RNA–Protein interactions for RNA: ENST00000558816.5

SEMA6D-210, Transcript of semaphorin 6D, humanhuman

TSL 5 BASIC

Gene SEMA6D, Length 4,419 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-210ENST00000558816 NISCHQ9Y2I1 1504 aa11.69□□□□□ -0.54
SEMA6D-210ENST00000558816 CCDC180Q9P1Z9 1646 aa10.43□□□□□ -0.74
SEMA6D-210ENST00000558816 DCAF8L2P0C7V8 631 aa10.1□□□□□ -0.79
SEMA6D-210ENST00000558816 DCAF1Q9Y4B6 1507 aa10.09□□□□□ -0.79
SEMA6D-210ENST00000558816 ZCCHC6Q5VYS8 1495 aaKnown RBP10.06□□□□□ -0.8
SEMA6D-210ENST00000558816 CHIC1Q5VXU3 224 aa9.92□□□□□ -0.82
SEMA6D-210ENST00000558816 MYO15BQ96JP2 1530 aa9.86□□□□□ -0.83
SEMA6D-210ENST00000558816 ABCC9O60706 1549 aa9.7□□□□□ -0.86
SEMA6D-210ENST00000558816 AEBP2Q6ZN18 517 aaPredicted RBP9.64□□□□□ -0.87
SEMA6D-210ENST00000558816 RB1CC1Q8TDY2 1594 aa9.58□□□□□ -0.88
SEMA6D-210ENST00000558816 NACADO15069 1562 aa9.58□□□□□ -0.88
SEMA6D-210ENST00000558816 EIF4G1Q04637 1599 aaKnown RBP9.5□□□□□ -0.89
SEMA6D-210ENST00000558816 SHROOM4Q9ULL8 1493 aa9.41□□□□□ -0.9
SEMA6D-210ENST00000558816 EHMT2Q96KQ7 1210 aa9.37□□□□□ -0.91
SEMA6D-210ENST00000558816 UNC13AQ9UPW8 1703 aa9.31□□□□□ -0.92
SEMA6D-210ENST00000558816 SLC24A1O60721 1099 aa9.21□□□□□ -0.93
SEMA6D-210ENST00000558816 SUPT5HO00267 1087 aaKnown RBP9.21□□□□□ -0.94
SEMA6D-210ENST00000558816 PEG3Q9GZU2 1588 aa9.2□□□□□ -0.94
SEMA6D-210ENST00000558816 BAZ1AQ9NRL2 1556 aaPredicted RBP9.18□□□□□ -0.94
SEMA6D-210ENST00000558816 FAM9AQ8IZU1 332 aaPredicted RBP9.16□□□□□ -0.94
SEMA6D-210ENST00000558816 SCRIBQ14160 1630 aa9.14□□□□□ -0.95
SEMA6D-210ENST00000558816 RSF1Q96T23 1441 aaPredicted RBP9.08□□□□□ -0.96
SEMA6D-210ENST00000558816 PABPN1Q86U42 306 aaKnown RBP eCLIP9.08□□□□□ -0.96
SEMA6D-210ENST00000558816 PHF23Q9BUL5 403 aaPredicted RBP9.06□□□□□ -0.96
SEMA6D-210ENST00000558816 BICRAQ9NZM4 1560 aa8.98□□□□□ -0.97
SEMA6D-210ENST00000558816 SMARCA4P51532 1647 aa8.98□□□□□ -0.97
SEMA6D-210ENST00000558816 TOP2AP11388 1531 aaKnown RBP8.97□□□□□ -0.97
SEMA6D-210ENST00000558816 WIZO95785 1651 aa8.96□□□□□ -0.98
SEMA6D-210ENST00000558816 PRDM2Q13029 1718 aa8.95□□□□□ -0.98
SEMA6D-210ENST00000558816 MROH2BQ7Z745 1585 aa8.95□□□□□ -0.98
SEMA6D-210ENST00000558816 SMARCA2P51531 1590 aa8.92□□□□□ -0.98
SEMA6D-210ENST00000558816 PLPPR3Q6T4P5 718 aa8.92□□□□□ -0.98
SEMA6D-210ENST00000558816 APLP2Q06481 763 aa8.88□□□□□ -0.99
SEMA6D-210ENST00000558816 BIVM-ERCC5R4GMW8 1640 aa8.84□□□□□ -0.99
SEMA6D-210ENST00000558816 WRNQ14191 1432 aaPredicted RBP eCLIP8.82□□□□□ -1
SEMA6D-210ENST00000558816 CECR2Q9BXF3 1484 aa8.81□□□□□ -1
SEMA6D-210ENST00000558816 BAZ1BQ9UIG0 1483 aaKnown RBP8.81□□□□□ -1
SEMA6D-210ENST00000558816 KIF21BO75037 1637 aa8.8□□□□□ -1
SEMA6D-210ENST00000558816 HMGXB3Q12766 1538 aa8.74□□□□□ -1.01
SEMA6D-210ENST00000558816 NCAPD3P42695 1498 aa8.74□□□□□ -1.01
SEMA6D-210ENST00000558816 HRCP23327 699 aa8.74□□□□□ -1.01
SEMA6D-210ENST00000558816 CC2D2AQ9P2K1 1620 aa8.72□□□□□ -1.01
SEMA6D-210ENST00000558816 ATAD2BQ9ULI0 1458 aa8.71□□□□□ -1.02
SEMA6D-210ENST00000558816 RTN4Q9NQC3 1192 aaKnown RBP8.7□□□□□ -1.02
SEMA6D-210ENST00000558816 TOP2BQ02880 1626 aa8.67□□□□□ -1.02
SEMA6D-210ENST00000558816 PDS5BQ9NTI5 1447 aa8.67□□□□□ -1.02
SEMA6D-210ENST00000558816 CCDC88BA6NC98 1476 aa8.66□□□□□ -1.02
SEMA6D-210ENST00000558816 ERCC6Q03468 1493 aa8.65□□□□□ -1.03
SEMA6D-210ENST00000558816 KCNA4P22459 653 aa8.64□□□□□ -1.03
SEMA6D-210ENST00000558816 TRIM41Q8WV44 630 aa8.64□□□□□ -1.03
SEMA6D-210ENST00000558816 EEA1Q15075 1411 aa8.63□□□□□ -1.03
SEMA6D-210ENST00000558816 SYNJ1O43426 1573 aa8.62□□□□□ -1.03
SEMA6D-210ENST00000558816 ERICH3Q5RHP9 1530 aa8.6□□□□□ -1.03
SEMA6D-210ENST00000558816 ATP1B4Q9UN42 357 aaPredicted RBP8.6□□□□□ -1.03
SEMA6D-210ENST00000558816 WDR97A6NE52 1622 aa8.59□□□□□ -1.03
SEMA6D-210ENST00000558816 ABCC8Q09428 1581 aa8.58□□□□□ -1.04
SEMA6D-210ENST00000558816 CSRNP3Q8WYN3 585 aa8.57□□□□□ -1.04
SEMA6D-210ENST00000558816 CADPSQ9ULU8 1353 aa8.56□□□□□ -1.04
SEMA6D-210ENST00000558816 CUX2O14529 1486 aa8.56□□□□□ -1.04
SEMA6D-210ENST00000558816 UBTFP17480 764 aaKnown RBP8.56□□□□□ -1.04
SEMA6D-210ENST00000558816 LAMC3Q9Y6N6 1575 aa8.55□□□□□ -1.04
SEMA6D-210ENST00000558816 RANGAP1P46060 587 aaPredicted RBP8.52□□□□□ -1.05
SEMA6D-210ENST00000558816 PCGF6Q9BYE7 350 aa8.51□□□□□ -1.05
SEMA6D-210ENST00000558816 CEP164Q9UPV0 1460 aa8.51□□□□□ -1.05
SEMA6D-210ENST00000558816 MAP3K1Q13233 1512 aa8.5□□□□□ -1.05
SEMA6D-210ENST00000558816 TNIKQ9UKE5 1360 aa8.49□□□□□ -1.05
SEMA6D-210ENST00000558816 CFAP43Q8NDM7 1665 aa8.48□□□□□ -1.05
SEMA6D-210ENST00000558816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.47□□□□□ -1.05
SEMA6D-210ENST00000558816 HNRNPUL2Q1KMD3 747 aaKnown RBP8.47□□□□□ -1.05
SEMA6D-210ENST00000558816 MYT1LQ9UL68 1186 aa8.47□□□□□ -1.05
SEMA6D-210ENST00000558816 PRXQ9BXM0 1461 aa8.46□□□□□ -1.06
SEMA6D-210ENST00000558816 MRC2Q9UBG0 1479 aa8.44□□□□□ -1.06
SEMA6D-210ENST00000558816 DNAJC5BQ9UF47 199 aa8.44□□□□□ -1.06
SEMA6D-210ENST00000558816 CFTRP13569 1480 aa8.44□□□□□ -1.06
SEMA6D-210ENST00000558816 KIF21AQ7Z4S6 1674 aa8.43□□□□□ -1.06
SEMA6D-210ENST00000558816 FANCD2Q9BXW9 1451 aa8.43□□□□□ -1.06
SEMA6D-210ENST00000558816 TRIM26Q12899 539 aaPredicted RBP8.43□□□□□ -1.06
SEMA6D-210ENST00000558816 LRRIQ1Q96JM4 1722 aa8.41□□□□□ -1.06
SEMA6D-210ENST00000558816 CUX1P39880 1505 aa8.39□□□□□ -1.07
SEMA6D-210ENST00000558816 TTBK1Q5TCY1 1321 aaPredicted RBP8.39□□□□□ -1.07
SEMA6D-210ENST00000558816 GOLGA3Q08378 1498 aa8.39□□□□□ -1.07
SEMA6D-210ENST00000558816 RUSC2Q8N2Y8 1516 aa8.37□□□□□ -1.07
SEMA6D-210ENST00000558816 LOC105371045A0A1W2PR82 267 aa8.37□□□□□ -1.07
SEMA6D-210ENST00000558816 CTTNBP2Q8WZ74 1663 aa8.36□□□□□ -1.07
SEMA6D-210ENST00000558816 CEP162Q5TB80 1403 aa8.35□□□□□ -1.07
SEMA6D-210ENST00000558816 IFT140Q96RY7 1462 aa8.35□□□□□ -1.07
SEMA6D-210ENST00000558816 ARAP1Q96P48 1450 aa8.34□□□□□ -1.07
SEMA6D-210ENST00000558816 SOGA1O94964 1423 aa8.34□□□□□ -1.07
SEMA6D-210ENST00000558816 FBLN2P98095 1184 aa8.34□□□□□ -1.08
SEMA6D-210ENST00000558816 SAMD9Q5K651 1589 aa8.33□□□□□ -1.08
SEMA6D-210ENST00000558816 PRKCSHP14314 528 aaPredicted RBP8.32□□□□□ -1.08
SEMA6D-210ENST00000558816 DNMBPQ6XZF7 1577 aa8.32□□□□□ -1.08
SEMA6D-210ENST00000558816 ABCA5Q8WWZ7 1642 aa8.32□□□□□ -1.08
SEMA6D-210ENST00000558816 RRBP1Q9P2E9 1410 aaKnown RBP8.31□□□□□ -1.08
SEMA6D-210ENST00000558816 CUL7Q14999 1698 aa8.31□□□□□ -1.08
SEMA6D-210ENST00000558816 ADRA2BP18089 450 aa8.3□□□□□ -1.08
SEMA6D-210ENST00000558816 KIF27Q86VH2 1401 aa8.3□□□□□ -1.08
SEMA6D-210ENST00000558816 PPARGC1BQ86YN6 1023 aaKnown RBP8.3□□□□□ -1.08
SEMA6D-210ENST00000558816 POLR1AO95602 1720 aaPredicted RBP8.29□□□□□ -1.08
SEMA6D-210ENST00000558816 ARHGEF11O15085 1522 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms