RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, human

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF1A-211	ENST00000557446	KIAA0586	Q9BVV6	1533 aa		33.35	■■■□□ 2.93
HIF1A-211	ENST00000557446	RAPGEF2	Q9Y4G8	1499 aa		33.35	■■■□□ 2.93
HIF1A-211	ENST00000557446	JPH4	Q96JJ6	628 aa		33.29	■■■□□ 2.92
HIF1A-211	ENST00000557446	PRG4	Q92954	1404 aa	Predicted RBP	33.28	■■■□□ 2.92
HIF1A-211	ENST00000557446	CHIC1	Q5VXU3	224 aa		33.24	■■■□□ 2.91
HIF1A-211	ENST00000557446	IQGAP2	Q13576	1575 aa		33.21	■■■□□ 2.91
HIF1A-211	ENST00000557446	PRX	Q9BXM0	1461 aa		33.21	■■■□□ 2.91
HIF1A-211	ENST00000557446	EEA1	Q15075	1411 aa		33.19	■■■□□ 2.9
HIF1A-211	ENST00000557446	CTTNBP2	Q8WZ74	1663 aa		33.16	■■■□□ 2.9
HIF1A-211	ENST00000557446	CSRNP3	Q8WYN3	585 aa		33.1	■■■□□ 2.89
HIF1A-211	ENST00000557446	FAM9A	Q8IZU1	332 aa	Predicted RBP	33	■■■□□ 2.87
HIF1A-211	ENST00000557446	UGGT2	Q9NYU1	1516 aa		33	■■■□□ 2.87
HIF1A-211	ENST00000557446	CARMIL2	Q6F5E8	1435 aa		32.99	■■■□□ 2.87
HIF1A-211	ENST00000557446	DISP1	Q96F81	1524 aa		32.94	■■■□□ 2.86
HIF1A-211	ENST00000557446	KIAA0556	O60303	1618 aa		32.92	■■■□□ 2.86
HIF1A-211	ENST00000557446	KIF21B	O75037	1637 aa		32.92	■■■□□ 2.86
HIF1A-211	ENST00000557446	TNIK	Q9UKE5	1360 aa		32.88	■■■□□ 2.85
HIF1A-211	ENST00000557446	ADCY10	Q96PN6	1610 aa		32.86	■■■□□ 2.85
HIF1A-211	ENST00000557446	PTPRG	P23470	1445 aa		32.85	■■■□□ 2.85
HIF1A-211	ENST00000557446	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.8	■■■□□ 2.84
HIF1A-211	ENST00000557446	GOLGA3	Q08378	1498 aa		32.8	■■■□□ 2.84
HIF1A-211	ENST00000557446	TRH	P20396	242 aa	Predicted RBP	32.78	■■■□□ 2.84
HIF1A-211	ENST00000557446	SAMD9	Q5K651	1589 aa		32.67	■■■□□ 2.82
HIF1A-211	ENST00000557446	UACA	Q9BZF9	1416 aa		32.66	■■■□□ 2.82
HIF1A-211	ENST00000557446	NPM1	P06748	294 aa	Known RBP eCLIP	32.65	■■■□□ 2.82
HIF1A-211	ENST00000557446	ABCC2	Q92887	1545 aa		32.65	■■■□□ 2.82
HIF1A-211	ENST00000557446	UHRF1BP1L	A0JNW5	1464 aa		32.64	■■■□□ 2.82
HIF1A-211	ENST00000557446	MAPKBP1	O60336	1514 aa		32.64	■■■□□ 2.82
HIF1A-211	ENST00000557446	EHMT2	Q96KQ7	1210 aa		32.6	■■■□□ 2.81
HIF1A-211	ENST00000557446	KIF13A	Q9H1H9	1805 aa		32.56	■■■□□ 2.8
HIF1A-211	ENST00000557446	PLB1	Q6P1J6	1458 aa		32.54	■■■□□ 2.8
HIF1A-211	ENST00000557446	ABCA8	O94911	1581 aa		32.53	■■■□□ 2.8
HIF1A-211	ENST00000557446	P3H3	Q8IVL6	736 aa		32.53	■■■□□ 2.8
HIF1A-211	ENST00000557446	UBTF	P17480	764 aa	Known RBP	32.52	■■■□□ 2.8
HIF1A-211	ENST00000557446	RANGAP1	P46060	587 aa	Predicted RBP	32.52	■■■□□ 2.8
HIF1A-211	ENST00000557446	EFCAB5	A4FU69	1503 aa		32.5	■■■□□ 2.79
HIF1A-211	ENST00000557446	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.49	■■■□□ 2.79
HIF1A-211	ENST00000557446	KDM5B	Q9UGL1	1544 aa		32.49	■■■□□ 2.79
HIF1A-211	ENST00000557446	DIP2B	Q9P265	1576 aa		32.48	■■■□□ 2.79
HIF1A-211	ENST00000557446	ABCC10	Q5T3U5	1492 aa		32.47	■■■□□ 2.79
HIF1A-211	ENST00000557446	FHOD3	Q2V2M9	1422 aa		32.43	■■■□□ 2.78
HIF1A-211	ENST00000557446	ASXL2	Q76L83	1435 aa		32.41	■■■□□ 2.78
HIF1A-211	ENST00000557446	RAPGEF6	Q8TEU7	1601 aa		32.38	■■■□□ 2.77
HIF1A-211	ENST00000557446	FAM69C	Q0P6D2	419 aa		32.35	■■■□□ 2.77
HIF1A-211	ENST00000557446	ARHGAP35	Q9NRY4	1499 aa		32.29	■■■□□ 2.76
HIF1A-211	ENST00000557446	WDR7	Q9Y4E6	1490 aa		32.25	■■■□□ 2.75
HIF1A-211	ENST00000557446	GLI2	P10070	1586 aa		32.24	■■■□□ 2.75
HIF1A-211	ENST00000557446	TSPOAP1	O95153	1857 aa		32.23	■■■□□ 2.75
HIF1A-211	ENST00000557446	EPRS	P07814	1512 aa	Known RBP	32.23	■■■□□ 2.75
HIF1A-211	ENST00000557446	ATP10B	O94823	1461 aa		32.22	■■■□□ 2.75
HIF1A-211	ENST00000557446	ARID3C	A6NKF2	412 aa		32.21	■■■□□ 2.75
HIF1A-211	ENST00000557446	NUP153	P49790	1475 aa	Known RBP	32.21	■■■□□ 2.75
HIF1A-211	ENST00000557446	FMN1	Q68DA7	1419 aa		32.15	■■■□□ 2.74
HIF1A-211	ENST00000557446	MAP3K4	Q9Y6R4	1608 aa		32.15	■■■□□ 2.74
HIF1A-211	ENST00000557446	PPRC1	Q5VV67	1664 aa	Known RBP	32.11	■■■□□ 2.73
HIF1A-211	ENST00000557446	HECW1	Q76N89	1606 aa		32.08	■■■□□ 2.73
HIF1A-211	ENST00000557446	CLIP1	P30622	1438 aa		32.07	■■■□□ 2.72
HIF1A-211	ENST00000557446	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.05	■■■□□ 2.72
HIF1A-211	ENST00000557446	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.05	■■■□□ 2.72
HIF1A-211	ENST00000557446	CFAP43	Q8NDM7	1665 aa		32.05	■■■□□ 2.72
HIF1A-211	ENST00000557446	KCNH8	Q96L42	1107 aa		32.01	■■■□□ 2.71
HIF1A-211	ENST00000557446	CDK13	Q14004	1512 aa	Known RBP	32	■■■□□ 2.71
HIF1A-211	ENST00000557446	KDM6B	O15054	1643 aa		31.99	■■■□□ 2.71
HIF1A-211	ENST00000557446	PCF11	O94913	1555 aa	Known RBP	31.98	■■■□□ 2.71
HIF1A-211	ENST00000557446	TEX14	Q8IWB6	1497 aa		31.95	■■■□□ 2.7
HIF1A-211	ENST00000557446	LRRIQ1	Q96JM4	1722 aa		31.95	■■■□□ 2.7
HIF1A-211	ENST00000557446	ABCA9	Q8IUA7	1624 aa		31.94	■■■□□ 2.7
HIF1A-211	ENST00000557446	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.94	■■■□□ 2.7
HIF1A-211	ENST00000557446	CD109	Q6YHK3	1445 aa		31.92	■■■□□ 2.7
HIF1A-211	ENST00000557446	CEP162	Q5TB80	1403 aa		31.92	■■■□□ 2.7
HIF1A-211	ENST00000557446	CASKIN1	Q8WXD9	1431 aa		31.89	■■■□□ 2.7
HIF1A-211	ENST00000557446	MAGI3	Q5TCQ9	1506 aa		31.89	■■■□□ 2.7
HIF1A-211	ENST00000557446	LOC105371045	A0A1W2PR82	267 aa		31.87	■■■□□ 2.69
HIF1A-211	ENST00000557446	PLEKHD1	A6NEE1	506 aa		31.87	■■■□□ 2.69
HIF1A-211	ENST00000557446	FYCO1	Q9BQS8	1478 aa		31.84	■■■□□ 2.69
HIF1A-211	ENST00000557446	CCDC18	Q5T9S5	1454 aa		31.81	■■■□□ 2.68
HIF1A-211	ENST00000557446	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.77	■■■□□ 2.68
HIF1A-211	ENST00000557446	TTC37	Q6PGP7	1564 aa		31.77	■■■□□ 2.68
HIF1A-211	ENST00000557446	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.73	■■■□□ 2.67
HIF1A-211	ENST00000557446	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.72	■■■□□ 2.67
HIF1A-211	ENST00000557446	KIF14	Q15058	1648 aa		31.71	■■■□□ 2.67
HIF1A-211	ENST00000557446	TRO	Q12816	1431 aa	Predicted RBP	31.71	■■■□□ 2.67
HIF1A-211	ENST00000557446	NEO1	Q92859	1461 aa		31.64	■■■□□ 2.66
HIF1A-211	ENST00000557446	MYO5C	Q9NQX4	1742 aa		31.63	■■■□□ 2.65
HIF1A-211	ENST00000557446	CFAP74	Q9C0B2	1584 aa		31.63	■■■□□ 2.65
HIF1A-211	ENST00000557446	ARAP3	Q8WWN8	1544 aa		31.6	■■■□□ 2.65
HIF1A-211	ENST00000557446	PHLDB1	Q86UU1	1377 aa		31.59	■■■□□ 2.65
HIF1A-211	ENST00000557446	FANCA	O15360	1455 aa		31.58	■■■□□ 2.65
HIF1A-211	ENST00000557446	VPS8	Q8N3P4	1428 aa		31.54	■■■□□ 2.64
HIF1A-211	ENST00000557446	PLCH2	O75038	1416 aa		31.53	■■■□□ 2.64
HIF1A-211	ENST00000557446	AKNA	Q7Z591	1439 aa		31.49	■■■□□ 2.63
HIF1A-211	ENST00000557446	FRMPD1	Q5SYB0	1578 aa		31.47	■■■□□ 2.63
HIF1A-211	ENST00000557446	PREX2	Q70Z35	1606 aa		31.47	■■■□□ 2.63
HIF1A-211	ENST00000557446	ARHGAP5	Q13017	1502 aa		31.45	■■■□□ 2.63
HIF1A-211	ENST00000557446	CDC42BPB	Q9Y5S2	1711 aa		31.45	■■■□□ 2.63
HIF1A-211	ENST00000557446	EHBP1L1	Q8N3D4	1523 aa		31.44	■■■□□ 2.62
HIF1A-211	ENST00000557446	MTUS2	Q5JR59	1369 aa		31.44	■■■□□ 2.62
HIF1A-211	ENST00000557446	CDC42BPA	Q5VT25	1732 aa		31.44	■■■□□ 2.62
HIF1A-211	ENST00000557446	RICTOR	Q6R327	1708 aa		31.44	■■■□□ 2.62
HIF1A-211	ENST00000557446	DENND4B	O75064	1496 aa	Predicted RBP	31.41	■■■□□ 2.62

Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms