RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 KIAA0586Q9BVV6 1533 aa33.35■■■□□ 2.93
HIF1A-211ENST00000557446 RAPGEF2Q9Y4G8 1499 aa33.35■■■□□ 2.93
HIF1A-211ENST00000557446 JPH4Q96JJ6 628 aa33.29■■■□□ 2.92
HIF1A-211ENST00000557446 PRG4Q92954 1404 aaPredicted RBP33.28■■■□□ 2.92
HIF1A-211ENST00000557446 CHIC1Q5VXU3 224 aa33.24■■■□□ 2.91
HIF1A-211ENST00000557446 IQGAP2Q13576 1575 aa33.21■■■□□ 2.91
HIF1A-211ENST00000557446 PRXQ9BXM0 1461 aa33.21■■■□□ 2.91
HIF1A-211ENST00000557446 EEA1Q15075 1411 aa33.19■■■□□ 2.9
HIF1A-211ENST00000557446 CTTNBP2Q8WZ74 1663 aa33.16■■■□□ 2.9
HIF1A-211ENST00000557446 CSRNP3Q8WYN3 585 aa33.1■■■□□ 2.89
HIF1A-211ENST00000557446 FAM9AQ8IZU1 332 aaPredicted RBP33■■■□□ 2.87
HIF1A-211ENST00000557446 UGGT2Q9NYU1 1516 aa33■■■□□ 2.87
HIF1A-211ENST00000557446 CARMIL2Q6F5E8 1435 aa32.99■■■□□ 2.87
HIF1A-211ENST00000557446 DISP1Q96F81 1524 aa32.94■■■□□ 2.86
HIF1A-211ENST00000557446 KIAA0556O60303 1618 aa32.92■■■□□ 2.86
HIF1A-211ENST00000557446 KIF21BO75037 1637 aa32.92■■■□□ 2.86
HIF1A-211ENST00000557446 TNIKQ9UKE5 1360 aa32.88■■■□□ 2.85
HIF1A-211ENST00000557446 ADCY10Q96PN6 1610 aa32.86■■■□□ 2.85
HIF1A-211ENST00000557446 PTPRGP23470 1445 aa32.85■■■□□ 2.85
HIF1A-211ENST00000557446 TTBK1Q5TCY1 1321 aaPredicted RBP32.8■■■□□ 2.84
HIF1A-211ENST00000557446 GOLGA3Q08378 1498 aa32.8■■■□□ 2.84
HIF1A-211ENST00000557446 TRHP20396 242 aaPredicted RBP32.78■■■□□ 2.84
HIF1A-211ENST00000557446 SAMD9Q5K651 1589 aa32.67■■■□□ 2.82
HIF1A-211ENST00000557446 UACAQ9BZF9 1416 aa32.66■■■□□ 2.82
HIF1A-211ENST00000557446 NPM1P06748 294 aaKnown RBP eCLIP32.65■■■□□ 2.82
HIF1A-211ENST00000557446 ABCC2Q92887 1545 aa32.65■■■□□ 2.82
HIF1A-211ENST00000557446 UHRF1BP1LA0JNW5 1464 aa32.64■■■□□ 2.82
HIF1A-211ENST00000557446 MAPKBP1O60336 1514 aa32.64■■■□□ 2.82
HIF1A-211ENST00000557446 EHMT2Q96KQ7 1210 aa32.6■■■□□ 2.81
HIF1A-211ENST00000557446 KIF13AQ9H1H9 1805 aa32.56■■■□□ 2.8
HIF1A-211ENST00000557446 PLB1Q6P1J6 1458 aa32.54■■■□□ 2.8
HIF1A-211ENST00000557446 ABCA8O94911 1581 aa32.53■■■□□ 2.8
HIF1A-211ENST00000557446 P3H3Q8IVL6 736 aa32.53■■■□□ 2.8
HIF1A-211ENST00000557446 UBTFP17480 764 aaKnown RBP32.52■■■□□ 2.8
HIF1A-211ENST00000557446 RANGAP1P46060 587 aaPredicted RBP32.52■■■□□ 2.8
HIF1A-211ENST00000557446 EFCAB5A4FU69 1503 aa32.5■■■□□ 2.79
HIF1A-211ENST00000557446 ZCCHC11Q5TAX3 1644 aaKnown RBP32.49■■■□□ 2.79
HIF1A-211ENST00000557446 KDM5BQ9UGL1 1544 aa32.49■■■□□ 2.79
HIF1A-211ENST00000557446 DIP2BQ9P265 1576 aa32.48■■■□□ 2.79
HIF1A-211ENST00000557446 ABCC10Q5T3U5 1492 aa32.47■■■□□ 2.79
HIF1A-211ENST00000557446 FHOD3Q2V2M9 1422 aa32.43■■■□□ 2.78
HIF1A-211ENST00000557446 ASXL2Q76L83 1435 aa32.41■■■□□ 2.78
HIF1A-211ENST00000557446 RAPGEF6Q8TEU7 1601 aa32.38■■■□□ 2.77
HIF1A-211ENST00000557446 FAM69CQ0P6D2 419 aa32.35■■■□□ 2.77
HIF1A-211ENST00000557446 ARHGAP35Q9NRY4 1499 aa32.29■■■□□ 2.76
HIF1A-211ENST00000557446 WDR7Q9Y4E6 1490 aa32.25■■■□□ 2.75
HIF1A-211ENST00000557446 GLI2P10070 1586 aa32.24■■■□□ 2.75
HIF1A-211ENST00000557446 TSPOAP1O95153 1857 aa32.23■■■□□ 2.75
HIF1A-211ENST00000557446 EPRSP07814 1512 aaKnown RBP32.23■■■□□ 2.75
HIF1A-211ENST00000557446 ATP10BO94823 1461 aa32.22■■■□□ 2.75
HIF1A-211ENST00000557446 ARID3CA6NKF2 412 aa32.21■■■□□ 2.75
HIF1A-211ENST00000557446 NUP153P49790 1475 aaKnown RBP32.21■■■□□ 2.75
HIF1A-211ENST00000557446 FMN1Q68DA7 1419 aa32.15■■■□□ 2.74
HIF1A-211ENST00000557446 MAP3K4Q9Y6R4 1608 aa32.15■■■□□ 2.74
HIF1A-211ENST00000557446 PPRC1Q5VV67 1664 aaKnown RBP32.11■■■□□ 2.73
HIF1A-211ENST00000557446 HECW1Q76N89 1606 aa32.08■■■□□ 2.73
HIF1A-211ENST00000557446 CLIP1P30622 1438 aa32.07■■■□□ 2.72
HIF1A-211ENST00000557446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.05■■■□□ 2.72
HIF1A-211ENST00000557446 HNRNPUL2Q1KMD3 747 aaKnown RBP32.05■■■□□ 2.72
HIF1A-211ENST00000557446 CFAP43Q8NDM7 1665 aa32.05■■■□□ 2.72
HIF1A-211ENST00000557446 KCNH8Q96L42 1107 aa32.01■■■□□ 2.71
HIF1A-211ENST00000557446 CDK13Q14004 1512 aaKnown RBP32■■■□□ 2.71
HIF1A-211ENST00000557446 KDM6BO15054 1643 aa31.99■■■□□ 2.71
HIF1A-211ENST00000557446 PCF11O94913 1555 aaKnown RBP31.98■■■□□ 2.71
HIF1A-211ENST00000557446 TEX14Q8IWB6 1497 aa31.95■■■□□ 2.7
HIF1A-211ENST00000557446 LRRIQ1Q96JM4 1722 aa31.95■■■□□ 2.7
HIF1A-211ENST00000557446 ABCA9Q8IUA7 1624 aa31.94■■■□□ 2.7
HIF1A-211ENST00000557446 ATP1B4Q9UN42 357 aaPredicted RBP31.94■■■□□ 2.7
HIF1A-211ENST00000557446 CD109Q6YHK3 1445 aa31.92■■■□□ 2.7
HIF1A-211ENST00000557446 CEP162Q5TB80 1403 aa31.92■■■□□ 2.7
HIF1A-211ENST00000557446 CASKIN1Q8WXD9 1431 aa31.89■■■□□ 2.7
HIF1A-211ENST00000557446 MAGI3Q5TCQ9 1506 aa31.89■■■□□ 2.7
HIF1A-211ENST00000557446 LOC105371045A0A1W2PR82 267 aa31.87■■■□□ 2.69
HIF1A-211ENST00000557446 PLEKHD1A6NEE1 506 aa31.87■■■□□ 2.69
HIF1A-211ENST00000557446 FYCO1Q9BQS8 1478 aa31.84■■■□□ 2.69
HIF1A-211ENST00000557446 CCDC18Q5T9S5 1454 aa31.81■■■□□ 2.68
HIF1A-211ENST00000557446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.77■■■□□ 2.68
HIF1A-211ENST00000557446 TTC37Q6PGP7 1564 aa31.77■■■□□ 2.68
HIF1A-211ENST00000557446 CDK11AQ9UQ88 783 aaPredicted RBP31.73■■■□□ 2.67
HIF1A-211ENST00000557446 COL17A1Q9UMD9 1497 aaPredicted RBP31.72■■■□□ 2.67
HIF1A-211ENST00000557446 KIF14Q15058 1648 aa31.71■■■□□ 2.67
HIF1A-211ENST00000557446 TROQ12816 1431 aaPredicted RBP31.71■■■□□ 2.67
HIF1A-211ENST00000557446 NEO1Q92859 1461 aa31.64■■■□□ 2.66
HIF1A-211ENST00000557446 MYO5CQ9NQX4 1742 aa31.63■■■□□ 2.65
HIF1A-211ENST00000557446 CFAP74Q9C0B2 1584 aa31.63■■■□□ 2.65
HIF1A-211ENST00000557446 ARAP3Q8WWN8 1544 aa31.6■■■□□ 2.65
HIF1A-211ENST00000557446 PHLDB1Q86UU1 1377 aa31.59■■■□□ 2.65
HIF1A-211ENST00000557446 FANCAO15360 1455 aa31.58■■■□□ 2.65
HIF1A-211ENST00000557446 VPS8Q8N3P4 1428 aa31.54■■■□□ 2.64
HIF1A-211ENST00000557446 PLCH2O75038 1416 aa31.53■■■□□ 2.64
HIF1A-211ENST00000557446 AKNAQ7Z591 1439 aa31.49■■■□□ 2.63
HIF1A-211ENST00000557446 FRMPD1Q5SYB0 1578 aa31.47■■■□□ 2.63
HIF1A-211ENST00000557446 PREX2Q70Z35 1606 aa31.47■■■□□ 2.63
HIF1A-211ENST00000557446 ARHGAP5Q13017 1502 aa31.45■■■□□ 2.63
HIF1A-211ENST00000557446 CDC42BPBQ9Y5S2 1711 aa31.45■■■□□ 2.63
HIF1A-211ENST00000557446 EHBP1L1Q8N3D4 1523 aa31.44■■■□□ 2.62
HIF1A-211ENST00000557446 MTUS2Q5JR59 1369 aa31.44■■■□□ 2.62
HIF1A-211ENST00000557446 CDC42BPAQ5VT25 1732 aa31.44■■■□□ 2.62
HIF1A-211ENST00000557446 RICTORQ6R327 1708 aa31.44■■■□□ 2.62
HIF1A-211ENST00000557446 DENND4BO75064 1496 aaPredicted RBP31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms