RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 JPH4Q96JJ6 628 aa33■■■□□ 2.87
ABCD4-228ENST00000557588 MAPKBP1O60336 1514 aa32.98■■■□□ 2.87
ABCD4-228ENST00000557588 ABCC10Q5T3U5 1492 aa32.98■■■□□ 2.87
ABCD4-228ENST00000557588 DIP2BQ9P265 1576 aa32.92■■■□□ 2.86
ABCD4-228ENST00000557588 ADCY10Q96PN6 1610 aa32.91■■■□□ 2.86
ABCD4-228ENST00000557588 FAM69CQ0P6D2 419 aa32.83■■■□□ 2.85
ABCD4-228ENST00000557588 KIAA0586Q9BVV6 1533 aa32.79■■■□□ 2.84
ABCD4-228ENST00000557588 NPM1P06748 294 aaKnown RBP eCLIP32.79■■■□□ 2.84
ABCD4-228ENST00000557588 CUL7Q14999 1698 aa32.76■■■□□ 2.84
ABCD4-228ENST00000557588 KDM6BO15054 1643 aa32.73■■■□□ 2.83
ABCD4-228ENST00000557588 IGF1RP08069 1367 aa32.67■■■□□ 2.82
ABCD4-228ENST00000557588 KIF27Q86VH2 1401 aa32.65■■■□□ 2.82
ABCD4-228ENST00000557588 TSPOAP1O95153 1857 aa32.61■■■□□ 2.81
ABCD4-228ENST00000557588 PTPRGP23470 1445 aa32.52■■■□□ 2.8
ABCD4-228ENST00000557588 KDM4FA0A1W2PPD8 638 aa32.52■■■□□ 2.8
ABCD4-228ENST00000557588 ABCC2Q92887 1545 aa32.51■■■□□ 2.79
ABCD4-228ENST00000557588 TNIKQ9UKE5 1360 aa32.45■■■□□ 2.79
ABCD4-228ENST00000557588 GLI2P10070 1586 aa32.45■■■□□ 2.79
ABCD4-228ENST00000557588 CARMIL2Q6F5E8 1435 aa32.45■■■□□ 2.79
ABCD4-228ENST00000557588 PPRC1Q5VV67 1664 aaKnown RBP32.44■■■□□ 2.78
ABCD4-228ENST00000557588 IQGAP2Q13576 1575 aa32.44■■■□□ 2.78
ABCD4-228ENST00000557588 CARMIL1Q5VZK9 1371 aa32.43■■■□□ 2.78
ABCD4-228ENST00000557588 UHRF1BP1LA0JNW5 1464 aa32.41■■■□□ 2.78
ABCD4-228ENST00000557588 PLB1Q6P1J6 1458 aa32.41■■■□□ 2.78
ABCD4-228ENST00000557588 ASXL2Q76L83 1435 aa32.4■■■□□ 2.78
ABCD4-228ENST00000557588 DISP1Q96F81 1524 aa32.31■■■□□ 2.76
ABCD4-228ENST00000557588 TTBK1Q5TCY1 1321 aaPredicted RBP32.3■■■□□ 2.76
ABCD4-228ENST00000557588 UACAQ9BZF9 1416 aa32.3■■■□□ 2.76
ABCD4-228ENST00000557588 MAP3K4Q9Y6R4 1608 aa32.27■■■□□ 2.76
ABCD4-228ENST00000557588 KDM5BQ9UGL1 1544 aa32.26■■■□□ 2.75
ABCD4-228ENST00000557588 ADGRL1O94910 1474 aa32.23■■■□□ 2.75
ABCD4-228ENST00000557588 EPRSP07814 1512 aaKnown RBP32.23■■■□□ 2.75
ABCD4-228ENST00000557588 UGGT2Q9NYU1 1516 aa32.23■■■□□ 2.75
ABCD4-228ENST00000557588 ZCCHC11Q5TAX3 1644 aaKnown RBP32.19■■■□□ 2.74
ABCD4-228ENST00000557588 KIAA0556O60303 1618 aa32.18■■■□□ 2.74
ABCD4-228ENST00000557588 COL17A1Q9UMD9 1497 aaPredicted RBP32.17■■■□□ 2.74
ABCD4-228ENST00000557588 TEX14Q8IWB6 1497 aa32.16■■■□□ 2.74
ABCD4-228ENST00000557588 RAPGEF2Q9Y4G8 1499 aa32.13■■■□□ 2.73
ABCD4-228ENST00000557588 WDR7Q9Y4E6 1490 aa32.04■■■□□ 2.72
ABCD4-228ENST00000557588 ILDR1Q86SU0 546 aaPredicted RBP32.01■■■□□ 2.71
ABCD4-228ENST00000557588 CTTNBP2Q8WZ74 1663 aa31.99■■■□□ 2.71
ABCD4-228ENST00000557588 HECW2Q9P2P5 1572 aa31.98■■■□□ 2.71
ABCD4-228ENST00000557588 CFAP43Q8NDM7 1665 aa31.93■■■□□ 2.7
ABCD4-228ENST00000557588 MAGI3Q5TCQ9 1506 aa31.91■■■□□ 2.7
ABCD4-228ENST00000557588 ABCA8O94911 1581 aa31.9■■■□□ 2.7
ABCD4-228ENST00000557588 GOLGA3Q08378 1498 aa31.89■■■□□ 2.7
ABCD4-228ENST00000557588 CD109Q6YHK3 1445 aa31.83■■■□□ 2.69
ABCD4-228ENST00000557588 KIF21BO75037 1637 aa31.72■■■□□ 2.67
ABCD4-228ENST00000557588 PRXQ9BXM0 1461 aa31.71■■■□□ 2.67
ABCD4-228ENST00000557588 ARAP3Q8WWN8 1544 aa31.68■■■□□ 2.66
ABCD4-228ENST00000557588 KCNH8Q96L42 1107 aa31.67■■■□□ 2.66
ABCD4-228ENST00000557588 ABCA9Q8IUA7 1624 aa31.6■■■□□ 2.65
ABCD4-228ENST00000557588 ATP10BO94823 1461 aa31.56■■■□□ 2.64
ABCD4-228ENST00000557588 PHLDB1Q86UU1 1377 aa31.52■■■□□ 2.64
ABCD4-228ENST00000557588 ADAMTSL3P82987 1691 aa31.51■■■□□ 2.64
ABCD4-228ENST00000557588 SAMD9Q5K651 1589 aa31.51■■■□□ 2.63
ABCD4-228ENST00000557588 NEO1Q92859 1461 aa31.46■■■□□ 2.63
ABCD4-228ENST00000557588 RAPGEF6Q8TEU7 1601 aa31.45■■■□□ 2.62
ABCD4-228ENST00000557588 PTPRMP28827 1452 aa31.45■■■□□ 2.62
ABCD4-228ENST00000557588 FRMPD1Q5SYB0 1578 aa31.43■■■□□ 2.62
ABCD4-228ENST00000557588 ARID3CA6NKF2 412 aa31.43■■■□□ 2.62
ABCD4-228ENST00000557588 FAM9AQ8IZU1 332 aaPredicted RBP31.43■■■□□ 2.62
ABCD4-228ENST00000557588 BCORL1Q5H9F3 1711 aa31.38■■■□□ 2.61
ABCD4-228ENST00000557588 P3H3Q8IVL6 736 aa31.37■■■□□ 2.61
ABCD4-228ENST00000557588 RAPGEF3O95398 923 aa31.34■■■□□ 2.61
ABCD4-228ENST00000557588 MADDQ8WXG6 1647 aa31.33■■■□□ 2.61
ABCD4-228ENST00000557588 NUP153P49790 1475 aaKnown RBP31.32■■■□□ 2.6
ABCD4-228ENST00000557588 ARHGEF40Q8TER5 1519 aa31.31■■■□□ 2.6
ABCD4-228ENST00000557588 FBXO41Q8TF61 875 aa31.31■■■□□ 2.6
ABCD4-228ENST00000557588 PCF11O94913 1555 aaKnown RBP31.3■■■□□ 2.6
ABCD4-228ENST00000557588 RICTORQ6R327 1708 aa31.26■■■□□ 2.59
ABCD4-228ENST00000557588 LMTK3Q96Q04 1460 aa31.25■■■□□ 2.59
ABCD4-228ENST00000557588 CFAP74Q9C0B2 1584 aa31.22■■■□□ 2.59
ABCD4-228ENST00000557588 CSRNP3Q8WYN3 585 aa31.19■■■□□ 2.58
ABCD4-228ENST00000557588 DENND4BO75064 1496 aaPredicted RBP31.19■■■□□ 2.58
ABCD4-228ENST00000557588 RIMS1Q86UR5 1692 aaKnown RBP31.19■■■□□ 2.58
ABCD4-228ENST00000557588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.18■■■□□ 2.58
ABCD4-228ENST00000557588 HNRNPUL2Q1KMD3 747 aaKnown RBP31.18■■■□□ 2.58
ABCD4-228ENST00000557588 ZMYM4Q5VZL5 1548 aa31.17■■■□□ 2.58
ABCD4-228ENST00000557588 ARID4BQ4LE39 1312 aaPredicted RBP31.17■■■□□ 2.58
ABCD4-228ENST00000557588 FHOD3Q2V2M9 1422 aa31.16■■■□□ 2.58
ABCD4-228ENST00000557588 FANCAO15360 1455 aa31.14■■■□□ 2.57
ABCD4-228ENST00000557588 AKNAQ7Z591 1439 aa31.13■■■□□ 2.57
ABCD4-228ENST00000557588 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.13■■■□□ 2.57
ABCD4-228ENST00000557588 TTC37Q6PGP7 1564 aa31.12■■■□□ 2.57
ABCD4-228ENST00000557588 EEA1Q15075 1411 aa31.1■■■□□ 2.57
ABCD4-228ENST00000557588 EFCAB5A4FU69 1503 aa31.08■■■□□ 2.57
ABCD4-228ENST00000557588 SIGLEC1Q9BZZ2 1709 aa31.07■■■□□ 2.56
ABCD4-228ENST00000557588 ZFYVE16Q7Z3T8 1539 aa31.07■■■□□ 2.56
ABCD4-228ENST00000557588 PLEKHD1A6NEE1 506 aa31.06■■■□□ 2.56
ABCD4-228ENST00000557588 POGZQ7Z3K3 1410 aa31.05■■■□□ 2.56
ABCD4-228ENST00000557588 MAGI2Q86UL8 1455 aa31.03■■■□□ 2.56
ABCD4-228ENST00000557588 YEATS2Q9ULM3 1422 aa31■■■□□ 2.55
ABCD4-228ENST00000557588 HECW1Q76N89 1606 aa30.98■■■□□ 2.55
ABCD4-228ENST00000557588 FER1L4A9Z1Z3 1794 aa30.97■■■□□ 2.55
ABCD4-228ENST00000557588 RANGAP1P46060 587 aaPredicted RBP30.96■■■□□ 2.55
ABCD4-228ENST00000557588 CDK13Q14004 1512 aaKnown RBP30.94■■■□□ 2.54
ABCD4-228ENST00000557588 HSPA2P54652 639 aa30.91■■■□□ 2.54
ABCD4-228ENST00000557588 PLCH2O75038 1416 aa30.89■■■□□ 2.53
ABCD4-228ENST00000557588 ARHGEF12Q9NZN5 1544 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms