RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 JPH4Q96JJ6 628 aa20.47■□□□□ 0.87
RCCD1-209ENST00000557750 IGF1RP08069 1367 aa20.45■□□□□ 0.86
RCCD1-209ENST00000557750 RUSC2Q8N2Y8 1516 aa20.45■□□□□ 0.86
RCCD1-209ENST00000557750 KIF13AQ9H1H9 1805 aa20.4■□□□□ 0.86
RCCD1-209ENST00000557750 FAM9AQ8IZU1 332 aaPredicted RBP20.35■□□□□ 0.85
RCCD1-209ENST00000557750 CARMIL1Q5VZK9 1371 aa20.34■□□□□ 0.85
RCCD1-209ENST00000557750 FAM69CQ0P6D2 419 aa20.34■□□□□ 0.85
RCCD1-209ENST00000557750 EEA1Q15075 1411 aa20.33■□□□□ 0.85
RCCD1-209ENST00000557750 NPM1P06748 294 aaKnown RBP eCLIP20.32■□□□□ 0.84
RCCD1-209ENST00000557750 CUL7Q14999 1698 aa20.31■□□□□ 0.84
RCCD1-209ENST00000557750 ABCC10Q5T3U5 1492 aa20.31■□□□□ 0.84
RCCD1-209ENST00000557750 CSRNP3Q8WYN3 585 aa20.3■□□□□ 0.84
RCCD1-209ENST00000557750 MAPKBP1O60336 1514 aa20.27■□□□□ 0.84
RCCD1-209ENST00000557750 ADCY10Q96PN6 1610 aa20.26■□□□□ 0.83
RCCD1-209ENST00000557750 KIAA0586Q9BVV6 1533 aa20.24■□□□□ 0.83
RCCD1-209ENST00000557750 RAPGEF2Q9Y4G8 1499 aa20.23■□□□□ 0.83
RCCD1-209ENST00000557750 DIP2BQ9P265 1576 aa20.23■□□□□ 0.83
RCCD1-209ENST00000557750 PRXQ9BXM0 1461 aa20.21■□□□□ 0.83
RCCD1-209ENST00000557750 PTPRGP23470 1445 aa20.13■□□□□ 0.81
RCCD1-209ENST00000557750 KDM6BO15054 1643 aa20.12■□□□□ 0.81
RCCD1-209ENST00000557750 TTBK1Q5TCY1 1321 aaPredicted RBP20.12■□□□□ 0.81
RCCD1-209ENST00000557750 KDM4FA0A1W2PPD8 638 aa20.1■□□□□ 0.81
RCCD1-209ENST00000557750 TSPOAP1O95153 1857 aa20.1■□□□□ 0.81
RCCD1-209ENST00000557750 EHMT2Q96KQ7 1210 aa20.1■□□□□ 0.81
RCCD1-209ENST00000557750 KIF21BO75037 1637 aa20.06■□□□□ 0.8
RCCD1-209ENST00000557750 TNIKQ9UKE5 1360 aa20.06■□□□□ 0.8
RCCD1-209ENST00000557750 CARMIL2Q6F5E8 1435 aa20.04■□□□□ 0.8
RCCD1-209ENST00000557750 ABCC2Q92887 1545 aa20.03■□□□□ 0.8
RCCD1-209ENST00000557750 GOLGA3Q08378 1498 aa20.02■□□□□ 0.79
RCCD1-209ENST00000557750 ASXL2Q76L83 1435 aa20.01■□□□□ 0.79
RCCD1-209ENST00000557750 UBTFP17480 764 aaKnown RBP20■□□□□ 0.79
RCCD1-209ENST00000557750 IQGAP2Q13576 1575 aa20■□□□□ 0.79
RCCD1-209ENST00000557750 PLB1Q6P1J6 1458 aa19.98■□□□□ 0.79
RCCD1-209ENST00000557750 UHRF1BP1LA0JNW5 1464 aa19.97■□□□□ 0.79
RCCD1-209ENST00000557750 GLI2P10070 1586 aa19.96■□□□□ 0.79
RCCD1-209ENST00000557750 UACAQ9BZF9 1416 aa19.96■□□□□ 0.79
RCCD1-209ENST00000557750 DISP1Q96F81 1524 aa19.95■□□□□ 0.78
RCCD1-209ENST00000557750 CTTNBP2Q8WZ74 1663 aa19.94■□□□□ 0.78
RCCD1-209ENST00000557750 PPRC1Q5VV67 1664 aaKnown RBP19.94■□□□□ 0.78
RCCD1-209ENST00000557750 RANGAP1P46060 587 aaPredicted RBP19.91■□□□□ 0.78
RCCD1-209ENST00000557750 UGGT2Q9NYU1 1516 aa19.9■□□□□ 0.78
RCCD1-209ENST00000557750 EPRSP07814 1512 aaKnown RBP19.88■□□□□ 0.77
RCCD1-209ENST00000557750 KDM5BQ9UGL1 1544 aa19.88■□□□□ 0.77
RCCD1-209ENST00000557750 COL17A1Q9UMD9 1497 aaPredicted RBP19.88■□□□□ 0.77
RCCD1-209ENST00000557750 ADGRL1O94910 1474 aa19.84■□□□□ 0.77
RCCD1-209ENST00000557750 LOC105371045A0A1W2PR82 267 aa19.83■□□□□ 0.76
RCCD1-209ENST00000557750 MAP3K4Q9Y6R4 1608 aa19.83■□□□□ 0.76
RCCD1-209ENST00000557750 ZCCHC11Q5TAX3 1644 aaKnown RBP19.82■□□□□ 0.76
RCCD1-209ENST00000557750 KIAA0556O60303 1618 aa19.82■□□□□ 0.76
RCCD1-209ENST00000557750 P3H3Q8IVL6 736 aa19.81■□□□□ 0.76
RCCD1-209ENST00000557750 TEX14Q8IWB6 1497 aa19.8■□□□□ 0.76
RCCD1-209ENST00000557750 ILDR1Q86SU0 546 aaPredicted RBP19.75■□□□□ 0.75
RCCD1-209ENST00000557750 WDR7Q9Y4E6 1490 aa19.75■□□□□ 0.75
RCCD1-209ENST00000557750 SAMD9Q5K651 1589 aa19.74■□□□□ 0.75
RCCD1-209ENST00000557750 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
RCCD1-209ENST00000557750 FHOD3Q2V2M9 1422 aa19.71■□□□□ 0.75
RCCD1-209ENST00000557750 KCNH8Q96L42 1107 aa19.69■□□□□ 0.74
RCCD1-209ENST00000557750 ARHGAP35Q9NRY4 1499 aa19.68■□□□□ 0.74
RCCD1-209ENST00000557750 CLIP1P30622 1438 aa19.68■□□□□ 0.74
RCCD1-209ENST00000557750 CD109Q6YHK3 1445 aa19.68■□□□□ 0.74
RCCD1-209ENST00000557750 ABCA8O94911 1581 aa19.67■□□□□ 0.74
RCCD1-209ENST00000557750 MAGI3Q5TCQ9 1506 aa19.67■□□□□ 0.74
RCCD1-209ENST00000557750 CEP162Q5TB80 1403 aa19.65■□□□□ 0.74
RCCD1-209ENST00000557750 HECW2Q9P2P5 1572 aa19.64■□□□□ 0.73
RCCD1-209ENST00000557750 CFAP43Q8NDM7 1665 aa19.62■□□□□ 0.73
RCCD1-209ENST00000557750 ARID3CA6NKF2 412 aa19.58■□□□□ 0.72
RCCD1-209ENST00000557750 FMN1Q68DA7 1419 aa19.57■□□□□ 0.72
RCCD1-209ENST00000557750 ATP10BO94823 1461 aa19.53■□□□□ 0.72
RCCD1-209ENST00000557750 ATP1B4Q9UN42 357 aaPredicted RBP19.52■□□□□ 0.72
RCCD1-209ENST00000557750 ARAP3Q8WWN8 1544 aa19.52■□□□□ 0.72
RCCD1-209ENST00000557750 RAPGEF6Q8TEU7 1601 aa19.51■□□□□ 0.71
RCCD1-209ENST00000557750 NUP153P49790 1475 aaKnown RBP19.48■□□□□ 0.71
RCCD1-209ENST00000557750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.47■□□□□ 0.71
RCCD1-209ENST00000557750 HNRNPUL2Q1KMD3 747 aaKnown RBP19.47■□□□□ 0.71
RCCD1-209ENST00000557750 RAPGEF3O95398 923 aa19.44■□□□□ 0.7
RCCD1-209ENST00000557750 ABCA9Q8IUA7 1624 aa19.44■□□□□ 0.7
RCCD1-209ENST00000557750 PHLDB1Q86UU1 1377 aa19.44■□□□□ 0.7
RCCD1-209ENST00000557750 CASKIN1Q8WXD9 1431 aa19.43■□□□□ 0.7
RCCD1-209ENST00000557750 PCF11O94913 1555 aaKnown RBP19.42■□□□□ 0.7
RCCD1-209ENST00000557750 HECW1Q76N89 1606 aa19.42■□□□□ 0.7
RCCD1-209ENST00000557750 FYCO1Q9BQS8 1478 aa19.4■□□□□ 0.7
RCCD1-209ENST00000557750 PTPRMP28827 1452 aa19.38■□□□□ 0.69
RCCD1-209ENST00000557750 NEO1Q92859 1461 aa19.38■□□□□ 0.69
RCCD1-209ENST00000557750 VPS8Q8N3P4 1428 aa19.38■□□□□ 0.69
RCCD1-209ENST00000557750 ADAMTSL3P82987 1691 aa19.38■□□□□ 0.69
RCCD1-209ENST00000557750 CDK13Q14004 1512 aaKnown RBP19.37■□□□□ 0.69
RCCD1-209ENST00000557750 PLEKHD1A6NEE1 506 aa19.34■□□□□ 0.69
RCCD1-209ENST00000557750 FRMPD1Q5SYB0 1578 aa19.34■□□□□ 0.69
RCCD1-209ENST00000557750 CCDC18Q5T9S5 1454 aa19.33■□□□□ 0.69
RCCD1-209ENST00000557750 ARID4BQ4LE39 1312 aaPredicted RBP19.33■□□□□ 0.68
RCCD1-209ENST00000557750 CDK11AQ9UQ88 783 aaPredicted RBP19.33■□□□□ 0.68
RCCD1-209ENST00000557750 FBXO41Q8TF61 875 aa19.3■□□□□ 0.68
RCCD1-209ENST00000557750 BCORL1Q5H9F3 1711 aa19.3■□□□□ 0.68
RCCD1-209ENST00000557750 MADDQ8WXG6 1647 aa19.28■□□□□ 0.68
RCCD1-209ENST00000557750 DENND4BO75064 1496 aaPredicted RBP19.26■□□□□ 0.67
RCCD1-209ENST00000557750 LRRIQ1Q96JM4 1722 aa19.26■□□□□ 0.67
RCCD1-209ENST00000557750 AKNAQ7Z591 1439 aa19.25■□□□□ 0.67
RCCD1-209ENST00000557750 ARHGEF40Q8TER5 1519 aa19.23■□□□□ 0.67
RCCD1-209ENST00000557750 APLP2Q06481 763 aa19.22■□□□□ 0.67
RCCD1-209ENST00000557750 TROQ12816 1431 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms