RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 IGF1RP08069 1367 aa9.81□□□□□ -0.84
SMAD3-209ENST00000558894 KIF13AQ9H1H9 1805 aa9.79□□□□□ -0.84
SMAD3-209ENST00000558894 PRG4Q92954 1404 aaPredicted RBP9.78□□□□□ -0.84
SMAD3-209ENST00000558894 KIF27Q86VH2 1401 aa9.77□□□□□ -0.85
SMAD3-209ENST00000558894 TRHP20396 242 aaPredicted RBP9.77□□□□□ -0.85
SMAD3-209ENST00000558894 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
SMAD3-209ENST00000558894 KIAA0586Q9BVV6 1533 aa9.75□□□□□ -0.85
SMAD3-209ENST00000558894 ADCY10Q96PN6 1610 aa9.74□□□□□ -0.85
SMAD3-209ENST00000558894 CARMIL1Q5VZK9 1371 aa9.7□□□□□ -0.86
SMAD3-209ENST00000558894 MAPKBP1O60336 1514 aa9.69□□□□□ -0.86
SMAD3-209ENST00000558894 IQGAP2Q13576 1575 aa9.68□□□□□ -0.86
SMAD3-209ENST00000558894 DIP2BQ9P265 1576 aa9.67□□□□□ -0.86
SMAD3-209ENST00000558894 DISP1Q96F81 1524 aa9.66□□□□□ -0.86
SMAD3-209ENST00000558894 CTTNBP2Q8WZ74 1663 aa9.66□□□□□ -0.86
SMAD3-209ENST00000558894 ABCC10Q5T3U5 1492 aa9.65□□□□□ -0.87
SMAD3-209ENST00000558894 UGGT2Q9NYU1 1516 aa9.64□□□□□ -0.87
SMAD3-209ENST00000558894 RAPGEF2Q9Y4G8 1499 aa9.64□□□□□ -0.87
SMAD3-209ENST00000558894 KIAA0556O60303 1618 aa9.62□□□□□ -0.87
SMAD3-209ENST00000558894 PPRC1Q5VV67 1664 aaKnown RBP9.61□□□□□ -0.87
SMAD3-209ENST00000558894 UHRF1BP1LA0JNW5 1464 aa9.6□□□□□ -0.87
SMAD3-209ENST00000558894 PRXQ9BXM0 1461 aa9.6□□□□□ -0.87
SMAD3-209ENST00000558894 TSPOAP1O95153 1857 aa9.6□□□□□ -0.87
SMAD3-209ENST00000558894 PTPRGP23470 1445 aa9.6□□□□□ -0.87
SMAD3-209ENST00000558894 ABCC2Q92887 1545 aa9.6□□□□□ -0.87
SMAD3-209ENST00000558894 TNIKQ9UKE5 1360 aa9.6□□□□□ -0.87
SMAD3-209ENST00000558894 CARMIL2Q6F5E8 1435 aa9.59□□□□□ -0.87
SMAD3-209ENST00000558894 ZCCHC11Q5TAX3 1644 aaKnown RBP9.57□□□□□ -0.88
SMAD3-209ENST00000558894 GLI2P10070 1586 aa9.57□□□□□ -0.88
SMAD3-209ENST00000558894 KDM5BQ9UGL1 1544 aa9.56□□□□□ -0.88
SMAD3-209ENST00000558894 FAM69CQ0P6D2 419 aa9.56□□□□□ -0.88
SMAD3-209ENST00000558894 UACAQ9BZF9 1416 aa9.56□□□□□ -0.88
SMAD3-209ENST00000558894 NPM1P06748 294 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMAD3-209ENST00000558894 MAP3K4Q9Y6R4 1608 aa9.55□□□□□ -0.88
SMAD3-209ENST00000558894 ASXL2Q76L83 1435 aa9.54□□□□□ -0.88
SMAD3-209ENST00000558894 ABCA8O94911 1581 aa9.54□□□□□ -0.88
SMAD3-209ENST00000558894 KDM6BO15054 1643 aa9.53□□□□□ -0.88
SMAD3-209ENST00000558894 SAMD9Q5K651 1589 aa9.52□□□□□ -0.89
SMAD3-209ENST00000558894 PLB1Q6P1J6 1458 aa9.52□□□□□ -0.89
SMAD3-209ENST00000558894 TTBK1Q5TCY1 1321 aaPredicted RBP9.52□□□□□ -0.89
SMAD3-209ENST00000558894 EPRSP07814 1512 aaKnown RBP9.51□□□□□ -0.89
SMAD3-209ENST00000558894 GOLGA3Q08378 1498 aa9.49□□□□□ -0.89
SMAD3-209ENST00000558894 COL17A1Q9UMD9 1497 aaPredicted RBP9.47□□□□□ -0.89
SMAD3-209ENST00000558894 CFAP43Q8NDM7 1665 aa9.46□□□□□ -0.89
SMAD3-209ENST00000558894 SOCS7O14512 581 aa9.46□□□□□ -0.9
SMAD3-209ENST00000558894 CSRNP3Q8WYN3 585 aa9.46□□□□□ -0.9
SMAD3-209ENST00000558894 WDR7Q9Y4E6 1490 aa9.46□□□□□ -0.9
SMAD3-209ENST00000558894 KIF21BO75037 1637 aa9.45□□□□□ -0.9
SMAD3-209ENST00000558894 EEA1Q15075 1411 aa9.44□□□□□ -0.9
SMAD3-209ENST00000558894 ILDR2Q71H61 639 aa9.43□□□□□ -0.9
SMAD3-209ENST00000558894 RAPGEF6Q8TEU7 1601 aa9.42□□□□□ -0.9
SMAD3-209ENST00000558894 ATP10BO94823 1461 aa9.42□□□□□ -0.9
SMAD3-209ENST00000558894 MAGI3Q5TCQ9 1506 aa9.41□□□□□ -0.9
SMAD3-209ENST00000558894 KDM4FA0A1W2PPD8 638 aa9.41□□□□□ -0.9
SMAD3-209ENST00000558894 LMTK3Q96Q04 1460 aa9.4□□□□□ -0.9
SMAD3-209ENST00000558894 ABCA9Q8IUA7 1624 aa9.4□□□□□ -0.9
SMAD3-209ENST00000558894 TEX14Q8IWB6 1497 aa9.4□□□□□ -0.91
SMAD3-209ENST00000558894 P3H3Q8IVL6 736 aa9.39□□□□□ -0.91
SMAD3-209ENST00000558894 NUP153P49790 1475 aaKnown RBP9.39□□□□□ -0.91
SMAD3-209ENST00000558894 FBXO41Q8TF61 875 aa9.37□□□□□ -0.91
SMAD3-209ENST00000558894 CD109Q6YHK3 1445 aa9.37□□□□□ -0.91
SMAD3-209ENST00000558894 EFCAB5A4FU69 1503 aa9.36□□□□□ -0.91
SMAD3-209ENST00000558894 FHOD3Q2V2M9 1422 aa9.36□□□□□ -0.91
SMAD3-209ENST00000558894 FAM9AQ8IZU1 332 aaPredicted RBP9.35□□□□□ -0.91
SMAD3-209ENST00000558894 LRRIQ1Q96JM4 1722 aa9.35□□□□□ -0.91
SMAD3-209ENST00000558894 KCNH8Q96L42 1107 aa9.35□□□□□ -0.91
SMAD3-209ENST00000558894 ARAP3Q8WWN8 1544 aa9.35□□□□□ -0.91
SMAD3-209ENST00000558894 ADGRL1O94910 1474 aa9.34□□□□□ -0.91
SMAD3-209ENST00000558894 ARID3CA6NKF2 412 aa9.33□□□□□ -0.92
SMAD3-209ENST00000558894 FRMPD1Q5SYB0 1578 aa9.33□□□□□ -0.92
SMAD3-209ENST00000558894 ARHGAP35Q9NRY4 1499 aa9.31□□□□□ -0.92
SMAD3-209ENST00000558894 RICTORQ6R327 1708 aa9.31□□□□□ -0.92
SMAD3-209ENST00000558894 TTC37Q6PGP7 1564 aa9.3□□□□□ -0.92
SMAD3-209ENST00000558894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMAD3-209ENST00000558894 RANGAP1P46060 587 aaPredicted RBP9.29□□□□□ -0.92
SMAD3-209ENST00000558894 CDK13Q14004 1512 aaKnown RBP9.29□□□□□ -0.92
SMAD3-209ENST00000558894 NEO1Q92859 1461 aa9.28□□□□□ -0.92
SMAD3-209ENST00000558894 SIGLEC1Q9BZZ2 1709 aa9.28□□□□□ -0.92
SMAD3-209ENST00000558894 ADAMTSL3P82987 1691 aa9.26□□□□□ -0.93
SMAD3-209ENST00000558894 PHLDB1Q86UU1 1377 aa9.26□□□□□ -0.93
SMAD3-209ENST00000558894 HECW1Q76N89 1606 aa9.26□□□□□ -0.93
SMAD3-209ENST00000558894 KIF14Q15058 1648 aa9.25□□□□□ -0.93
SMAD3-209ENST00000558894 CFAP74Q9C0B2 1584 aa9.24□□□□□ -0.93
SMAD3-209ENST00000558894 BCORL1Q5H9F3 1711 aa9.24□□□□□ -0.93
SMAD3-209ENST00000558894 MYO5CQ9NQX4 1742 aa9.24□□□□□ -0.93
SMAD3-209ENST00000558894 FMN1Q68DA7 1419 aa9.23□□□□□ -0.93
SMAD3-209ENST00000558894 RAPGEF3O95398 923 aa9.23□□□□□ -0.93
SMAD3-209ENST00000558894 CDC42BPBQ9Y5S2 1711 aa9.22□□□□□ -0.93
SMAD3-209ENST00000558894 FANCAO15360 1455 aa9.22□□□□□ -0.93
SMAD3-209ENST00000558894 ZMYM4Q5VZL5 1548 aa9.22□□□□□ -0.93
SMAD3-209ENST00000558894 HECW2Q9P2P5 1572 aa9.22□□□□□ -0.93
SMAD3-209ENST00000558894 PLEKHD1A6NEE1 506 aa9.22□□□□□ -0.93
SMAD3-209ENST00000558894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.22□□□□□ -0.93
SMAD3-209ENST00000558894 UBTFP17480 764 aaKnown RBP9.22□□□□□ -0.93
SMAD3-209ENST00000558894 HNRNPUL2Q1KMD3 747 aaKnown RBP9.22□□□□□ -0.93
SMAD3-209ENST00000558894 EHMT2Q96KQ7 1210 aa9.22□□□□□ -0.93
SMAD3-209ENST00000558894 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
SMAD3-209ENST00000558894 ARHGEF40Q8TER5 1519 aa9.21□□□□□ -0.93
SMAD3-209ENST00000558894 PCF11O94913 1555 aaKnown RBP9.21□□□□□ -0.93
SMAD3-209ENST00000558894 PLCH2O75038 1416 aa9.21□□□□□ -0.94
SMAD3-209ENST00000558894 MADDQ8WXG6 1647 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms