RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 NISCHQ9Y2I1 1504 aa29.09■■■□□ 2.25
RCCD1-209ENST00000557750 ABCC9O60706 1549 aa26.39■■□□□ 1.81
RCCD1-209ENST00000557750 CCDC180Q9P1Z9 1646 aa26.07■■□□□ 1.76
RCCD1-209ENST00000557750 DNAJC5BQ9UF47 199 aa25.02■■□□□ 1.6
RCCD1-209ENST00000557750 RB1CC1Q8TDY2 1594 aa24.96■■□□□ 1.59
RCCD1-209ENST00000557750 NACADO15069 1562 aa24.73■■□□□ 1.55
RCCD1-209ENST00000557750 DCAF8L2P0C7V8 631 aa24.64■■□□□ 1.53
RCCD1-209ENST00000557750 PABPN1Q86U42 306 aaKnown RBP eCLIP24.57■■□□□ 1.52
RCCD1-209ENST00000557750 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
RCCD1-209ENST00000557750 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
RCCD1-209ENST00000557750 ZCCHC6Q5VYS8 1495 aaKnown RBP24.29■■□□□ 1.48
RCCD1-209ENST00000557750 BICRAQ9NZM4 1560 aa24.27■■□□□ 1.48
RCCD1-209ENST00000557750 DCAF1Q9Y4B6 1507 aa24.04■■□□□ 1.44
RCCD1-209ENST00000557750 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
RCCD1-209ENST00000557750 CC2D2AQ9P2K1 1620 aa23.79■■□□□ 1.4
RCCD1-209ENST00000557750 SCRIBQ14160 1630 aa23.79■■□□□ 1.4
RCCD1-209ENST00000557750 CECR2Q9BXF3 1484 aa23.79■■□□□ 1.4
RCCD1-209ENST00000557750 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
RCCD1-209ENST00000557750 DNAJC5Q9H3Z4 198 aa23.13■■□□□ 1.29
RCCD1-209ENST00000557750 NCAPD3P42695 1498 aa22.86■■□□□ 1.25
RCCD1-209ENST00000557750 CUX2O14529 1486 aa22.81■■□□□ 1.24
RCCD1-209ENST00000557750 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
RCCD1-209ENST00000557750 ATAD2BQ9ULI0 1458 aa22.77■■□□□ 1.24
RCCD1-209ENST00000557750 SMARCA4P51532 1647 aa22.66■■□□□ 1.22
RCCD1-209ENST00000557750 SMARCA2P51531 1590 aa22.66■■□□□ 1.22
RCCD1-209ENST00000557750 HMGXB3Q12766 1538 aa22.64■■□□□ 1.21
RCCD1-209ENST00000557750 NESP48681 1621 aa22.61■■□□□ 1.21
RCCD1-209ENST00000557750 BAZ1AQ9NRL2 1556 aaPredicted RBP22.53■■□□□ 1.2
RCCD1-209ENST00000557750 BAZ1BQ9UIG0 1483 aaKnown RBP22.52■■□□□ 1.2
RCCD1-209ENST00000557750 MROH2BQ7Z745 1585 aa22.44■■□□□ 1.18
RCCD1-209ENST00000557750 PEG3Q9GZU2 1588 aa22.43■■□□□ 1.18
RCCD1-209ENST00000557750 THOC2Q8NI27 1593 aaKnown RBP22.37■■□□□ 1.17
RCCD1-209ENST00000557750 LAMC3Q9Y6N6 1575 aa22.36■■□□□ 1.17
RCCD1-209ENST00000557750 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
RCCD1-209ENST00000557750 PDS5BQ9NTI5 1447 aa22.26■■□□□ 1.15
RCCD1-209ENST00000557750 KIF21AQ7Z4S6 1674 aa22.25■■□□□ 1.15
RCCD1-209ENST00000557750 WIZO95785 1651 aa22.18■■□□□ 1.14
RCCD1-209ENST00000557750 CADPSQ9ULU8 1353 aa22.17■■□□□ 1.14
RCCD1-209ENST00000557750 MRC2Q9UBG0 1479 aa22.08■■□□□ 1.13
RCCD1-209ENST00000557750 WDR62O43379 1518 aa22.03■■□□□ 1.12
RCCD1-209ENST00000557750 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
RCCD1-209ENST00000557750 SUPT5HO00267 1087 aaKnown RBP22.01■■□□□ 1.11
RCCD1-209ENST00000557750 TOP2AP11388 1531 aaKnown RBP21.98■■□□□ 1.11
RCCD1-209ENST00000557750 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
RCCD1-209ENST00000557750 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
RCCD1-209ENST00000557750 CFTRP13569 1480 aa21.85■■□□□ 1.09
RCCD1-209ENST00000557750 OSCARQ8IYS5 282 aa21.77■■□□□ 1.08
RCCD1-209ENST00000557750 URB2Q14146 1524 aaKnown RBP21.75■■□□□ 1.07
RCCD1-209ENST00000557750 CCDC88BA6NC98 1476 aa21.74■■□□□ 1.07
RCCD1-209ENST00000557750 ZNF608Q9ULD9 1512 aaPredicted RBP21.54■■□□□ 1.04
RCCD1-209ENST00000557750 PRDM2Q13029 1718 aa21.53■■□□□ 1.04
RCCD1-209ENST00000557750 IFT140Q96RY7 1462 aa21.52■■□□□ 1.04
RCCD1-209ENST00000557750 RIMBP3CA6NJZ7 1639 aa21.48■■□□□ 1.03
RCCD1-209ENST00000557750 RIMBP3BA6NNM3 1639 aa21.48■■□□□ 1.03
RCCD1-209ENST00000557750 RIMBP3Q9UFD9 1639 aa21.48■■□□□ 1.03
RCCD1-209ENST00000557750 TOPBP1Q92547 1522 aa21.46■■□□□ 1.03
RCCD1-209ENST00000557750 ARHGEF11O15085 1522 aa21.39■■□□□ 1.01
RCCD1-209ENST00000557750 ABCC8Q09428 1581 aa21.38■■□□□ 1.01
RCCD1-209ENST00000557750 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
RCCD1-209ENST00000557750 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
RCCD1-209ENST00000557750 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 17e-8■■■■■ 70.8
RCCD1-209ENST00000557750 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
RCCD1-209ENST00000557750 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
RCCD1-209ENST00000557750 CHD1O14646 1710 aa21.24■□□□□ 0.99
RCCD1-209ENST00000557750 POLA1P09884 1462 aaPredicted RBP21.23■□□□□ 0.99
RCCD1-209ENST00000557750 FBLN2P98095 1184 aa21.23■□□□□ 0.99
RCCD1-209ENST00000557750 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
RCCD1-209ENST00000557750 ARAP1Q96P48 1450 aa21.17■□□□□ 0.98
RCCD1-209ENST00000557750 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
RCCD1-209ENST00000557750 SOGA1O94964 1423 aa21.15■□□□□ 0.98
RCCD1-209ENST00000557750 TRHP20396 242 aaPredicted RBP21.12■□□□□ 0.97
RCCD1-209ENST00000557750 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
RCCD1-209ENST00000557750 FGD5Q6ZNL6 1462 aa21.06■□□□□ 0.96
RCCD1-209ENST00000557750 CHMP7Q8WUX9 453 aaPredicted RBP21.03■□□□□ 0.96
RCCD1-209ENST00000557750 CUX1P39880 1505 aa21.03■□□□□ 0.96
RCCD1-209ENST00000557750 WRNQ14191 1432 aaPredicted RBP eCLIP21.02■□□□□ 0.96
RCCD1-209ENST00000557750 WDR97A6NE52 1622 aa21.01■□□□□ 0.95
RCCD1-209ENST00000557750 CLASP1Q7Z460 1538 aa21.01■□□□□ 0.95
RCCD1-209ENST00000557750 MAGI1Q96QZ7 1491 aaPredicted RBP20.98■□□□□ 0.95
RCCD1-209ENST00000557750 GRIN2BQ13224 1484 aa20.98■□□□□ 0.95
RCCD1-209ENST00000557750 SYNJ1O43426 1573 aa20.96■□□□□ 0.95
RCCD1-209ENST00000557750 SYNJ2O15056 1496 aa20.93■□□□□ 0.94
RCCD1-209ENST00000557750 TOP2BQ02880 1626 aa20.9■□□□□ 0.94
RCCD1-209ENST00000557750 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
RCCD1-209ENST00000557750 BIVM-ERCC5R4GMW8 1640 aa20.86■□□□□ 0.93
RCCD1-209ENST00000557750 PBRM1Q86U86 1689 aa20.83■□□□□ 0.93
RCCD1-209ENST00000557750 ABCA10Q8WWZ4 1543 aa20.8■□□□□ 0.92
RCCD1-209ENST00000557750 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
RCCD1-209ENST00000557750 GRIN2AQ12879 1464 aa20.7■□□□□ 0.9
RCCD1-209ENST00000557750 ERCC6L2Q5T890 1561 aa20.7■□□□□ 0.9
RCCD1-209ENST00000557750 AEBP2Q6ZN18 517 aaPredicted RBP20.67■□□□□ 0.9
RCCD1-209ENST00000557750 CHIC1Q5VXU3 224 aa20.64■□□□□ 0.9
RCCD1-209ENST00000557750 NUP160Q12769 1436 aa20.64■□□□□ 0.9
RCCD1-209ENST00000557750 ADAMTS12P58397 1594 aa20.64■□□□□ 0.9
RCCD1-209ENST00000557750 CEP170Q5SW79 1584 aa20.64■□□□□ 0.89
RCCD1-209ENST00000557750 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
RCCD1-209ENST00000557750 KIF27Q86VH2 1401 aa20.57■□□□□ 0.88
RCCD1-209ENST00000557750 SHROOM2Q13796 1616 aa20.56■□□□□ 0.88
RCCD1-209ENST00000557750 ERICH3Q5RHP9 1530 aa20.52■□□□□ 0.88
RCCD1-209ENST00000557750 PRG4Q92954 1404 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms