RNA–Protein interactions for RNA: ENST00000558816.5

SEMA6D-210, Transcript of semaphorin 6D, humanhuman

TSL 5 BASIC

Gene SEMA6D, Length 4,419 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-210ENST00000558816 VPS8Q8N3P4 1428 aa8.29□□□□□ -1.08
SEMA6D-210ENST00000558816 ZEB1P37275 1124 aaPredicted RBP8.28□□□□□ -1.08
SEMA6D-210ENST00000558816 THOC2Q8NI27 1593 aaKnown RBP8.28□□□□□ -1.08
SEMA6D-210ENST00000558816 AQRO60306 1485 aaKnown RBP eCLIP8.26□□□□□ -1.09
SEMA6D-210ENST00000558816 CHMP7Q8WUX9 453 aaPredicted RBP8.26□□□□□ -1.09
SEMA6D-210ENST00000558816 WDR62O43379 1518 aa8.26□□□□□ -1.09
SEMA6D-210ENST00000558816 NESP48681 1621 aa8.26□□□□□ -1.09
SEMA6D-210ENST00000558816 TOPBP1Q92547 1522 aa8.25□□□□□ -1.09
SEMA6D-210ENST00000558816 NPM1P06748 294 aaKnown RBP eCLIP8.24□□□□□ -1.09
SEMA6D-210ENST00000558816 CLIP1P30622 1438 aa8.24□□□□□ -1.09
SEMA6D-210ENST00000558816 AMER1Q5JTC6 1135 aaPredicted RBP8.24□□□□□ -1.09
SEMA6D-210ENST00000558816 TIAM1Q13009 1591 aa8.23□□□□□ -1.09
SEMA6D-210ENST00000558816 RAPGEF2Q9Y4G8 1499 aa8.23□□□□□ -1.09
SEMA6D-210ENST00000558816 SLC4A1APQ9BWU0 796 aaKnown RBP8.23□□□□□ -1.09
SEMA6D-210ENST00000558816 KDM5BQ9UGL1 1544 aa8.22□□□□□ -1.09
SEMA6D-210ENST00000558816 GCC2Q8IWJ2 1684 aa8.21□□□□□ -1.09
SEMA6D-210ENST00000558816 EFCAB5A4FU69 1503 aa8.21□□□□□ -1.1
SEMA6D-210ENST00000558816 GRIN2BQ13224 1484 aa8.21□□□□□ -1.1
SEMA6D-210ENST00000558816 TARBP1Q13395 1621 aaKnown RBP8.21□□□□□ -1.1
SEMA6D-210ENST00000558816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.2□□□□□ -1.1
SEMA6D-210ENST00000558816 FGD5Q6ZNL6 1462 aa8.2□□□□□ -1.1
SEMA6D-210ENST00000558816 MAPKBP1O60336 1514 aa8.19□□□□□ -1.1
SEMA6D-210ENST00000558816 PELP1Q8IZL8 1130 aaKnown RBP8.19□□□□□ -1.1
SEMA6D-210ENST00000558816 ABCA10Q8WWZ4 1543 aa8.19□□□□□ -1.1
SEMA6D-210ENST00000558816 ARHGAP35Q9NRY4 1499 aa8.18□□□□□ -1.1
SEMA6D-210ENST00000558816 OSCARQ8IYS5 282 aa8.18□□□□□ -1.1
SEMA6D-210ENST00000558816 MAGI1Q96QZ7 1491 aaPredicted RBP8.17□□□□□ -1.1
SEMA6D-210ENST00000558816 GAPVD1Q14C86 1478 aa8.17□□□□□ -1.1
SEMA6D-210ENST00000558816 CLSPNQ9HAW4 1339 aa8.16□□□□□ -1.1
SEMA6D-210ENST00000558816 CDK11AQ9UQ88 783 aaPredicted RBP8.16□□□□□ -1.1
SEMA6D-210ENST00000558816 PBRM1Q86U86 1689 aa8.16□□□□□ -1.1
SEMA6D-210ENST00000558816 SNAPC4Q5SXM2 1469 aa8.16□□□□□ -1.1
SEMA6D-210ENST00000558816 URB2Q14146 1524 aaKnown RBP8.15□□□□□ -1.1
SEMA6D-210ENST00000558816 CCER1Q8TC90 406 aaPredicted RBP8.15□□□□□ -1.1
SEMA6D-210ENST00000558816 POLA1P09884 1462 aaPredicted RBP8.15□□□□□ -1.1
SEMA6D-210ENST00000558816 FHAD1B1AJZ9 1412 aa8.15□□□□□ -1.11
SEMA6D-210ENST00000558816 CARMIL2Q6F5E8 1435 aa8.15□□□□□ -1.11
SEMA6D-210ENST00000558816 ADCY10Q96PN6 1610 aa8.14□□□□□ -1.11
SEMA6D-210ENST00000558816 ESF1Q9H501 851 aaKnown RBP8.13□□□□□ -1.11
SEMA6D-210ENST00000558816 PCF11O94913 1555 aaKnown RBP8.12□□□□□ -1.11
SEMA6D-210ENST00000558816 HECW1Q76N89 1606 aa8.12□□□□□ -1.11
SEMA6D-210ENST00000558816 CROCC2H7BZ55 1655 aa8.11□□□□□ -1.11
SEMA6D-210ENST00000558816 CARMIL1Q5VZK9 1371 aa8.11□□□□□ -1.11
SEMA6D-210ENST00000558816 ITGAEP38570 1179 aa8.11□□□□□ -1.11
SEMA6D-210ENST00000558816 NCBP3Q53F19 620 aaKnown RBP8.1□□□□□ -1.11
SEMA6D-210ENST00000558816 TDRD9Q8NDG6 1382 aaKnown RBP8.1□□□□□ -1.11
SEMA6D-210ENST00000558816 SYNJ2O15056 1496 aa8.09□□□□□ -1.11
SEMA6D-210ENST00000558816 FYCO1Q9BQS8 1478 aa8.09□□□□□ -1.11
SEMA6D-210ENST00000558816 TCOF1Q13428 1488 aaKnown RBP8.08□□□□□ -1.12
SEMA6D-210ENST00000558816 RAD54L2Q9Y4B4 1467 aa8.06□□□□□ -1.12
SEMA6D-210ENST00000558816 AKNAQ7Z591 1439 aa8.05□□□□□ -1.12
SEMA6D-210ENST00000558816 DENND4BO75064 1496 aaPredicted RBP8.04□□□□□ -1.12
SEMA6D-210ENST00000558816 LRRC9Q6ZRR7 1453 aa8.04□□□□□ -1.12
SEMA6D-210ENST00000558816 DHX57Q6P158 1386 aaKnown RBP8.03□□□□□ -1.12
SEMA6D-210ENST00000558816 ADAMTS12P58397 1594 aa8.03□□□□□ -1.12
SEMA6D-210ENST00000558816 FAM50AQ14320 339 aaKnown RBP8.03□□□□□ -1.12
SEMA6D-210ENST00000558816 UGGT2Q9NYU1 1516 aa8.02□□□□□ -1.13
SEMA6D-210ENST00000558816 EIF4G3O43432 1585 aaKnown RBP8.02□□□□□ -1.13
SEMA6D-210ENST00000558816 IGF1RP08069 1367 aa8.02□□□□□ -1.13
SEMA6D-210ENST00000558816 ZBTB22O15209 634 aa8.01□□□□□ -1.13
SEMA6D-210ENST00000558816 ADGBQ8N7X0 1667 aa8□□□□□ -1.13
SEMA6D-210ENST00000558816 PTPN23Q9H3S7 1636 aa8□□□□□ -1.13
SEMA6D-210ENST00000558816 CASKIN1Q8WXD9 1431 aa8□□□□□ -1.13
SEMA6D-210ENST00000558816 E9PCH4 1651 aa8□□□□□ -1.13
SEMA6D-210ENST00000558816 TRIM52Q96A61 297 aa8□□□□□ -1.13
SEMA6D-210ENST00000558816 GRIN2AQ12879 1464 aa8□□□□□ -1.13
SEMA6D-210ENST00000558816 BCANQ96GW7 911 aa7.99□□□□□ -1.13
SEMA6D-210ENST00000558816 SCAF1Q9H7N4 1312 aaKnown RBP7.99□□□□□ -1.13
SEMA6D-210ENST00000558816 KIAA0586Q9BVV6 1533 aa7.99□□□□□ -1.13
SEMA6D-210ENST00000558816 CENPBP07199 599 aaPredicted RBP7.98□□□□□ -1.13
SEMA6D-210ENST00000558816 MAGI3Q5TCQ9 1506 aa7.98□□□□□ -1.13
SEMA6D-210ENST00000558816 SUPT6HQ7KZ85 1726 aaKnown RBP7.98□□□□□ -1.13
SEMA6D-210ENST00000558816 P3H3Q8IVL6 736 aa7.97□□□□□ -1.13
SEMA6D-210ENST00000558816 IQGAP2Q13576 1575 aa7.97□□□□□ -1.13
SEMA6D-210ENST00000558816 JPH4Q96JJ6 628 aa7.96□□□□□ -1.13
SEMA6D-210ENST00000558816 POLR3GLQ9BT43 218 aa7.96□□□□□ -1.13
SEMA6D-210ENST00000558816 DAXXQ9UER7 740 aaPredicted RBP7.96□□□□□ -1.13
SEMA6D-210ENST00000558816 FMN1Q68DA7 1419 aa7.96□□□□□ -1.14
SEMA6D-210ENST00000558816 EHBP1L1Q8N3D4 1523 aa7.95□□□□□ -1.14
SEMA6D-210ENST00000558816 ZNF608Q9ULD9 1512 aaPredicted RBP7.95□□□□□ -1.14
SEMA6D-210ENST00000558816 ZNF777Q9ULD5 760 aaPredicted RBP7.94□□□□□ -1.14
SEMA6D-210ENST00000558816 KDM5DQ9BY66 1539 aa7.94□□□□□ -1.14
SEMA6D-210ENST00000558816 DNMT1P26358 1616 aaKnown RBP7.94□□□□□ -1.14
SEMA6D-210ENST00000558816 STAG3Q9UJ98 1225 aa7.94□□□□□ -1.14
SEMA6D-210ENST00000558816 PTPRGP23470 1445 aa7.94□□□□□ -1.14
SEMA6D-210ENST00000558816 LAMC1P11047 1609 aa7.93□□□□□ -1.14
SEMA6D-210ENST00000558816 ARID3CA6NKF2 412 aa7.93□□□□□ -1.14
SEMA6D-210ENST00000558816 NCOA2Q15596 1464 aa7.92□□□□□ -1.14
SEMA6D-210ENST00000558816 MBD5Q9P267 1494 aa7.92□□□□□ -1.14
SEMA6D-210ENST00000558816 NUP160Q12769 1436 aa7.92□□□□□ -1.14
SEMA6D-210ENST00000558816 TIMELESSQ9UNS1 1208 aa7.92□□□□□ -1.14
SEMA6D-210ENST00000558816 CDC42BPAQ5VT25 1732 aa7.91□□□□□ -1.14
SEMA6D-210ENST00000558816 SHROOM2Q13796 1616 aa7.91□□□□□ -1.14
SEMA6D-210ENST00000558816 PLEKHD1A6NEE1 506 aa7.91□□□□□ -1.14
SEMA6D-210ENST00000558816 ACIN1Q9UKV3 1341 aaKnown RBP7.91□□□□□ -1.14
SEMA6D-210ENST00000558816 PRG4Q92954 1404 aaPredicted RBP7.91□□□□□ -1.14
SEMA6D-210ENST00000558816 TSPY4P0CV99 314 aa7.89□□□□□ -1.15
SEMA6D-210ENST00000558816 TSPY10P0CW01 314 aa7.89□□□□□ -1.15
SEMA6D-210ENST00000558816 KIAA0556O60303 1618 aa7.89□□□□□ -1.15
SEMA6D-210ENST00000558816 HFM1A2PYH4 1435 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms