RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 NISCHQ9Y2I1 1504 aa37.72■■■■□ 3.63
RABGGTA-219ENST00000560871 CCDC180Q9P1Z9 1646 aa33.65■■■□□ 2.98
RABGGTA-219ENST00000560871 ABCC9O60706 1549 aa33.21■■■□□ 2.91
RABGGTA-219ENST00000560871 RB1CC1Q8TDY2 1594 aa31.82■■■□□ 2.68
RABGGTA-219ENST00000560871 NACADO15069 1562 aa31.69■■■□□ 2.66
RABGGTA-219ENST00000560871 DCAF8L2P0C7V8 631 aa31.51■■■□□ 2.63
RABGGTA-219ENST00000560871 ZCCHC6Q5VYS8 1495 aaKnown RBP31.5■■■□□ 2.63
RABGGTA-219ENST00000560871 MYO15BQ96JP2 1530 aa31.39■■■□□ 2.62
RABGGTA-219ENST00000560871 DCAF1Q9Y4B6 1507 aa31.26■■■□□ 2.59
RABGGTA-219ENST00000560871 UNC13AQ9UPW8 1703 aa31.18■■■□□ 2.58
RABGGTA-219ENST00000560871 PABPN1Q86U42 306 aaKnown RBP eCLIP30.95■■■□□ 2.559e-10■■□□□ 11.4
RABGGTA-219ENST00000560871 BICRAQ9NZM4 1560 aa30.9■■■□□ 2.54
RABGGTA-219ENST00000560871 DNAJC5BQ9UF47 199 aa30.85■■■□□ 2.53
RABGGTA-219ENST00000560871 SCRIBQ14160 1630 aa30.62■■■□□ 2.49
RABGGTA-219ENST00000560871 SHROOM4Q9ULL8 1493 aa30.5■■■□□ 2.47
RABGGTA-219ENST00000560871 EIF4G1Q04637 1599 aaKnown RBP30.08■■■□□ 2.41
RABGGTA-219ENST00000560871 CC2D2AQ9P2K1 1620 aa30.07■■■□□ 2.4
RABGGTA-219ENST00000560871 CECR2Q9BXF3 1484 aa29.88■■■□□ 2.37
RABGGTA-219ENST00000560871 SMARCA4P51532 1647 aa29.28■■■□□ 2.28
RABGGTA-219ENST00000560871 NCAPD3P42695 1498 aa29.24■■■□□ 2.27
RABGGTA-219ENST00000560871 BAZ1AQ9NRL2 1556 aaPredicted RBP29.23■■■□□ 2.27
RABGGTA-219ENST00000560871 ATAD2BQ9ULI0 1458 aa29.2■■■□□ 2.26
RABGGTA-219ENST00000560871 SMARCA2P51531 1590 aa29.14■■■□□ 2.26
RABGGTA-219ENST00000560871 MROH2BQ7Z745 1585 aa29.08■■■□□ 2.25
RABGGTA-219ENST00000560871 HMGXB3Q12766 1538 aa29.07■■■□□ 2.24
RABGGTA-219ENST00000560871 PEG3Q9GZU2 1588 aa29.01■■■□□ 2.24
RABGGTA-219ENST00000560871 BAZ1BQ9UIG0 1483 aaKnown RBP28.91■■■□□ 2.22
RABGGTA-219ENST00000560871 RSF1Q96T23 1441 aaPredicted RBP28.77■■■□□ 2.2
RABGGTA-219ENST00000560871 WIZO95785 1651 aa28.76■■■□□ 2.19
RABGGTA-219ENST00000560871 NESP48681 1621 aa28.65■■■□□ 2.18
RABGGTA-219ENST00000560871 ERCC6Q03468 1493 aa28.62■■■□□ 2.17
RABGGTA-219ENST00000560871 LAMC3Q9Y6N6 1575 aa28.54■■■□□ 2.16
RABGGTA-219ENST00000560871 CUX2O14529 1486 aa28.5■■■□□ 2.15
RABGGTA-219ENST00000560871 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
RABGGTA-219ENST00000560871 CADPSQ9ULU8 1353 aa28.36■■■□□ 2.13
RABGGTA-219ENST00000560871 KIF21AQ7Z4S6 1674 aa28.35■■■□□ 2.13
RABGGTA-219ENST00000560871 THOC2Q8NI27 1593 aaKnown RBP28.33■■■□□ 2.12
RABGGTA-219ENST00000560871 PDS5BQ9NTI5 1447 aa28.32■■■□□ 2.12
RABGGTA-219ENST00000560871 CFTRP13569 1480 aa28.12■■■□□ 2.09
RABGGTA-219ENST00000560871 CCDC88BA6NC98 1476 aa28.11■■■□□ 2.09
RABGGTA-219ENST00000560871 DNAJC5Q9H3Z4 198 aa28.06■■■□□ 2.08
RABGGTA-219ENST00000560871 MRC2Q9UBG0 1479 aa28.06■■■□□ 2.08
RABGGTA-219ENST00000560871 FANCD2Q9BXW9 1451 aa28.02■■■□□ 2.08
RABGGTA-219ENST00000560871 CEP164Q9UPV0 1460 aa28.02■■■□□ 2.08
RABGGTA-219ENST00000560871 WDR62O43379 1518 aa28■■■□□ 2.07
RABGGTA-219ENST00000560871 PRDM2Q13029 1718 aa27.96■■■□□ 2.07
RABGGTA-219ENST00000560871 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
RABGGTA-219ENST00000560871 URB2Q14146 1524 aaKnown RBP27.79■■■□□ 2.04
RABGGTA-219ENST00000560871 TOPBP1Q92547 1522 aa27.56■■■□□ 2
RABGGTA-219ENST00000560871 ABCC8Q09428 1581 aa27.53■■■□□ 2
RABGGTA-219ENST00000560871 DNMBPQ6XZF7 1577 aa27.49■■□□□ 1.99
RABGGTA-219ENST00000560871 IFT140Q96RY7 1462 aa27.46■■□□□ 1.99
RABGGTA-219ENST00000560871 ZNF608Q9ULD9 1512 aaPredicted RBP27.37■■□□□ 1.97
RABGGTA-219ENST00000560871 TARBP1Q13395 1621 aaKnown RBP27.31■■□□□ 1.96
RABGGTA-219ENST00000560871 POLA1P09884 1462 aaPredicted RBP27.29■■□□□ 1.96
RABGGTA-219ENST00000560871 CUX1P39880 1505 aa27.28■■□□□ 1.96
RABGGTA-219ENST00000560871 EIF4G3O43432 1585 aaKnown RBP27.26■■□□□ 1.96
RABGGTA-219ENST00000560871 OSCARQ8IYS5 282 aa27.24■■□□□ 1.95
RABGGTA-219ENST00000560871 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
RABGGTA-219ENST00000560871 RAD54L2Q9Y4B4 1467 aa27.17■■□□□ 1.94
RABGGTA-219ENST00000560871 SOGA1O94964 1423 aa27.16■■□□□ 1.94
RABGGTA-219ENST00000560871 AQRO60306 1485 aaKnown RBP eCLIP27.16■■□□□ 1.943e-7■□□□□ 9.2
RABGGTA-219ENST00000560871 WRNQ14191 1432 aaPredicted RBP eCLIP27.1■■□□□ 1.93
RABGGTA-219ENST00000560871 BIVM-ERCC5R4GMW8 1640 aa27.09■■□□□ 1.93
RABGGTA-219ENST00000560871 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
RABGGTA-219ENST00000560871 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
RABGGTA-219ENST00000560871 WDR97A6NE52 1622 aa27.07■■□□□ 1.92
RABGGTA-219ENST00000560871 TDRD9Q8NDG6 1382 aaKnown RBP27.05■■□□□ 1.92
RABGGTA-219ENST00000560871 CHD1O14646 1710 aa27.03■■□□□ 1.92
RABGGTA-219ENST00000560871 TRIM41Q8WV44 630 aa26.92■■□□□ 1.9
RABGGTA-219ENST00000560871 ABCA10Q8WWZ4 1543 aa26.9■■□□□ 1.9
RABGGTA-219ENST00000560871 GRIN2BQ13224 1484 aa26.89■■□□□ 1.9
RABGGTA-219ENST00000560871 SNAPC4Q5SXM2 1469 aa26.89■■□□□ 1.9
RABGGTA-219ENST00000560871 RIMBP3CA6NJZ7 1639 aa26.89■■□□□ 1.9
RABGGTA-219ENST00000560871 RIMBP3BA6NNM3 1639 aa26.89■■□□□ 1.9
RABGGTA-219ENST00000560871 RIMBP3Q9UFD9 1639 aa26.89■■□□□ 1.9
RABGGTA-219ENST00000560871 PBRM1Q86U86 1689 aa26.87■■□□□ 1.89
RABGGTA-219ENST00000560871 FBLN2P98095 1184 aa26.87■■□□□ 1.89
RABGGTA-219ENST00000560871 MAGI1Q96QZ7 1491 aaPredicted RBP26.86■■□□□ 1.89
RABGGTA-219ENST00000560871 ABCA5Q8WWZ7 1642 aa26.84■■□□□ 1.89
RABGGTA-219ENST00000560871 GAPVD1Q14C86 1478 aa26.84■■□□□ 1.89
RABGGTA-219ENST00000560871 ARHGEF11O15085 1522 aa26.81■■□□□ 1.88
RABGGTA-219ENST00000560871 CHMP7Q8WUX9 453 aaPredicted RBP26.76■■□□□ 1.87
RABGGTA-219ENST00000560871 SYNJ2O15056 1496 aa26.75■■□□□ 1.87
RABGGTA-219ENST00000560871 CLASP1Q7Z460 1538 aa26.7■■□□□ 1.86
RABGGTA-219ENST00000560871 ADAMTS12P58397 1594 aa26.59■■□□□ 1.85
RABGGTA-219ENST00000560871 ERICH3Q5RHP9 1530 aa26.59■■□□□ 1.85
RABGGTA-219ENST00000560871 ARAP1Q96P48 1450 aa26.57■■□□□ 1.84
RABGGTA-219ENST00000560871 CYB5RLQ6IPT4 315 aa26.56■■□□□ 1.84
RABGGTA-219ENST00000560871 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
RABGGTA-219ENST00000560871 FHAD1B1AJZ9 1412 aa26.52■■□□□ 1.84
RABGGTA-219ENST00000560871 KIF27Q86VH2 1401 aa26.51■■□□□ 1.83
RABGGTA-219ENST00000560871 NUP160Q12769 1436 aa26.45■■□□□ 1.82
RABGGTA-219ENST00000560871 CEP170Q5SW79 1584 aa26.45■■□□□ 1.82
RABGGTA-219ENST00000560871 IGF1RP08069 1367 aa26.38■■□□□ 1.81
RABGGTA-219ENST00000560871 CUL7Q14999 1698 aa26.37■■□□□ 1.81
RABGGTA-219ENST00000560871 SHROOM2Q13796 1616 aa26.33■■□□□ 1.81
RABGGTA-219ENST00000560871 RUSC2Q8N2Y8 1516 aa26.33■■□□□ 1.81
RABGGTA-219ENST00000560871 ERCC6L2Q5T890 1561 aa26.3■■□□□ 1.8
RABGGTA-219ENST00000560871 CARMIL1Q5VZK9 1371 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms