RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 MAPKBP1O60336 1514 aa17.92■□□□□ 0.46
SMAD3-211ENST00000559460 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
SMAD3-211ENST00000559460 JPH4Q96JJ6 628 aa17.85■□□□□ 0.45
SMAD3-211ENST00000559460 TSPOAP1O95153 1857 aa17.84■□□□□ 0.45
SMAD3-211ENST00000559460 ADGRL1O94910 1474 aa17.83■□□□□ 0.45
SMAD3-211ENST00000559460 WRNQ14191 1432 aaPredicted RBP eCLIP17.83■□□□□ 0.45
SMAD3-211ENST00000559460 HECW2Q9P2P5 1572 aa17.81■□□□□ 0.44
SMAD3-211ENST00000559460 ADCY10Q96PN6 1610 aa17.78■□□□□ 0.44
SMAD3-211ENST00000559460 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.44
SMAD3-211ENST00000559460 FBXO41Q8TF61 875 aa17.73■□□□□ 0.43
SMAD3-211ENST00000559460 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
SMAD3-211ENST00000559460 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
SMAD3-211ENST00000559460 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
SMAD3-211ENST00000559460 TTBK1Q5TCY1 1321 aaPredicted RBP17.61■□□□□ 0.41
SMAD3-211ENST00000559460 PLB1Q6P1J6 1458 aa17.6■□□□□ 0.41
SMAD3-211ENST00000559460 PTPRGP23470 1445 aa17.58■□□□□ 0.41
SMAD3-211ENST00000559460 ASXL2Q76L83 1435 aa17.58■□□□□ 0.41
SMAD3-211ENST00000559460 GLI2P10070 1586 aa17.57■□□□□ 0.4
SMAD3-211ENST00000559460 KIAA0586Q9BVV6 1533 aa17.57■□□□□ 0.4
SMAD3-211ENST00000559460 TEX14Q8IWB6 1497 aa17.56■□□□□ 0.4
SMAD3-211ENST00000559460 ABCC2Q92887 1545 aa17.56■□□□□ 0.4
SMAD3-211ENST00000559460 PPRC1Q5VV67 1664 aaKnown RBP17.55■□□□□ 0.4
SMAD3-211ENST00000559460 LMTK3Q96Q04 1460 aa17.5■□□□□ 0.39
SMAD3-211ENST00000559460 CARMIL2Q6F5E8 1435 aa17.5■□□□□ 0.39
SMAD3-211ENST00000559460 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
SMAD3-211ENST00000559460 TNIKQ9UKE5 1360 aa17.48■□□□□ 0.39
SMAD3-211ENST00000559460 CUL7Q14999 1698 aa17.47■□□□□ 0.39
SMAD3-211ENST00000559460 MAP3K4Q9Y6R4 1608 aa17.45■□□□□ 0.38
SMAD3-211ENST00000559460 EPRSP07814 1512 aaKnown RBP17.45■□□□□ 0.38
SMAD3-211ENST00000559460 UHRF1BP1LA0JNW5 1464 aa17.42■□□□□ 0.38
SMAD3-211ENST00000559460 UACAQ9BZF9 1416 aa17.41■□□□□ 0.38
SMAD3-211ENST00000559460 KDM5BQ9UGL1 1544 aa17.34■□□□□ 0.37
SMAD3-211ENST00000559460 KIF27Q86VH2 1401 aa17.33■□□□□ 0.36
SMAD3-211ENST00000559460 IGF1RP08069 1367 aa17.32■□□□□ 0.36
SMAD3-211ENST00000559460 KIF21BO75037 1637 aa17.32■□□□□ 0.36
SMAD3-211ENST00000559460 ZCCHC11Q5TAX3 1644 aaKnown RBP17.32■□□□□ 0.36
SMAD3-211ENST00000559460 IQGAP2Q13576 1575 aa17.32■□□□□ 0.36
SMAD3-211ENST00000559460 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
SMAD3-211ENST00000559460 SOCS7O14512 581 aa17.3■□□□□ 0.36
SMAD3-211ENST00000559460 WDR7Q9Y4E6 1490 aa17.3■□□□□ 0.36
SMAD3-211ENST00000559460 CD109Q6YHK3 1445 aa17.29■□□□□ 0.36
SMAD3-211ENST00000559460 DISP3Q9P2K9 1392 aa17.28■□□□□ 0.36
SMAD3-211ENST00000559460 PTPRMP28827 1452 aa17.28■□□□□ 0.36
SMAD3-211ENST00000559460 MAGI3Q5TCQ9 1506 aa17.26■□□□□ 0.35
SMAD3-211ENST00000559460 CARMIL1Q5VZK9 1371 aa17.26■□□□□ 0.35
SMAD3-211ENST00000559460 PCF11O94913 1555 aaKnown RBP17.24■□□□□ 0.35
SMAD3-211ENST00000559460 CFAP43Q8NDM7 1665 aa17.24■□□□□ 0.35
SMAD3-211ENST00000559460 DISP1Q96F81 1524 aa17.22■□□□□ 0.35
SMAD3-211ENST00000559460 KCNH8Q96L42 1107 aa17.22■□□□□ 0.35
SMAD3-211ENST00000559460 ILDR2Q71H61 639 aa17.19■□□□□ 0.34
SMAD3-211ENST00000559460 ARID4BQ4LE39 1312 aaPredicted RBP17.19■□□□□ 0.34
SMAD3-211ENST00000559460 CERKQ8TCT0 537 aa17.18■□□□□ 0.34
SMAD3-211ENST00000559460 ADAMTSL3P82987 1691 aa17.17■□□□□ 0.34
SMAD3-211ENST00000559460 KIAA0556O60303 1618 aa17.14■□□□□ 0.33
SMAD3-211ENST00000559460 ARAP3Q8WWN8 1544 aa17.14■□□□□ 0.33
SMAD3-211ENST00000559460 UGGT2Q9NYU1 1516 aa17.13■□□□□ 0.33
SMAD3-211ENST00000559460 MADDQ8WXG6 1647 aa17.1■□□□□ 0.33
SMAD3-211ENST00000559460 BCORL1Q5H9F3 1711 aa17.1■□□□□ 0.33
SMAD3-211ENST00000559460 HSPA2P54652 639 aa17.09■□□□□ 0.33
SMAD3-211ENST00000559460 PHLDB1Q86UU1 1377 aa17.09■□□□□ 0.33
SMAD3-211ENST00000559460 PLPPR3Q6T4P5 718 aa17.08■□□□□ 0.32
SMAD3-211ENST00000559460 FAM9AQ8IZU1 332 aaPredicted RBP17.07■□□□□ 0.32
SMAD3-211ENST00000559460 SPATA31D1Q6ZQQ2 1576 aa17.06■□□□□ 0.32
SMAD3-211ENST00000559460 RIMS1Q86UR5 1692 aaKnown RBP17.04■□□□□ 0.32
SMAD3-211ENST00000559460 RAPGEF3O95398 923 aa17.04■□□□□ 0.32
SMAD3-211ENST00000559460 RAPGEF2Q9Y4G8 1499 aa17.03■□□□□ 0.32
SMAD3-211ENST00000559460 GOLGA3Q08378 1498 aa17.02■□□□□ 0.32
SMAD3-211ENST00000559460 ABCA8O94911 1581 aa17■□□□□ 0.31
SMAD3-211ENST00000559460 POGZQ7Z3K3 1410 aa16.99■□□□□ 0.31
SMAD3-211ENST00000559460 NEO1Q92859 1461 aa16.98■□□□□ 0.31
SMAD3-211ENST00000559460 ARID3CA6NKF2 412 aa16.96■□□□□ 0.31
SMAD3-211ENST00000559460 FANCAO15360 1455 aa16.94■□□□□ 0.3
SMAD3-211ENST00000559460 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
SMAD3-211ENST00000559460 ABCA9Q8IUA7 1624 aa16.94■□□□□ 0.3
SMAD3-211ENST00000559460 ARHGEF40Q8TER5 1519 aa16.94■□□□□ 0.3
SMAD3-211ENST00000559460 FRMPD1Q5SYB0 1578 aa16.91■□□□□ 0.3
SMAD3-211ENST00000559460 CTTNBP2Q8WZ74 1663 aa16.9■□□□□ 0.3
SMAD3-211ENST00000559460 AKNAQ7Z591 1439 aa16.89■□□□□ 0.29
SMAD3-211ENST00000559460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
SMAD3-211ENST00000559460 HNRNPUL2Q1KMD3 747 aaKnown RBP16.89■□□□□ 0.29
SMAD3-211ENST00000559460 DENND4BO75064 1496 aaPredicted RBP16.88■□□□□ 0.29
SMAD3-211ENST00000559460 MLECQ14165 292 aa16.88■□□□□ 0.29
SMAD3-211ENST00000559460 YEATS2Q9ULM3 1422 aa16.87■□□□□ 0.29
SMAD3-211ENST00000559460 ATP10BO94823 1461 aa16.86■□□□□ 0.29
SMAD3-211ENST00000559460 EFCAB5A4FU69 1503 aa16.83■□□□□ 0.28
SMAD3-211ENST00000559460 FER1L4A9Z1Z3 1794 aa16.83■□□□□ 0.28
SMAD3-211ENST00000559460 PREX1Q8TCU6 1659 aa16.83■□□□□ 0.28
SMAD3-211ENST00000559460 TTC37Q6PGP7 1564 aa16.82■□□□□ 0.28
SMAD3-211ENST00000559460 ZFYVE16Q7Z3T8 1539 aa16.81■□□□□ 0.28
SMAD3-211ENST00000559460 CFAP74Q9C0B2 1584 aa16.81■□□□□ 0.28
SMAD3-211ENST00000559460 FHOD3Q2V2M9 1422 aa16.79■□□□□ 0.28
SMAD3-211ENST00000559460 RICTORQ6R327 1708 aa16.79■□□□□ 0.28
SMAD3-211ENST00000559460 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
SMAD3-211ENST00000559460 P3H3Q8IVL6 736 aa16.78■□□□□ 0.28
SMAD3-211ENST00000559460 MAGI2Q86UL8 1455 aa16.76■□□□□ 0.27
SMAD3-211ENST00000559460 ZMYM4Q5VZL5 1548 aa16.75■□□□□ 0.27
SMAD3-211ENST00000559460 IQSEC2Q5JU85 1478 aa16.74■□□□□ 0.27
SMAD3-211ENST00000559460 PTPRTO14522 1441 aa16.73■□□□□ 0.27
SMAD3-211ENST00000559460 RAPGEF6Q8TEU7 1601 aa16.73■□□□□ 0.27
SMAD3-211ENST00000559460 STRCQ7RTU9 1775 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms