RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 NUP160Q12769 1436 aa25.99■■□□□ 1.75
PBX1-215ENST00000559240 CHD1O14646 1710 aa25.97■■□□□ 1.75
PBX1-215ENST00000559240 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
PBX1-215ENST00000559240 KIAA0586Q9BVV6 1533 aa25.94■■□□□ 1.74
PBX1-215ENST00000559240 IQGAP2Q13576 1575 aa25.92■■□□□ 1.74
PBX1-215ENST00000559240 EFCAB5A4FU69 1503 aa25.92■■□□□ 1.74
PBX1-215ENST00000559240 CLIP1P30622 1438 aa25.89■■□□□ 1.74
PBX1-215ENST00000559240 CHMP7Q8WUX9 453 aaPredicted RBP25.89■■□□□ 1.73
PBX1-215ENST00000559240 SAMD9Q5K651 1589 aa25.87■■□□□ 1.73
PBX1-215ENST00000559240 PPARGC1BQ86YN6 1023 aaKnown RBP25.87■■□□□ 1.73
PBX1-215ENST00000559240 UGGT2Q9NYU1 1516 aa25.87■■□□□ 1.73
PBX1-215ENST00000559240 EHMT2Q96KQ7 1210 aa25.86■■□□□ 1.73
PBX1-215ENST00000559240 ARHGAP35Q9NRY4 1499 aa25.82■■□□□ 1.72
PBX1-215ENST00000559240 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
PBX1-215ENST00000559240 SHROOM2Q13796 1616 aa25.77■■□□□ 1.72
PBX1-215ENST00000559240 ARAP1Q96P48 1450 aa25.76■■□□□ 1.71
PBX1-215ENST00000559240 VPS8Q8N3P4 1428 aa25.69■■□□□ 1.7
PBX1-215ENST00000559240 KIAA0556O60303 1618 aa25.68■■□□□ 1.7
PBX1-215ENST00000559240 FBLN2P98095 1184 aa25.68■■□□□ 1.7
PBX1-215ENST00000559240 SCAF1Q9H7N4 1312 aaKnown RBP25.68■■□□□ 1.7
PBX1-215ENST00000559240 DISP1Q96F81 1524 aa25.67■■□□□ 1.7
PBX1-215ENST00000559240 FMN1Q68DA7 1419 aa25.57■■□□□ 1.68
PBX1-215ENST00000559240 CARMIL2Q6F5E8 1435 aa25.57■■□□□ 1.68
PBX1-215ENST00000559240 JPH4Q96JJ6 628 aa25.56■■□□□ 1.68
PBX1-215ENST00000559240 FHOD3Q2V2M9 1422 aa25.54■■□□□ 1.68
PBX1-215ENST00000559240 FYCO1Q9BQS8 1478 aa25.51■■□□□ 1.67
PBX1-215ENST00000559240 MAP3K1Q13233 1512 aa25.51■■□□□ 1.67
PBX1-215ENST00000559240 CASKIN1Q8WXD9 1431 aa25.49■■□□□ 1.67
PBX1-215ENST00000559240 PRG4Q92954 1404 aaPredicted RBP25.47■■□□□ 1.67
PBX1-215ENST00000559240 PCF11O94913 1555 aaKnown RBP25.47■■□□□ 1.67
PBX1-215ENST00000559240 OSCARQ8IYS5 282 aa25.46■■□□□ 1.67
PBX1-215ENST00000559240 RANGAP1P46060 587 aaPredicted RBP25.45■■□□□ 1.66
PBX1-215ENST00000559240 CFAP43Q8NDM7 1665 aa25.41■■□□□ 1.66
PBX1-215ENST00000559240 HECW1Q76N89 1606 aa25.4■■□□□ 1.66
PBX1-215ENST00000559240 RAPGEF6Q8TEU7 1601 aa25.37■■□□□ 1.65
PBX1-215ENST00000559240 ABCA8O94911 1581 aa25.37■■□□□ 1.65
PBX1-215ENST00000559240 P3H3Q8IVL6 736 aa25.35■■□□□ 1.65
PBX1-215ENST00000559240 ERCC6L2Q5T890 1561 aa25.35■■□□□ 1.65
PBX1-215ENST00000559240 TIAM1Q13009 1591 aa25.34■■□□□ 1.65
PBX1-215ENST00000559240 LRRIQ1Q96JM4 1722 aa25.33■■□□□ 1.65
PBX1-215ENST00000559240 CCDC18Q5T9S5 1454 aa25.32■■□□□ 1.64
PBX1-215ENST00000559240 PTPRGP23470 1445 aa25.28■■□□□ 1.64
PBX1-215ENST00000559240 UHRF1BP1LA0JNW5 1464 aa25.25■■□□□ 1.63
PBX1-215ENST00000559240 NUP153P49790 1475 aaKnown RBP25.25■■□□□ 1.63
PBX1-215ENST00000559240 EPRSP07814 1512 aaKnown RBP25.23■■□□□ 1.63
PBX1-215ENST00000559240 PLB1Q6P1J6 1458 aa25.21■■□□□ 1.63
PBX1-215ENST00000559240 ABCC2Q92887 1545 aa25.2■■□□□ 1.62
PBX1-215ENST00000559240 UACAQ9BZF9 1416 aa25.2■■□□□ 1.62
PBX1-215ENST00000559240 APLP2Q06481 763 aa25.19■■□□□ 1.62
PBX1-215ENST00000559240 LRRC9Q6ZRR7 1453 aa25.18■■□□□ 1.62
PBX1-215ENST00000559240 ARHGEF11O15085 1522 aa25.15■■□□□ 1.62
PBX1-215ENST00000559240 EHBP1L1Q8N3D4 1523 aa25.14■■□□□ 1.61
PBX1-215ENST00000559240 PCGF6Q9BYE7 350 aa25.13■■□□□ 1.61
PBX1-215ENST00000559240 TTBK1Q5TCY1 1321 aaPredicted RBP25.13■■□□□ 1.61
PBX1-215ENST00000559240 PRKCSHP14314 528 aaPredicted RBP25.11■■□□□ 1.61
PBX1-215ENST00000559240 CDK13Q14004 1512 aaKnown RBP25.09■■□□□ 1.61
PBX1-215ENST00000559240 KDM5BQ9UGL1 1544 aa25.08■■□□□ 1.61
PBX1-215ENST00000559240 RIMBP3CA6NJZ7 1639 aa25.07■■□□□ 1.6
PBX1-215ENST00000559240 RIMBP3BA6NNM3 1639 aa25.07■■□□□ 1.6
PBX1-215ENST00000559240 RIMBP3Q9UFD9 1639 aa25.07■■□□□ 1.6
PBX1-215ENST00000559240 ATP10BO94823 1461 aa25.07■■□□□ 1.6
PBX1-215ENST00000559240 ADCY10Q96PN6 1610 aa25.07■■□□□ 1.6
PBX1-215ENST00000559240 MAGI3Q5TCQ9 1506 aa25.06■■□□□ 1.6
PBX1-215ENST00000559240 KANK4Q5T7N3 995 aaPredicted RBP25.03■■□□□ 1.6
PBX1-215ENST00000559240 SUPT6HQ7KZ85 1726 aaKnown RBP25.03■■□□□ 1.6
PBX1-215ENST00000559240 ZCCHC11Q5TAX3 1644 aaKnown RBP25.01■■□□□ 1.59
PBX1-215ENST00000559240 TROQ12816 1431 aaPredicted RBP24.98■■□□□ 1.59
PBX1-215ENST00000559240 MTUS2Q5JR59 1369 aa24.97■■□□□ 1.59
PBX1-215ENST00000559240 ATP1B4Q9UN42 357 aaPredicted RBP24.97■■□□□ 1.59
PBX1-215ENST00000559240 CDK11AQ9UQ88 783 aaPredicted RBP24.97■■□□□ 1.59
PBX1-215ENST00000559240 BCL11AQ9H165 835 aa24.94■■□□□ 1.58
PBX1-215ENST00000559240 TRIM26Q12899 539 aaPredicted RBP24.92■■□□□ 1.58
PBX1-215ENST00000559240 NCOA2Q15596 1464 aa24.91■■□□□ 1.58
PBX1-215ENST00000559240 RRBP1Q9P2E9 1410 aaKnown RBP24.91■■□□□ 1.58
PBX1-215ENST00000559240 KIF14Q15058 1648 aa24.89■■□□□ 1.57
PBX1-215ENST00000559240 PHLDB1Q86UU1 1377 aa24.83■■□□□ 1.57
PBX1-215ENST00000559240 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.83■■□□□ 1.57
PBX1-215ENST00000559240 PLEKHD1A6NEE1 506 aa24.83■■□□□ 1.57
PBX1-215ENST00000559240 ABCC10Q5T3U5 1492 aa24.83■■□□□ 1.57
PBX1-215ENST00000559240 ITSN2Q9NZM3 1697 aa24.83■■□□□ 1.57
PBX1-215ENST00000559240 MYOM3Q5VTT5 1437 aa24.82■■□□□ 1.56
PBX1-215ENST00000559240 MAPKBP1O60336 1514 aa24.8■■□□□ 1.56
PBX1-215ENST00000559240 MIA2Q96PC5 1412 aa24.8■■□□□ 1.56
PBX1-215ENST00000559240 WDR7Q9Y4E6 1490 aa24.79■■□□□ 1.56
PBX1-215ENST00000559240 TCOF1Q13428 1488 aaKnown RBP24.76■■□□□ 1.55
PBX1-215ENST00000559240 FGD6Q6ZV73 1430 aa24.76■■□□□ 1.55
PBX1-215ENST00000559240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.75■■□□□ 1.55
PBX1-215ENST00000559240 HNRNPUL2Q1KMD3 747 aaKnown RBP24.75■■□□□ 1.55
PBX1-215ENST00000559240 CDC42BPAQ5VT25 1732 aa24.74■■□□□ 1.55
PBX1-215ENST00000559240 CCNB3Q8WWL7 1395 aa24.74■■□□□ 1.55
PBX1-215ENST00000559240 ARID3CA6NKF2 412 aa24.74■■□□□ 1.55
PBX1-215ENST00000559240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.73■■□□□ 1.55
PBX1-215ENST00000559240 ARAP3Q8WWN8 1544 aa24.72■■□□□ 1.55
PBX1-215ENST00000559240 PREX2Q70Z35 1606 aa24.72■■□□□ 1.55
PBX1-215ENST00000559240 ASXL2Q76L83 1435 aa24.72■■□□□ 1.55
PBX1-215ENST00000559240 ABCA9Q8IUA7 1624 aa24.71■■□□□ 1.55
PBX1-215ENST00000559240 GPATCH8Q9UKJ3 1502 aaKnown RBP24.71■■□□□ 1.55
PBX1-215ENST00000559240 PTPN23Q9H3S7 1636 aa24.7■■□□□ 1.54
PBX1-215ENST00000559240 TTC37Q6PGP7 1564 aa24.69■■□□□ 1.54
PBX1-215ENST00000559240 MYO5CQ9NQX4 1742 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms