RNA–Protein interactions for RNA: ENST00000560054.5

AC104041.1-201, humanhuman

TSL 5 BASIC

Gene AC104041.1, Length 569 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-201ENST00000560054 SHROOM2Q13796 1616 aa16.81■□□□□ 0.28
AC104041.1-201ENST00000560054 JPH4Q96JJ6 628 aa16.8■□□□□ 0.28
AC104041.1-201ENST00000560054 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
AC104041.1-201ENST00000560054 PRG4Q92954 1404 aaPredicted RBP16.76■□□□□ 0.27
AC104041.1-201ENST00000560054 CUL7Q14999 1698 aa16.74■□□□□ 0.27
AC104041.1-201ENST00000560054 CARMIL1Q5VZK9 1371 aa16.74■□□□□ 0.27
AC104041.1-201ENST00000560054 RUSC2Q8N2Y8 1516 aa16.73■□□□□ 0.27
AC104041.1-201ENST00000560054 KIAA0586Q9BVV6 1533 aa16.71■□□□□ 0.27
AC104041.1-201ENST00000560054 FOXD1Q16676 465 aa16.62■□□□□ 0.25
AC104041.1-201ENST00000560054 RAPGEF2Q9Y4G8 1499 aa16.6■□□□□ 0.25
AC104041.1-201ENST00000560054 IQGAP2Q13576 1575 aa16.54■□□□□ 0.24
AC104041.1-201ENST00000560054 NPM1P06748 294 aaKnown RBP eCLIP16.53■□□□□ 0.24
AC104041.1-201ENST00000560054 PTPRGP23470 1445 aa16.53■□□□□ 0.24
AC104041.1-201ENST00000560054 CARMIL2Q6F5E8 1435 aa16.53■□□□□ 0.24
AC104041.1-201ENST00000560054 ADCY10Q96PN6 1610 aa16.51■□□□□ 0.23
AC104041.1-201ENST00000560054 TNIKQ9UKE5 1360 aa16.51■□□□□ 0.23
AC104041.1-201ENST00000560054 DISP1Q96F81 1524 aa16.49■□□□□ 0.23
AC104041.1-201ENST00000560054 PRXQ9BXM0 1461 aa16.48■□□□□ 0.23
AC104041.1-201ENST00000560054 TTBK1Q5TCY1 1321 aaPredicted RBP16.48■□□□□ 0.23
AC104041.1-201ENST00000560054 UGGT2Q9NYU1 1516 aa16.47■□□□□ 0.23
AC104041.1-201ENST00000560054 MAPKBP1O60336 1514 aa16.46■□□□□ 0.23
AC104041.1-201ENST00000560054 ABCC10Q5T3U5 1492 aa16.43■□□□□ 0.22
AC104041.1-201ENST00000560054 FAM69CQ0P6D2 419 aa16.43■□□□□ 0.22
AC104041.1-201ENST00000560054 CSRNP3Q8WYN3 585 aa16.43■□□□□ 0.22
AC104041.1-201ENST00000560054 KIF13AQ9H1H9 1805 aa16.42■□□□□ 0.22
AC104041.1-201ENST00000560054 UACAQ9BZF9 1416 aa16.41■□□□□ 0.22
AC104041.1-201ENST00000560054 UHRF1BP1LA0JNW5 1464 aa16.4■□□□□ 0.22
AC104041.1-201ENST00000560054 ABCC2Q92887 1545 aa16.4■□□□□ 0.22
AC104041.1-201ENST00000560054 KIAA0556O60303 1618 aa16.39■□□□□ 0.21
AC104041.1-201ENST00000560054 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
AC104041.1-201ENST00000560054 DIP2BQ9P265 1576 aa16.37■□□□□ 0.21
AC104041.1-201ENST00000560054 EEA1Q15075 1411 aa16.36■□□□□ 0.21
AC104041.1-201ENST00000560054 GOLGA3Q08378 1498 aa16.35■□□□□ 0.21
AC104041.1-201ENST00000560054 ASXL2Q76L83 1435 aa16.33■□□□□ 0.2
AC104041.1-201ENST00000560054 KDM5BQ9UGL1 1544 aa16.32■□□□□ 0.2
AC104041.1-201ENST00000560054 PLB1Q6P1J6 1458 aa16.31■□□□□ 0.2
AC104041.1-201ENST00000560054 FAM9AQ8IZU1 332 aaPredicted RBP16.3■□□□□ 0.2
AC104041.1-201ENST00000560054 P3H3Q8IVL6 736 aa16.26■□□□□ 0.19
AC104041.1-201ENST00000560054 ZCCHC11Q5TAX3 1644 aaKnown RBP16.25■□□□□ 0.19
AC104041.1-201ENST00000560054 ABCA8O94911 1581 aa16.25■□□□□ 0.19
AC104041.1-201ENST00000560054 GLI2P10070 1586 aa16.25■□□□□ 0.19
AC104041.1-201ENST00000560054 EPRSP07814 1512 aaKnown RBP16.22■□□□□ 0.19
AC104041.1-201ENST00000560054 TSPOAP1O95153 1857 aa16.21■□□□□ 0.19
AC104041.1-201ENST00000560054 SAMD9Q5K651 1589 aa16.2■□□□□ 0.18
AC104041.1-201ENST00000560054 WDR7Q9Y4E6 1490 aa16.19■□□□□ 0.18
AC104041.1-201ENST00000560054 KIF21BO75037 1637 aa16.19■□□□□ 0.18
AC104041.1-201ENST00000560054 RANGAP1P46060 587 aaPredicted RBP16.18■□□□□ 0.18
AC104041.1-201ENST00000560054 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
AC104041.1-201ENST00000560054 KDM6BO15054 1643 aa16.16■□□□□ 0.18
AC104041.1-201ENST00000560054 PPRC1Q5VV67 1664 aaKnown RBP16.16■□□□□ 0.18
AC104041.1-201ENST00000560054 KCNH8Q96L42 1107 aa16.15■□□□□ 0.18
AC104041.1-201ENST00000560054 MAP3K4Q9Y6R4 1608 aa16.15■□□□□ 0.18
AC104041.1-201ENST00000560054 ARID3CA6NKF2 412 aa16.14■□□□□ 0.17
AC104041.1-201ENST00000560054 ATP10BO94823 1461 aa16.14■□□□□ 0.17
AC104041.1-201ENST00000560054 FHOD3Q2V2M9 1422 aa16.11■□□□□ 0.17
AC104041.1-201ENST00000560054 UBTFP17480 764 aaKnown RBP16.11■□□□□ 0.17
AC104041.1-201ENST00000560054 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
AC104041.1-201ENST00000560054 TEX14Q8IWB6 1497 aa16.1■□□□□ 0.17
AC104041.1-201ENST00000560054 CD109Q6YHK3 1445 aa16.09■□□□□ 0.17
AC104041.1-201ENST00000560054 COL17A1Q9UMD9 1497 aaPredicted RBP16.09■□□□□ 0.17
AC104041.1-201ENST00000560054 RAPGEF6Q8TEU7 1601 aa16.08■□□□□ 0.17
AC104041.1-201ENST00000560054 EFCAB5A4FU69 1503 aa16.08■□□□□ 0.16
AC104041.1-201ENST00000560054 MAGI3Q5TCQ9 1506 aa16.06■□□□□ 0.16
AC104041.1-201ENST00000560054 NUP153P49790 1475 aaKnown RBP16.06■□□□□ 0.16
AC104041.1-201ENST00000560054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.05■□□□□ 0.16
AC104041.1-201ENST00000560054 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
AC104041.1-201ENST00000560054 CFAP43Q8NDM7 1665 aa16.04■□□□□ 0.16
AC104041.1-201ENST00000560054 KDM4FA0A1W2PPD8 638 aa15.99■□□□□ 0.15
AC104041.1-201ENST00000560054 PLEKHD1A6NEE1 506 aa15.99■□□□□ 0.15
AC104041.1-201ENST00000560054 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
AC104041.1-201ENST00000560054 ABCA9Q8IUA7 1624 aa15.97■□□□□ 0.15
AC104041.1-201ENST00000560054 FMN1Q68DA7 1419 aa15.95■□□□□ 0.14
AC104041.1-201ENST00000560054 ARAP3Q8WWN8 1544 aa15.94■□□□□ 0.14
AC104041.1-201ENST00000560054 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
AC104041.1-201ENST00000560054 CDK13Q14004 1512 aaKnown RBP15.91■□□□□ 0.14
AC104041.1-201ENST00000560054 ATP1B4Q9UN42 357 aaPredicted RBP15.91■□□□□ 0.14
AC104041.1-201ENST00000560054 NEO1Q92859 1461 aa15.9■□□□□ 0.14
AC104041.1-201ENST00000560054 RAPGEF3O95398 923 aa15.87■□□□□ 0.13
AC104041.1-201ENST00000560054 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.87■□□□□ 0.13
AC104041.1-201ENST00000560054 HECW1Q76N89 1606 aa15.86■□□□□ 0.13
AC104041.1-201ENST00000560054 ADGRL1O94910 1474 aa15.86■□□□□ 0.13
AC104041.1-201ENST00000560054 CDK11AQ9UQ88 783 aaPredicted RBP15.85■□□□□ 0.13
AC104041.1-201ENST00000560054 TTC37Q6PGP7 1564 aa15.83■□□□□ 0.12
AC104041.1-201ENST00000560054 AKNAQ7Z591 1439 aa15.82■□□□□ 0.12
AC104041.1-201ENST00000560054 FANCAO15360 1455 aa15.82■□□□□ 0.12
AC104041.1-201ENST00000560054 CASKIN1Q8WXD9 1431 aa15.81■□□□□ 0.12
AC104041.1-201ENST00000560054 PLCH2O75038 1416 aa15.8■□□□□ 0.12
AC104041.1-201ENST00000560054 CLIP1P30622 1438 aa15.8■□□□□ 0.12
AC104041.1-201ENST00000560054 TROQ12816 1431 aaPredicted RBP15.79■□□□□ 0.12
AC104041.1-201ENST00000560054 FRMPD1Q5SYB0 1578 aa15.79■□□□□ 0.12
AC104041.1-201ENST00000560054 DENND4BO75064 1496 aaPredicted RBP15.78■□□□□ 0.12
AC104041.1-201ENST00000560054 LRRIQ1Q96JM4 1722 aa15.77■□□□□ 0.11
AC104041.1-201ENST00000560054 PCF11O94913 1555 aaKnown RBP15.76■□□□□ 0.11
AC104041.1-201ENST00000560054 CFAP74Q9C0B2 1584 aa15.76■□□□□ 0.11
AC104041.1-201ENST00000560054 EFCAB2Q5VUJ9 269 aa15.75■□□□□ 0.11
AC104041.1-201ENST00000560054 CCDC18Q5T9S5 1454 aa15.75■□□□□ 0.11
AC104041.1-201ENST00000560054 KIF14Q15058 1648 aa15.74■□□□□ 0.11
AC104041.1-201ENST00000560054 FYCO1Q9BQS8 1478 aa15.73■□□□□ 0.11
AC104041.1-201ENST00000560054 SCAPERQ9BY12 1400 aa15.73■□□□□ 0.11
AC104041.1-201ENST00000560054 RICTORQ6R327 1708 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms