RNA–Protein interactions for RNA: ENST00000558660.1

MRPL46-203, Transcript of mitochondrial ribosomal protein L46, humanhuman

TSL 2

Gene MRPL46, Length 5,561 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL46-203ENST00000558660 ATAD2BQ9ULI0 1458 aa12.16□□□□□ -0.46
MRPL46-203ENST00000558660 IRX6P78412 446 aaPredicted RBP12.14□□□□□ -0.47
MRPL46-203ENST00000558660 PPP4R2Q9NY27 417 aa12.14□□□□□ -0.47
MRPL46-203ENST00000558660 ERICH6BQ5W0A0 696 aa12.13□□□□□ -0.47
MRPL46-203ENST00000558660 CCNB3Q8WWL7 1395 aa12.13□□□□□ -0.47
MRPL46-203ENST00000558660 PPM1GO15355 546 aaPredicted RBP12.13□□□□□ -0.47
MRPL46-203ENST00000558660 ERICH3Q5RHP9 1530 aa12.12□□□□□ -0.47
MRPL46-203ENST00000558660 FAM9BQ8IZU0 186 aa12.1□□□□□ -0.47
MRPL46-203ENST00000558660 ANP32BQ92688 251 aaKnown RBP12.09□□□□□ -0.47
MRPL46-203ENST00000558660 NEFMP07197 916 aa12.07□□□□□ -0.48
MRPL46-203ENST00000558660 MTUS2Q5JR59 1369 aa12.06□□□□□ -0.48
MRPL46-203ENST00000558660 CCER2I3L3R5 266 aa12.06□□□□□ -0.48
MRPL46-203ENST00000558660 RTN4Q9NQC3 1192 aaKnown RBP12.06□□□□□ -0.48
MRPL46-203ENST00000558660 PEG3Q9GZU2 1588 aa12.05□□□□□ -0.48
MRPL46-203ENST00000558660 SETD5Q9C0A6 1442 aa12.04□□□□□ -0.48
MRPL46-203ENST00000558660 CARMIL1Q5VZK9 1371 aa12.04□□□□□ -0.48
MRPL46-203ENST00000558660 CANXP27824 592 aaKnown RBP12.03□□□□□ -0.48
MRPL46-203ENST00000558660 MRS2Q9HD23 443 aa12.03□□□□□ -0.48
MRPL46-203ENST00000558660 UPF2Q9HAU5 1272 aaKnown RBP12.02□□□□□ -0.49
MRPL46-203ENST00000558660 RAPGEF2Q9Y4G8 1499 aa12.01□□□□□ -0.49
MRPL46-203ENST00000558660 CUX2O14529 1486 aa12.01□□□□□ -0.49
MRPL46-203ENST00000558660 NCAPD3P42695 1498 aa12□□□□□ -0.49
MRPL46-203ENST00000558660 FMN1Q68DA7 1419 aa12□□□□□ -0.49
MRPL46-203ENST00000558660 ARHGAP35Q9NRY4 1499 aa11.99□□□□□ -0.49
MRPL46-203ENST00000558660 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
MRPL46-203ENST00000558660 FANCIQ9NVI1 1328 aa11.99□□□□□ -0.49
MRPL46-203ENST00000558660 TOP2BQ02880 1626 aa11.98□□□□□ -0.49
MRPL46-203ENST00000558660 ZNF326Q5BKZ1 582 aaKnown RBP11.97□□□□□ -0.49
MRPL46-203ENST00000558660 LAS1LQ9Y4W2 734 aaKnown RBP11.96□□□□□ -0.49
MRPL46-203ENST00000558660 BECN1Q14457 450 aa11.95□□□□□ -0.5
MRPL46-203ENST00000558660 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.95□□□□□ -0.5
MRPL46-203ENST00000558660 EIF4G1Q04637 1599 aaKnown RBP11.95□□□□□ -0.5
MRPL46-203ENST00000558660 CADPSQ9ULU8 1353 aa11.94□□□□□ -0.5
MRPL46-203ENST00000558660 NAP1L5Q96NT1 182 aaPredicted RBP11.93□□□□□ -0.5
MRPL46-203ENST00000558660 P3H3Q8IVL6 736 aa11.93□□□□□ -0.5
MRPL46-203ENST00000558660 DHX57Q6P158 1386 aaKnown RBP11.92□□□□□ -0.5
MRPL46-203ENST00000558660 EIF4G2P78344 907 aaKnown RBP eCLIP11.92□□□□□ -0.5
MRPL46-203ENST00000558660 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
MRPL46-203ENST00000558660 TMC1Q8TDI8 760 aa11.91□□□□□ -0.5
MRPL46-203ENST00000558660 RRBP1Q9P2E9 1410 aaKnown RBP11.91□□□□□ -0.5
MRPL46-203ENST00000558660 HIRIP3Q9BW71 556 aaPredicted RBP11.9□□□□□ -0.5
MRPL46-203ENST00000558660 SYNJ1O43426 1573 aa11.9□□□□□ -0.5
MRPL46-203ENST00000558660 TRIM44Q96DX7 344 aaPredicted RBP11.9□□□□□ -0.5
MRPL46-203ENST00000558660 B4GALNT3Q6L9W6 998 aa11.9□□□□□ -0.5
MRPL46-203ENST00000558660 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
MRPL46-203ENST00000558660 MAP3K1Q13233 1512 aa11.89□□□□□ -0.51
MRPL46-203ENST00000558660 PRXQ9BXM0 1461 aa11.89□□□□□ -0.51
MRPL46-203ENST00000558660 IPO9Q96P70 1041 aaKnown RBP11.89□□□□□ -0.51
MRPL46-203ENST00000558660 L1TD1Q5T7N2 865 aaKnown RBP11.88□□□□□ -0.51
MRPL46-203ENST00000558660 PRKCSHP14314 528 aaPredicted RBP11.88□□□□□ -0.51
MRPL46-203ENST00000558660 ARXQ96QS3 562 aa11.87□□□□□ -0.51
MRPL46-203ENST00000558660 RAB3GAP2Q9H2M9 1393 aa11.87□□□□□ -0.51
MRPL46-203ENST00000558660 HSP90AA1P07900 732 aaKnown RBP11.86□□□□□ -0.51
MRPL46-203ENST00000558660 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
MRPL46-203ENST00000558660 CFTRP13569 1480 aa11.85□□□□□ -0.51
MRPL46-203ENST00000558660 EFCAB5A4FU69 1503 aa11.85□□□□□ -0.51
MRPL46-203ENST00000558660 CUX1P39880 1505 aa11.85□□□□□ -0.51
MRPL46-203ENST00000558660 RSPH6AQ9H0K4 717 aa11.85□□□□□ -0.51
MRPL46-203ENST00000558660 TNNT2P45379 298 aaPredicted RBP11.84□□□□□ -0.51
MRPL46-203ENST00000558660 USP35Q9P2H5 1018 aa11.84□□□□□ -0.51
MRPL46-203ENST00000558660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.84□□□□□ -0.51
MRPL46-203ENST00000558660 BIVM-ERCC5R4GMW8 1640 aa11.83□□□□□ -0.51
MRPL46-203ENST00000558660 SLC4A1APQ9BWU0 796 aaKnown RBP11.83□□□□□ -0.52
MRPL46-203ENST00000558660 KANK4Q5T7N3 995 aaPredicted RBP11.82□□□□□ -0.52
MRPL46-203ENST00000558660 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
MRPL46-203ENST00000558660 FYCO1Q9BQS8 1478 aa11.79□□□□□ -0.52
MRPL46-203ENST00000558660 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
MRPL46-203ENST00000558660 TCERG1O14776 1098 aaKnown RBP11.78□□□□□ -0.52
MRPL46-203ENST00000558660 CCDC18Q5T9S5 1454 aa11.78□□□□□ -0.52
MRPL46-203ENST00000558660 IGF1RP08069 1367 aa11.78□□□□□ -0.52
MRPL46-203ENST00000558660 PPP1R15AO75807 674 aaPredicted RBP11.78□□□□□ -0.52
MRPL46-203ENST00000558660 SALL2Q9Y467 1007 aaPredicted RBP11.77□□□□□ -0.52
MRPL46-203ENST00000558660 LRRC9Q6ZRR7 1453 aa11.77□□□□□ -0.53
MRPL46-203ENST00000558660 CASKIN1Q8WXD9 1431 aa11.77□□□□□ -0.53
MRPL46-203ENST00000558660 TSPY4P0CV99 314 aa11.76□□□□□ -0.53
MRPL46-203ENST00000558660 TSPY10P0CW01 314 aa11.76□□□□□ -0.53
MRPL46-203ENST00000558660 SIN3AQ96ST3 1273 aa11.76□□□□□ -0.53
MRPL46-203ENST00000558660 WDR43Q15061 677 aaKnown RBP eCLIP11.76□□□□□ -0.53
MRPL46-203ENST00000558660 FANCD2Q9BXW9 1451 aa11.75□□□□□ -0.53
MRPL46-203ENST00000558660 UNC13AQ9UPW8 1703 aa11.75□□□□□ -0.53
MRPL46-203ENST00000558660 GOLGA6L22H0YM25 854 aa11.74□□□□□ -0.53
MRPL46-203ENST00000558660 AQRO60306 1485 aaKnown RBP eCLIP11.74□□□□□ -0.538e-9■■■■■ 32
MRPL46-203ENST00000558660 FGD5Q6ZNL6 1462 aa11.74□□□□□ -0.53
MRPL46-203ENST00000558660 SLC24A1O60721 1099 aa11.74□□□□□ -0.53
MRPL46-203ENST00000558660 TIAM1Q13009 1591 aa11.73□□□□□ -0.53
MRPL46-203ENST00000558660 ROCK2O75116 1388 aaKnown RBP11.7□□□□□ -0.54
MRPL46-203ENST00000558660 UACAQ9BZF9 1416 aa11.7□□□□□ -0.54
MRPL46-203ENST00000558660 PLEKHD1A6NEE1 506 aa11.69□□□□□ -0.54
MRPL46-203ENST00000558660 NCLP19338 710 aaKnown RBP11.69□□□□□ -0.54
MRPL46-203ENST00000558660 GSE1Q14687 1217 aa11.69□□□□□ -0.54
MRPL46-203ENST00000558660 CDCA8Q53HL2 280 aa11.69□□□□□ -0.54
MRPL46-203ENST00000558660 CHIC2Q9UKJ5 165 aa11.69□□□□□ -0.54
MRPL46-203ENST00000558660 CUL7Q14999 1698 aa11.68□□□□□ -0.54
MRPL46-203ENST00000558660 RRP7BPQ9NSQ0 103 aa11.68□□□□□ -0.54
MRPL46-203ENST00000558660 PNNQ9H307 717 aaKnown RBP11.68□□□□□ -0.54
MRPL46-203ENST00000558660 FGD6Q6ZV73 1430 aa11.68□□□□□ -0.54
MRPL46-203ENST00000558660 KCNH8Q96L42 1107 aa11.68□□□□□ -0.54
MRPL46-203ENST00000558660 CARMIL2Q6F5E8 1435 aa11.67□□□□□ -0.54
MRPL46-203ENST00000558660 ZNF777Q9ULD5 760 aaPredicted RBP11.67□□□□□ -0.54
MRPL46-203ENST00000558660 NUDCQ9Y266 331 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms