RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 FAM69CQ0P6D2 419 aa29.93■■■□□ 2.38
HERC1-207ENST00000560316 ABCC10Q5T3U5 1492 aa29.87■■■□□ 2.37
HERC1-207ENST00000560316 NPM1P06748 294 aaKnown RBP eCLIP29.85■■■□□ 2.37
HERC1-207ENST00000560316 RUSC2Q8N2Y8 1516 aa29.84■■■□□ 2.37
HERC1-207ENST00000560316 MAPKBP1O60336 1514 aa29.79■■■□□ 2.36
HERC1-207ENST00000560316 DIP2BQ9P265 1576 aa29.77■■■□□ 2.36
HERC1-207ENST00000560316 ADCY10Q96PN6 1610 aa29.77■■■□□ 2.36
HERC1-207ENST00000560316 KDM4FA0A1W2PPD8 638 aa29.69■■■□□ 2.34
HERC1-207ENST00000560316 KDM6BO15054 1643 aa29.67■■■□□ 2.34
HERC1-207ENST00000560316 KIAA0586Q9BVV6 1533 aa29.64■■■□□ 2.34
HERC1-207ENST00000560316 TSPOAP1O95153 1857 aa29.62■■■□□ 2.33
HERC1-207ENST00000560316 IGF1RP08069 1367 aa29.58■■■□□ 2.33
HERC1-207ENST00000560316 TTBK1Q5TCY1 1321 aaPredicted RBP29.52■■■□□ 2.32
HERC1-207ENST00000560316 PTPRGP23470 1445 aa29.5■■■□□ 2.31
HERC1-207ENST00000560316 KIF27Q86VH2 1401 aa29.48■■■□□ 2.31
HERC1-207ENST00000560316 CUL7Q14999 1698 aa29.47■■■□□ 2.31
HERC1-207ENST00000560316 ABCC2Q92887 1545 aa29.4■■■□□ 2.3
HERC1-207ENST00000560316 TNIKQ9UKE5 1360 aa29.39■■■□□ 2.29
HERC1-207ENST00000560316 ASXL2Q76L83 1435 aa29.38■■■□□ 2.29
HERC1-207ENST00000560316 CARMIL1Q5VZK9 1371 aa29.37■■■□□ 2.29
HERC1-207ENST00000560316 ILDR1Q86SU0 546 aaPredicted RBP29.36■■■□□ 2.29
HERC1-207ENST00000560316 CARMIL2Q6F5E8 1435 aa29.36■■■□□ 2.29
HERC1-207ENST00000560316 PPRC1Q5VV67 1664 aaKnown RBP29.34■■■□□ 2.29
HERC1-207ENST00000560316 PLB1Q6P1J6 1458 aa29.33■■■□□ 2.29
HERC1-207ENST00000560316 GLI2P10070 1586 aa29.31■■■□□ 2.28
HERC1-207ENST00000560316 ADGRL1O94910 1474 aa29.29■■■□□ 2.28
HERC1-207ENST00000560316 IQGAP2Q13576 1575 aa29.26■■■□□ 2.28
HERC1-207ENST00000560316 UHRF1BP1LA0JNW5 1464 aa29.26■■■□□ 2.27
HERC1-207ENST00000560316 UACAQ9BZF9 1416 aa29.25■■■□□ 2.27
HERC1-207ENST00000560316 COL17A1Q9UMD9 1497 aaPredicted RBP29.23■■■□□ 2.27
HERC1-207ENST00000560316 DISP1Q96F81 1524 aa29.2■■■□□ 2.26
HERC1-207ENST00000560316 EPRSP07814 1512 aaKnown RBP29.19■■■□□ 2.26
HERC1-207ENST00000560316 KDM5BQ9UGL1 1544 aa29.15■■■□□ 2.26
HERC1-207ENST00000560316 MAP3K4Q9Y6R4 1608 aa29.14■■■□□ 2.26
HERC1-207ENST00000560316 TEX14Q8IWB6 1497 aa29.1■■■□□ 2.25
HERC1-207ENST00000560316 ZCCHC11Q5TAX3 1644 aaKnown RBP29.09■■■□□ 2.25
HERC1-207ENST00000560316 UGGT2Q9NYU1 1516 aa29.06■■■□□ 2.24
HERC1-207ENST00000560316 HECW2Q9P2P5 1572 aa29.05■■■□□ 2.24
HERC1-207ENST00000560316 KIAA0556O60303 1618 aa29.02■■■□□ 2.24
HERC1-207ENST00000560316 RAPGEF2Q9Y4G8 1499 aa29.01■■■□□ 2.23
HERC1-207ENST00000560316 WDR7Q9Y4E6 1490 aa28.97■■■□□ 2.23
HERC1-207ENST00000560316 KCNH8Q96L42 1107 aa28.89■■■□□ 2.22
HERC1-207ENST00000560316 CD109Q6YHK3 1445 aa28.88■■■□□ 2.21
HERC1-207ENST00000560316 MAGI3Q5TCQ9 1506 aa28.85■■■□□ 2.21
HERC1-207ENST00000560316 CFAP43Q8NDM7 1665 aa28.81■■■□□ 2.2
HERC1-207ENST00000560316 ABCA8O94911 1581 aa28.79■■■□□ 2.2
HERC1-207ENST00000560316 CTTNBP2Q8WZ74 1663 aa28.77■■■□□ 2.2
HERC1-207ENST00000560316 GOLGA3Q08378 1498 aa28.76■■■□□ 2.19
HERC1-207ENST00000560316 KIF21BO75037 1637 aa28.74■■■□□ 2.19
HERC1-207ENST00000560316 ARID3CA6NKF2 412 aa28.68■■■□□ 2.18
HERC1-207ENST00000560316 ARAP3Q8WWN8 1544 aa28.64■■■□□ 2.18
HERC1-207ENST00000560316 FBXO41Q8TF61 875 aa28.59■■■□□ 2.17
HERC1-207ENST00000560316 P3H3Q8IVL6 736 aa28.58■■■□□ 2.17
HERC1-207ENST00000560316 ATP10BO94823 1461 aa28.58■■■□□ 2.17
HERC1-207ENST00000560316 PRXQ9BXM0 1461 aa28.57■■■□□ 2.16
HERC1-207ENST00000560316 PTPRMP28827 1452 aa28.55■■■□□ 2.16
HERC1-207ENST00000560316 RAPGEF3O95398 923 aa28.53■■■□□ 2.16
HERC1-207ENST00000560316 ADAMTSL3P82987 1691 aa28.52■■■□□ 2.16
HERC1-207ENST00000560316 FAM9AQ8IZU1 332 aaPredicted RBP28.51■■■□□ 2.15
HERC1-207ENST00000560316 ABCA9Q8IUA7 1624 aa28.5■■■□□ 2.15
HERC1-207ENST00000560316 PHLDB1Q86UU1 1377 aa28.5■■■□□ 2.15
HERC1-207ENST00000560316 ARID4BQ4LE39 1312 aaPredicted RBP28.43■■■□□ 2.14
HERC1-207ENST00000560316 NEO1Q92859 1461 aa28.42■■■□□ 2.14
HERC1-207ENST00000560316 BCORL1Q5H9F3 1711 aa28.4■■■□□ 2.14
HERC1-207ENST00000560316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.4■■■□□ 2.14
HERC1-207ENST00000560316 HNRNPUL2Q1KMD3 747 aaKnown RBP28.4■■■□□ 2.14
HERC1-207ENST00000560316 FRMPD1Q5SYB0 1578 aa28.39■■■□□ 2.14
HERC1-207ENST00000560316 MADDQ8WXG6 1647 aa28.39■■■□□ 2.13
HERC1-207ENST00000560316 PCF11O94913 1555 aaKnown RBP28.37■■■□□ 2.13
HERC1-207ENST00000560316 RAPGEF6Q8TEU7 1601 aa28.36■■■□□ 2.13
HERC1-207ENST00000560316 SAMD9Q5K651 1589 aa28.35■■■□□ 2.13
HERC1-207ENST00000560316 LMTK3Q96Q04 1460 aa28.34■■■□□ 2.13
HERC1-207ENST00000560316 NUP153P49790 1475 aaKnown RBP28.28■■■□□ 2.12
HERC1-207ENST00000560316 RIMS1Q86UR5 1692 aaKnown RBP28.27■■■□□ 2.12
HERC1-207ENST00000560316 RANGAP1P46060 587 aaPredicted RBP28.26■■■□□ 2.11
HERC1-207ENST00000560316 ARHGEF40Q8TER5 1519 aa28.26■■■□□ 2.11
HERC1-207ENST00000560316 DENND4BO75064 1496 aaPredicted RBP28.24■■■□□ 2.11
HERC1-207ENST00000560316 PLPPR3Q6T4P5 718 aa28.24■■■□□ 2.11
HERC1-207ENST00000560316 HSPA2P54652 639 aa28.23■■■□□ 2.11
HERC1-207ENST00000560316 CSRNP3Q8WYN3 585 aa28.23■■■□□ 2.11
HERC1-207ENST00000560316 AKNAQ7Z591 1439 aa28.21■■■□□ 2.11
HERC1-207ENST00000560316 RICTORQ6R327 1708 aa28.21■■■□□ 2.11
HERC1-207ENST00000560316 FHOD3Q2V2M9 1422 aa28.2■■■□□ 2.11
HERC1-207ENST00000560316 PLEKHD1A6NEE1 506 aa28.19■■■□□ 2.1
HERC1-207ENST00000560316 FANCAO15360 1455 aa28.17■■■□□ 2.1
HERC1-207ENST00000560316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.13■■■□□ 2.09
HERC1-207ENST00000560316 POGZQ7Z3K3 1410 aa28.12■■■□□ 2.09
HERC1-207ENST00000560316 YEATS2Q9ULM3 1422 aa28.12■■■□□ 2.09
HERC1-207ENST00000560316 SIGLEC1Q9BZZ2 1709 aa28.12■■■□□ 2.09
HERC1-207ENST00000560316 CFAP74Q9C0B2 1584 aa28.11■■■□□ 2.09
HERC1-207ENST00000560316 MLECQ14165 292 aa28.1■■■□□ 2.09
HERC1-207ENST00000560316 ZMYM4Q5VZL5 1548 aa28.09■■■□□ 2.09
HERC1-207ENST00000560316 ZFYVE16Q7Z3T8 1539 aa28.09■■■□□ 2.09
HERC1-207ENST00000560316 TTC37Q6PGP7 1564 aa28.09■■■□□ 2.09
HERC1-207ENST00000560316 CERKQ8TCT0 537 aa28.06■■■□□ 2.08
HERC1-207ENST00000560316 EFCAB5A4FU69 1503 aa28.06■■■□□ 2.08
HERC1-207ENST00000560316 HECW1Q76N89 1606 aa28.03■■■□□ 2.08
HERC1-207ENST00000560316 MAGI2Q86UL8 1455 aa28.02■■■□□ 2.08
HERC1-207ENST00000560316 FER1L4A9Z1Z3 1794 aa27.99■■■□□ 2.07
HERC1-207ENST00000560316 SCAPERQ9BY12 1400 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms