q15058	1648 aa		40.99	■■■■■ 4.15
TCF12-222	ENST00000561152	VPS8	Q8N3P4	1428 aa		40.99	■■■■■ 4.15
TCF12-222	ENST00000561152	TTC37	Q6PGP7	1564 aa		40.95	■■■■■ 4.15
TCF12-222	ENST00000561152	PHLDB1	Q86UU1	1377 aa		40.9	■■■■■ 4.14
TCF12-222	ENST00000561152	NEO1	Q92859	1461 aa		40.88	■■■■■ 4.13
TCF12-222	ENST00000561152	CFAP74	Q9C0B2	1584 aa		40.83	■■■■■ 4.13
TCF12-222	ENST00000561152	MYO5C	Q9NQX4	1742 aa		40.83	■■■■■ 4.13
TCF12-222	ENST00000561152	COL17A1	Q9UMD9	1497 aa	Predicted RBP	40.81	■■■■■ 4.12
TCF12-222	ENST00000561152	PLCH2	O75038	1416 aa		40.8	■■■■■ 4.12
TCF12-222	ENST00000561152	MTUS2	Q5JR59	1369 aa		40.8	■■■■■ 4.12
TCF12-222	ENST00000561152	ARAP3	Q8WWN8	1544 aa		40.79	■■■■■ 4.12
TCF12-222	ENST00000561152	FANCA	O15360	1455 aa		40.78	■■■■■ 4.12
TCF12-222	ENST00000561152	EHBP1L1	Q8N3D4	1523 aa		40.72	■■■■■ 4.11
TCF12-222	ENST00000561152	TIAM1	Q13009	1591 aa		40.71	■■■■■ 4.11
TCF12-222	ENST00000561152	AKNA	Q7Z591	1439 aa		40.69	■■■■■ 4.1
TCF12-222	ENST00000561152	EFCAB2	Q5VUJ9	269 aa		40.67	■■■■■ 4.1
TCF12-222	ENST00000561152	ARHGAP5	Q13017	1502 aa		40.65	■■■■■ 4.1
TCF12-222	ENST00000561152	MAP3K1	Q13233	1512 aa		40.65	■■■■■ 4.1
TCF12-222	ENST00000561152	PREX2	Q70Z35	1606 aa		40.64	■■■■■ 4.1
TCF12-222	ENST00000561152	CDC42BPB	Q9Y5S2	1711 aa		40.6	■■■■■ 4.09
TCF12-222	ENST00000561152	CDC42BPA	Q5VT25	1732 aa		40.59	■■■■■ 4.09

Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms