RNA–Protein interactions for RNA: ENST00000557963.1

ALDH1A3-203, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

BASIC

Gene ALDH1A3, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-203ENST00000557963 CHD1O14646 1710 aa36.64■■■■□ 3.46
ALDH1A3-203ENST00000557963 NUP160Q12769 1436 aa36.6■■■■□ 3.45
ALDH1A3-203ENST00000557963 CEP170Q5SW79 1584 aa36.58■■■■□ 3.45
ALDH1A3-203ENST00000557963 RANGAP1P46060 587 aaPredicted RBP36.54■■■■□ 3.44
ALDH1A3-203ENST00000557963 KIAA0586Q9BVV6 1533 aa36.54■■■■□ 3.44
ALDH1A3-203ENST00000557963 CLIP1P30622 1438 aa36.53■■■■□ 3.44
ALDH1A3-203ENST00000557963 IQGAP2Q13576 1575 aa36.51■■■■□ 3.44
ALDH1A3-203ENST00000557963 ARHGAP35Q9NRY4 1499 aa36.35■■■■□ 3.41
ALDH1A3-203ENST00000557963 EFCAB5A4FU69 1503 aa36.34■■■■□ 3.41
ALDH1A3-203ENST00000557963 UGGT2Q9NYU1 1516 aa36.33■■■■□ 3.41
ALDH1A3-203ENST00000557963 JPH4Q96JJ6 628 aa36.27■■■■□ 3.4
ALDH1A3-203ENST00000557963 CLASP1Q7Z460 1538 aa36.27■■■■□ 3.4
ALDH1A3-203ENST00000557963 SAMD9Q5K651 1589 aa36.26■■■■□ 3.4
ALDH1A3-203ENST00000557963 OSCARQ8IYS5 282 aa36.25■■■■□ 3.39
ALDH1A3-203ENST00000557963 ARAP1Q96P48 1450 aa36.24■■■■□ 3.39
ALDH1A3-203ENST00000557963 P3H3Q8IVL6 736 aa36.2■■■■□ 3.39
ALDH1A3-203ENST00000557963 DISP1Q96F81 1524 aa36.17■■■■□ 3.38
ALDH1A3-203ENST00000557963 FHOD3Q2V2M9 1422 aa36.16■■■■□ 3.38
ALDH1A3-203ENST00000557963 SHROOM2Q13796 1616 aa36.16■■■■□ 3.38
ALDH1A3-203ENST00000557963 KIAA0556O60303 1618 aa36.14■■■■□ 3.38
ALDH1A3-203ENST00000557963 CARMIL2Q6F5E8 1435 aa36.13■■■■□ 3.37
ALDH1A3-203ENST00000557963 VPS8Q8N3P4 1428 aa36.12■■■■□ 3.37
ALDH1A3-203ENST00000557963 PRG4Q92954 1404 aaPredicted RBP36.1■■■■□ 3.37
ALDH1A3-203ENST00000557963 FMN1Q68DA7 1419 aa36.02■■■■□ 3.36
ALDH1A3-203ENST00000557963 ERCC6L2Q5T890 1561 aa35.9■■■■□ 3.34
ALDH1A3-203ENST00000557963 TTBK1Q5TCY1 1321 aaPredicted RBP35.87■■■■□ 3.33
ALDH1A3-203ENST00000557963 PCF11O94913 1555 aaKnown RBP35.85■■■■□ 3.33
ALDH1A3-203ENST00000557963 CASKIN1Q8WXD9 1431 aa35.84■■■■□ 3.33
ALDH1A3-203ENST00000557963 FYCO1Q9BQS8 1478 aa35.83■■■■□ 3.33
ALDH1A3-203ENST00000557963 PTPRGP23470 1445 aa35.82■■■■□ 3.32
ALDH1A3-203ENST00000557963 APLP2Q06481 763 aa35.76■■■■□ 3.32
ALDH1A3-203ENST00000557963 ATP1B4Q9UN42 357 aaPredicted RBP35.75■■■■□ 3.31
ALDH1A3-203ENST00000557963 RAPGEF6Q8TEU7 1601 aa35.7■■■■□ 3.31
ALDH1A3-203ENST00000557963 PLB1Q6P1J6 1458 aa35.7■■■■□ 3.31
ALDH1A3-203ENST00000557963 HECW1Q76N89 1606 aa35.69■■■■□ 3.3
ALDH1A3-203ENST00000557963 ABCA8O94911 1581 aa35.66■■■■□ 3.3
ALDH1A3-203ENST00000557963 ARHGEF11O15085 1522 aa35.64■■■■□ 3.3
ALDH1A3-203ENST00000557963 MAP3K1Q13233 1512 aa35.62■■■■□ 3.29
ALDH1A3-203ENST00000557963 UACAQ9BZF9 1416 aa35.61■■■■□ 3.29
ALDH1A3-203ENST00000557963 NUP153P49790 1475 aaKnown RBP35.6■■■■□ 3.29
ALDH1A3-203ENST00000557963 TIAM1Q13009 1591 aa35.59■■■■□ 3.29
ALDH1A3-203ENST00000557963 CCDC18Q5T9S5 1454 aa35.58■■■■□ 3.29
ALDH1A3-203ENST00000557963 EPRSP07814 1512 aaKnown RBP35.56■■■■□ 3.28
ALDH1A3-203ENST00000557963 CFAP43Q8NDM7 1665 aa35.55■■■■□ 3.28
ALDH1A3-203ENST00000557963 PPARGC1BQ86YN6 1023 aaKnown RBP35.54■■■■□ 3.28
ALDH1A3-203ENST00000557963 LRRIQ1Q96JM4 1722 aa35.54■■■■□ 3.28
ALDH1A3-203ENST00000557963 ABCC2Q92887 1545 aa35.51■■■■□ 3.28
ALDH1A3-203ENST00000557963 ARID3CA6NKF2 412 aa35.49■■■■□ 3.27
ALDH1A3-203ENST00000557963 RIMBP3CA6NJZ7 1639 aa35.49■■■■□ 3.27
ALDH1A3-203ENST00000557963 RIMBP3BA6NNM3 1639 aa35.49■■■■□ 3.27
ALDH1A3-203ENST00000557963 RIMBP3Q9UFD9 1639 aa35.49■■■■□ 3.27
ALDH1A3-203ENST00000557963 CDK13Q14004 1512 aaKnown RBP35.48■■■■□ 3.27
ALDH1A3-203ENST00000557963 UHRF1BP1LA0JNW5 1464 aa35.48■■■■□ 3.27
ALDH1A3-203ENST00000557963 KANK4Q5T7N3 995 aaPredicted RBP35.46■■■■□ 3.27
ALDH1A3-203ENST00000557963 LRRC9Q6ZRR7 1453 aa35.43■■■■□ 3.26
ALDH1A3-203ENST00000557963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.41■■■■□ 3.26
ALDH1A3-203ENST00000557963 HNRNPUL2Q1KMD3 747 aaKnown RBP35.41■■■■□ 3.26
ALDH1A3-203ENST00000557963 ATP10BO94823 1461 aa35.4■■■■□ 3.26
ALDH1A3-203ENST00000557963 ADCY10Q96PN6 1610 aa35.37■■■■□ 3.25
ALDH1A3-203ENST00000557963 MTUS2Q5JR59 1369 aa35.36■■■■□ 3.25
ALDH1A3-203ENST00000557963 CDK11AQ9UQ88 783 aaPredicted RBP35.35■■■■□ 3.25
ALDH1A3-203ENST00000557963 KDM5BQ9UGL1 1544 aa35.32■■■■□ 3.24
ALDH1A3-203ENST00000557963 EHBP1L1Q8N3D4 1523 aa35.3■■■■□ 3.24
ALDH1A3-203ENST00000557963 MAGI3Q5TCQ9 1506 aa35.3■■■■□ 3.24
ALDH1A3-203ENST00000557963 CYB5RLQ6IPT4 315 aa35.29■■■■□ 3.24
ALDH1A3-203ENST00000557963 ZCCHC11Q5TAX3 1644 aaKnown RBP35.24■■■■□ 3.23
ALDH1A3-203ENST00000557963 PLEKHD1A6NEE1 506 aa35.23■■■■□ 3.23
ALDH1A3-203ENST00000557963 TROQ12816 1431 aaPredicted RBP35.21■■■■□ 3.23
ALDH1A3-203ENST00000557963 NPM1P06748 294 aaKnown RBP eCLIP35.16■■■■□ 3.22
ALDH1A3-203ENST00000557963 SUPT6HQ7KZ85 1726 aaKnown RBP35.16■■■■□ 3.22
ALDH1A3-203ENST00000557963 NCOA2Q15596 1464 aa35.12■■■■□ 3.21
ALDH1A3-203ENST00000557963 TRIM26Q12899 539 aaPredicted RBP35.08■■■■□ 3.21
ALDH1A3-203ENST00000557963 PHLDB1Q86UU1 1377 aa35.06■■■■□ 3.2
ALDH1A3-203ENST00000557963 DNAJC5Q9H3Z4 198 aa35.05■■■■□ 3.2
ALDH1A3-203ENST00000557963 KIF14Q15058 1648 aa35.04■■■■□ 3.2
ALDH1A3-203ENST00000557963 WDR7Q9Y4E6 1490 aa35.01■■■■□ 3.2
ALDH1A3-203ENST00000557963 ASXL2Q76L83 1435 aa35.01■■■■□ 3.19
ALDH1A3-203ENST00000557963 MYOM3Q5VTT5 1437 aa34.95■■■■□ 3.18
ALDH1A3-203ENST00000557963 CCNB3Q8WWL7 1395 aa34.94■■■■□ 3.18
ALDH1A3-203ENST00000557963 KCNH8Q96L42 1107 aa34.94■■■■□ 3.18
ALDH1A3-203ENST00000557963 RRBP1Q9P2E9 1410 aaKnown RBP34.93■■■■□ 3.18
ALDH1A3-203ENST00000557963 ABCC10Q5T3U5 1492 aa34.92■■■■□ 3.18
ALDH1A3-203ENST00000557963 MAPKBP1O60336 1514 aa34.91■■■■□ 3.18
ALDH1A3-203ENST00000557963 FGD6Q6ZV73 1430 aa34.87■■■■□ 3.17
ALDH1A3-203ENST00000557963 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.86■■■■□ 3.17
ALDH1A3-203ENST00000557963 PCGF6Q9BYE7 350 aa34.84■■■■□ 3.17
ALDH1A3-203ENST00000557963 GPATCH8Q9UKJ3 1502 aaKnown RBP34.83■■■■□ 3.17
ALDH1A3-203ENST00000557963 MIA2Q96PC5 1412 aa34.82■■■■□ 3.17
ALDH1A3-203ENST00000557963 TTC37Q6PGP7 1564 aa34.82■■■■□ 3.16
ALDH1A3-203ENST00000557963 ITSN2Q9NZM3 1697 aa34.82■■■■□ 3.16
ALDH1A3-203ENST00000557963 CFDP1Q9UEE9 299 aaPredicted RBP34.76■■■■□ 3.15
ALDH1A3-203ENST00000557963 CDC42BPAQ5VT25 1732 aa34.75■■■■□ 3.15
ALDH1A3-203ENST00000557963 FAM50AQ14320 339 aaKnown RBP34.73■■■■□ 3.15
ALDH1A3-203ENST00000557963 ABCA9Q8IUA7 1624 aa34.73■■■■□ 3.15
ALDH1A3-203ENST00000557963 PTPN23Q9H3S7 1636 aa34.73■■■■□ 3.15
ALDH1A3-203ENST00000557963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.73■■■■□ 3.15
ALDH1A3-203ENST00000557963 PREX2Q70Z35 1606 aa34.71■■■■□ 3.15
ALDH1A3-203ENST00000557963 TCOF1Q13428 1488 aaKnown RBP34.7■■■■□ 3.15
ALDH1A3-203ENST00000557963 MYO5CQ9NQX4 1742 aa34.7■■■■□ 3.14
ALDH1A3-203ENST00000557963 PLCH2O75038 1416 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms