RNA–Protein interactions for RNA: ENST00000560054.5

AC104041.1-201, humanhuman

TSL 5 BASIC

Gene AC104041.1, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-201ENST00000560054 NISCHQ9Y2I1 1504 aa24.06■■□□□ 1.44
AC104041.1-201ENST00000560054 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
AC104041.1-201ENST00000560054 ABCC9O60706 1549 aa21.28■■□□□ 1
AC104041.1-201ENST00000560054 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
AC104041.1-201ENST00000560054 RB1CC1Q8TDY2 1594 aa20.33■□□□□ 0.84
AC104041.1-201ENST00000560054 NACADO15069 1562 aa20.26■□□□□ 0.83
AC104041.1-201ENST00000560054 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
AC104041.1-201ENST00000560054 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
AC104041.1-201ENST00000560054 MYO15BQ96JP2 1530 aa20.07■□□□□ 0.8
AC104041.1-201ENST00000560054 ZCCHC6Q5VYS8 1495 aaKnown RBP19.98■□□□□ 0.79
AC104041.1-201ENST00000560054 DCAF1Q9Y4B6 1507 aa19.88■□□□□ 0.77
AC104041.1-201ENST00000560054 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
AC104041.1-201ENST00000560054 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
AC104041.1-201ENST00000560054 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
AC104041.1-201ENST00000560054 BICRAQ9NZM4 1560 aa19.74■□□□□ 0.75
AC104041.1-201ENST00000560054 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
AC104041.1-201ENST00000560054 SHROOM4Q9ULL8 1493 aa19.49■□□□□ 0.71
AC104041.1-201ENST00000560054 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
AC104041.1-201ENST00000560054 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
AC104041.1-201ENST00000560054 CECR2Q9BXF3 1484 aa19.15■□□□□ 0.66
AC104041.1-201ENST00000560054 NCAPD3P42695 1498 aa18.73■□□□□ 0.59
AC104041.1-201ENST00000560054 SMARCA4P51532 1647 aa18.69■□□□□ 0.58
AC104041.1-201ENST00000560054 ATAD2BQ9ULI0 1458 aa18.69■□□□□ 0.58
AC104041.1-201ENST00000560054 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.58
AC104041.1-201ENST00000560054 SMARCA2P51531 1590 aa18.63■□□□□ 0.57
AC104041.1-201ENST00000560054 HMGXB3Q12766 1538 aa18.57■□□□□ 0.56
AC104041.1-201ENST00000560054 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
AC104041.1-201ENST00000560054 PEG3Q9GZU2 1588 aa18.52■□□□□ 0.56
AC104041.1-201ENST00000560054 BAZ1BQ9UIG0 1483 aaKnown RBP18.51■□□□□ 0.55
AC104041.1-201ENST00000560054 NESP48681 1621 aa18.34■□□□□ 0.53
AC104041.1-201ENST00000560054 ERCC6Q03468 1493 aa18.34■□□□□ 0.53
AC104041.1-201ENST00000560054 WIZO95785 1651 aa18.3■□□□□ 0.52
AC104041.1-201ENST00000560054 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
AC104041.1-201ENST00000560054 CUX2O14529 1486 aa18.24■□□□□ 0.51
AC104041.1-201ENST00000560054 LAMC3Q9Y6N6 1575 aa18.23■□□□□ 0.51
AC104041.1-201ENST00000560054 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
AC104041.1-201ENST00000560054 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
AC104041.1-201ENST00000560054 TOP2AP11388 1531 aaKnown RBP18.09■□□□□ 0.49
AC104041.1-201ENST00000560054 THOC2Q8NI27 1593 aaKnown RBP18.08■□□□□ 0.48
AC104041.1-201ENST00000560054 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
AC104041.1-201ENST00000560054 DNAJC5Q9H3Z4 198 aa18.05■□□□□ 0.48
AC104041.1-201ENST00000560054 CFTRP13569 1480 aa18.01■□□□□ 0.47
AC104041.1-201ENST00000560054 MRC2Q9UBG0 1479 aa17.96■□□□□ 0.47
AC104041.1-201ENST00000560054 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
AC104041.1-201ENST00000560054 CEP164Q9UPV0 1460 aa17.93■□□□□ 0.46
AC104041.1-201ENST00000560054 CCDC88BA6NC98 1476 aa17.91■□□□□ 0.46
AC104041.1-201ENST00000560054 WDR62O43379 1518 aa17.91■□□□□ 0.46
AC104041.1-201ENST00000560054 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
AC104041.1-201ENST00000560054 URB2Q14146 1524 aaKnown RBP17.78■□□□□ 0.44
AC104041.1-201ENST00000560054 PRDM2Q13029 1718 aa17.74■□□□□ 0.43
AC104041.1-201ENST00000560054 PHF23Q9BUL5 403 aaPredicted RBP17.68■□□□□ 0.42
AC104041.1-201ENST00000560054 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
AC104041.1-201ENST00000560054 SUPT5HO00267 1087 aaKnown RBP17.61■□□□□ 0.41
AC104041.1-201ENST00000560054 ABCC8Q09428 1581 aa17.61■□□□□ 0.41
AC104041.1-201ENST00000560054 IFT140Q96RY7 1462 aa17.58■□□□□ 0.41
AC104041.1-201ENST00000560054 DNMBPQ6XZF7 1577 aa17.56■□□□□ 0.4
AC104041.1-201ENST00000560054 ZNF608Q9ULD9 1512 aaPredicted RBP17.54■□□□□ 0.4
AC104041.1-201ENST00000560054 OSCARQ8IYS5 282 aa17.5■□□□□ 0.39
AC104041.1-201ENST00000560054 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
AC104041.1-201ENST00000560054 TARBP1Q13395 1621 aaKnown RBP17.43■□□□□ 0.38
AC104041.1-201ENST00000560054 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.38
AC104041.1-201ENST00000560054 CUX1P39880 1505 aa17.41■□□□□ 0.38
AC104041.1-201ENST00000560054 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
AC104041.1-201ENST00000560054 SOGA1O94964 1423 aa17.4■□□□□ 0.38
AC104041.1-201ENST00000560054 RAD54L2Q9Y4B4 1467 aa17.4■□□□□ 0.38
AC104041.1-201ENST00000560054 FGD5Q6ZNL6 1462 aa17.38■□□□□ 0.37
AC104041.1-201ENST00000560054 TDRD9Q8NDG6 1382 aaKnown RBP17.35■□□□□ 0.37
AC104041.1-201ENST00000560054 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
AC104041.1-201ENST00000560054 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
AC104041.1-201ENST00000560054 FBLN2P98095 1184 aa17.26■□□□□ 0.35
AC104041.1-201ENST00000560054 SNAPC4Q5SXM2 1469 aa17.22■□□□□ 0.35
AC104041.1-201ENST00000560054 CHD1O14646 1710 aa17.21■□□□□ 0.35
AC104041.1-201ENST00000560054 GRIN2BQ13224 1484 aa17.21■□□□□ 0.35
AC104041.1-201ENST00000560054 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.34
AC104041.1-201ENST00000560054 ABCA10Q8WWZ4 1543 aa17.2■□□□□ 0.34
AC104041.1-201ENST00000560054 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
AC104041.1-201ENST00000560054 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
AC104041.1-201ENST00000560054 RIMBP3CA6NJZ7 1639 aa17.18■□□□□ 0.34
AC104041.1-201ENST00000560054 RIMBP3BA6NNM3 1639 aa17.18■□□□□ 0.34
AC104041.1-201ENST00000560054 RIMBP3Q9UFD9 1639 aa17.18■□□□□ 0.34
AC104041.1-201ENST00000560054 CHMP7Q8WUX9 453 aaPredicted RBP17.18■□□□□ 0.34
AC104041.1-201ENST00000560054 ARHGEF11O15085 1522 aa17.16■□□□□ 0.34
AC104041.1-201ENST00000560054 TOP2BQ02880 1626 aa17.16■□□□□ 0.34
AC104041.1-201ENST00000560054 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
AC104041.1-201ENST00000560054 BIVM-ERCC5R4GMW8 1640 aa17.15■□□□□ 0.34
AC104041.1-201ENST00000560054 SYNJ2O15056 1496 aa17.13■□□□□ 0.33
AC104041.1-201ENST00000560054 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
AC104041.1-201ENST00000560054 PBRM1Q86U86 1689 aa17.1■□□□□ 0.33
AC104041.1-201ENST00000560054 CYB5RLQ6IPT4 315 aa17.07■□□□□ 0.32
AC104041.1-201ENST00000560054 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
AC104041.1-201ENST00000560054 ARAP1Q96P48 1450 aa17.02■□□□□ 0.32
AC104041.1-201ENST00000560054 GRIN2AQ12879 1464 aa16.99■□□□□ 0.31
AC104041.1-201ENST00000560054 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
AC104041.1-201ENST00000560054 FHAD1B1AJZ9 1412 aa16.98■□□□□ 0.31
AC104041.1-201ENST00000560054 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
AC104041.1-201ENST00000560054 NUP160Q12769 1436 aa16.94■□□□□ 0.3
AC104041.1-201ENST00000560054 CEP170Q5SW79 1584 aa16.9■□□□□ 0.3
AC104041.1-201ENST00000560054 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
AC104041.1-201ENST00000560054 IGF1RP08069 1367 aa16.86■□□□□ 0.29
AC104041.1-201ENST00000560054 ERCC6L2Q5T890 1561 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 209 ms