RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
RABGGTA-219ENST00000560871 JPH4Q96JJ6 628 aa26.17■■□□□ 1.78
RABGGTA-219ENST00000560871 PRG4Q92954 1404 aaPredicted RBP26.14■■□□□ 1.78
RABGGTA-219ENST00000560871 TRHP20396 242 aaPredicted RBP26.13■■□□□ 1.77
RABGGTA-219ENST00000560871 RAPGEF2Q9Y4G8 1499 aa26.11■■□□□ 1.77
RABGGTA-219ENST00000560871 KIAA0586Q9BVV6 1533 aa26.1■■□□□ 1.77
RABGGTA-219ENST00000560871 EEA1Q15075 1411 aa26.09■■□□□ 1.77
RABGGTA-219ENST00000560871 PRXQ9BXM0 1461 aa26.08■■□□□ 1.77
RABGGTA-219ENST00000560871 CSRNP3Q8WYN3 585 aa25.96■■□□□ 1.75
RABGGTA-219ENST00000560871 IQGAP2Q13576 1575 aa25.95■■□□□ 1.74
RABGGTA-219ENST00000560871 CTTNBP2Q8WZ74 1663 aa25.9■■□□□ 1.74
RABGGTA-219ENST00000560871 KIF21BO75037 1637 aa25.86■■□□□ 1.73
RABGGTA-219ENST00000560871 FAM9AQ8IZU1 332 aaPredicted RBP25.85■■□□□ 1.73
RABGGTA-219ENST00000560871 ADCY10Q96PN6 1610 aa25.84■■□□□ 1.73
RABGGTA-219ENST00000560871 UGGT2Q9NYU1 1516 aa25.83■■□□□ 1.72
RABGGTA-219ENST00000560871 CARMIL2Q6F5E8 1435 aa25.81■■□□□ 1.72
RABGGTA-219ENST00000560871 KIF13AQ9H1H9 1805 aa25.79■■□□□ 1.72
RABGGTA-219ENST00000560871 PTPRGP23470 1445 aa25.78■■□□□ 1.72
RABGGTA-219ENST00000560871 TNIKQ9UKE5 1360 aa25.77■■□□□ 1.72
RABGGTA-219ENST00000560871 DISP1Q96F81 1524 aa25.77■■□□□ 1.72
RABGGTA-219ENST00000560871 NPM1P06748 294 aaKnown RBP eCLIP25.75■■□□□ 1.71
RABGGTA-219ENST00000560871 MAPKBP1O60336 1514 aa25.74■■□□□ 1.71
RABGGTA-219ENST00000560871 KIAA0556O60303 1618 aa25.73■■□□□ 1.71
RABGGTA-219ENST00000560871 GOLGA3Q08378 1498 aa25.67■■□□□ 1.7
RABGGTA-219ENST00000560871 TTBK1Q5TCY1 1321 aaPredicted RBP25.66■■□□□ 1.7
RABGGTA-219ENST00000560871 ABCC10Q5T3U5 1492 aa25.66■■□□□ 1.7
RABGGTA-219ENST00000560871 DIP2BQ9P265 1576 aa25.62■■□□□ 1.69
RABGGTA-219ENST00000560871 UHRF1BP1LA0JNW5 1464 aa25.62■■□□□ 1.69
RABGGTA-219ENST00000560871 ABCC2Q92887 1545 aa25.61■■□□□ 1.69
RABGGTA-219ENST00000560871 UACAQ9BZF9 1416 aa25.61■■□□□ 1.69
RABGGTA-219ENST00000560871 SAMD9Q5K651 1589 aa25.61■■□□□ 1.69
RABGGTA-219ENST00000560871 FAM69CQ0P6D2 419 aa25.59■■□□□ 1.69
RABGGTA-219ENST00000560871 KDM5BQ9UGL1 1544 aa25.51■■□□□ 1.67
RABGGTA-219ENST00000560871 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
RABGGTA-219ENST00000560871 EFCAB5A4FU69 1503 aa25.47■■□□□ 1.67
RABGGTA-219ENST00000560871 PLB1Q6P1J6 1458 aa25.47■■□□□ 1.67
RABGGTA-219ENST00000560871 ASXL2Q76L83 1435 aa25.47■■□□□ 1.67
RABGGTA-219ENST00000560871 ZCCHC11Q5TAX3 1644 aaKnown RBP25.47■■□□□ 1.67
RABGGTA-219ENST00000560871 TSPOAP1O95153 1857 aa25.45■■□□□ 1.67
RABGGTA-219ENST00000560871 UBTFP17480 764 aaKnown RBP25.45■■□□□ 1.66
RABGGTA-219ENST00000560871 ABCA8O94911 1581 aa25.43■■□□□ 1.66
RABGGTA-219ENST00000560871 GLI2P10070 1586 aa25.43■■□□□ 1.66
RABGGTA-219ENST00000560871 FHOD3Q2V2M9 1422 aa25.39■■□□□ 1.66
RABGGTA-219ENST00000560871 P3H3Q8IVL6 736 aa25.38■■□□□ 1.65
RABGGTA-219ENST00000560871 ARHGAP35Q9NRY4 1499 aa25.36■■□□□ 1.65
RABGGTA-219ENST00000560871 RANGAP1P46060 587 aaPredicted RBP25.35■■□□□ 1.65
RABGGTA-219ENST00000560871 EPRSP07814 1512 aaKnown RBP25.34■■□□□ 1.65
RABGGTA-219ENST00000560871 PPRC1Q5VV67 1664 aaKnown RBP25.34■■□□□ 1.65
RABGGTA-219ENST00000560871 KDM6BO15054 1643 aa25.3■■□□□ 1.64
RABGGTA-219ENST00000560871 MAP3K4Q9Y6R4 1608 aa25.3■■□□□ 1.64
RABGGTA-219ENST00000560871 RAPGEF6Q8TEU7 1601 aa25.29■■□□□ 1.64
RABGGTA-219ENST00000560871 WDR7Q9Y4E6 1490 aa25.28■■□□□ 1.64
RABGGTA-219ENST00000560871 NUP153P49790 1475 aaKnown RBP25.21■■□□□ 1.63
RABGGTA-219ENST00000560871 ATP10BO94823 1461 aa25.2■■□□□ 1.62
RABGGTA-219ENST00000560871 CLIP1P30622 1438 aa25.19■■□□□ 1.62
RABGGTA-219ENST00000560871 FMN1Q68DA7 1419 aa25.19■■□□□ 1.62
RABGGTA-219ENST00000560871 CFAP43Q8NDM7 1665 aa25.17■■□□□ 1.62
RABGGTA-219ENST00000560871 TEX14Q8IWB6 1497 aa25.15■■□□□ 1.62
RABGGTA-219ENST00000560871 KCNH8Q96L42 1107 aa25.14■■□□□ 1.62
RABGGTA-219ENST00000560871 ARID3CA6NKF2 412 aa25.12■■□□□ 1.61
RABGGTA-219ENST00000560871 CEP162Q5TB80 1403 aa25.12■■□□□ 1.61
RABGGTA-219ENST00000560871 HECW1Q76N89 1606 aa25.1■■□□□ 1.61
RABGGTA-219ENST00000560871 CD109Q6YHK3 1445 aa25.1■■□□□ 1.61
RABGGTA-219ENST00000560871 MAGI3Q5TCQ9 1506 aa25.09■■□□□ 1.61
RABGGTA-219ENST00000560871 LOC105371045A0A1W2PR82 267 aa25.09■■□□□ 1.61
RABGGTA-219ENST00000560871 AEBP2Q6ZN18 517 aaPredicted RBP25.09■■□□□ 1.61
RABGGTA-219ENST00000560871 COL17A1Q9UMD9 1497 aaPredicted RBP25.09■■□□□ 1.61
RABGGTA-219ENST00000560871 PCF11O94913 1555 aaKnown RBP25.07■■□□□ 1.6
RABGGTA-219ENST00000560871 CDK13Q14004 1512 aaKnown RBP25.03■■□□□ 1.6
RABGGTA-219ENST00000560871 ABCA9Q8IUA7 1624 aa25.03■■□□□ 1.6
RABGGTA-219ENST00000560871 CASKIN1Q8WXD9 1431 aa25.02■■□□□ 1.6
RABGGTA-219ENST00000560871 LRRIQ1Q96JM4 1722 aa25■■□□□ 1.59
RABGGTA-219ENST00000560871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25■■□□□ 1.59
RABGGTA-219ENST00000560871 HNRNPUL2Q1KMD3 747 aaKnown RBP25■■□□□ 1.59
RABGGTA-219ENST00000560871 FYCO1Q9BQS8 1478 aa24.99■■□□□ 1.59
RABGGTA-219ENST00000560871 CCDC18Q5T9S5 1454 aa24.92■■□□□ 1.58
RABGGTA-219ENST00000560871 PLEKHD1A6NEE1 506 aa24.92■■□□□ 1.58
RABGGTA-219ENST00000560871 KDM4FA0A1W2PPD8 638 aa24.89■■□□□ 1.58
RABGGTA-219ENST00000560871 ARAP3Q8WWN8 1544 aa24.89■■□□□ 1.57
RABGGTA-219ENST00000560871 ATP1B4Q9UN42 357 aaPredicted RBP24.88■■□□□ 1.57
RABGGTA-219ENST00000560871 PHLDB1Q86UU1 1377 aa24.86■■□□□ 1.57
RABGGTA-219ENST00000560871 NEO1Q92859 1461 aa24.83■■□□□ 1.57
RABGGTA-219ENST00000560871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.83■■□□□ 1.57
RABGGTA-219ENST00000560871 TROQ12816 1431 aaPredicted RBP24.82■■□□□ 1.56
RABGGTA-219ENST00000560871 VPS8Q8N3P4 1428 aa24.82■■□□□ 1.56
RABGGTA-219ENST00000560871 TTC37Q6PGP7 1564 aa24.81■■□□□ 1.56
RABGGTA-219ENST00000560871 KIF14Q15058 1648 aa24.79■■□□□ 1.56
RABGGTA-219ENST00000560871 CDK11AQ9UQ88 783 aaPredicted RBP24.77■■□□□ 1.56
RABGGTA-219ENST00000560871 ADGRL1O94910 1474 aa24.77■■□□□ 1.56
RABGGTA-219ENST00000560871 CFAP74Q9C0B2 1584 aa24.73■■□□□ 1.55
RABGGTA-219ENST00000560871 FRMPD1Q5SYB0 1578 aa24.71■■□□□ 1.55
RABGGTA-219ENST00000560871 RAPGEF3O95398 923 aa24.71■■□□□ 1.55
RABGGTA-219ENST00000560871 FANCAO15360 1455 aa24.7■■□□□ 1.55
RABGGTA-219ENST00000560871 AKNAQ7Z591 1439 aa24.69■■□□□ 1.54
RABGGTA-219ENST00000560871 TIAM1Q13009 1591 aa24.67■■□□□ 1.54
RABGGTA-219ENST00000560871 RICTORQ6R327 1708 aa24.67■■□□□ 1.54
RABGGTA-219ENST00000560871 MYO5CQ9NQX4 1742 aa24.66■■□□□ 1.54
RABGGTA-219ENST00000560871 EHBP1L1Q8N3D4 1523 aa24.66■■□□□ 1.54
RABGGTA-219ENST00000560871 PLCH2O75038 1416 aa24.66■■□□□ 1.54
RABGGTA-219ENST00000560871 DENND4BO75064 1496 aaPredicted RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms