RNA–Protein interactions for RNA: ENST00000557215.5

CLMN-208, Transcript of calmin, humanhuman

TSL 3

Gene CLMN, Length 515 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-208ENST00000557215 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
CLMN-208ENST00000557215 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
CLMN-208ENST00000557215 ZNF608Q9ULD9 1512 aaPredicted RBP16.3■□□□□ 0.2
CLMN-208ENST00000557215 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
CLMN-208ENST00000557215 KIF27Q86VH2 1401 aa16.29■□□□□ 0.2
CLMN-208ENST00000557215 RUSC2Q8N2Y8 1516 aa16.28■□□□□ 0.2
CLMN-208ENST00000557215 AQRO60306 1485 aaKnown RBP eCLIP16.27■□□□□ 0.19
CLMN-208ENST00000557215 RNF39Q9H2S5 420 aa16.26■□□□□ 0.19
CLMN-208ENST00000557215 GAPVD1Q14C86 1478 aa16.25■□□□□ 0.19
CLMN-208ENST00000557215 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
CLMN-208ENST00000557215 FAM9AQ8IZU1 332 aaPredicted RBP16.25■□□□□ 0.19
CLMN-208ENST00000557215 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
CLMN-208ENST00000557215 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
CLMN-208ENST00000557215 EEA1Q15075 1411 aa16.23■□□□□ 0.19
CLMN-208ENST00000557215 GRIN2BQ13224 1484 aa16.19■□□□□ 0.18
CLMN-208ENST00000557215 PBRM1Q86U86 1689 aa16.17■□□□□ 0.18
CLMN-208ENST00000557215 IGF1RP08069 1367 aa16.16■□□□□ 0.18
CLMN-208ENST00000557215 ERICH3Q5RHP9 1530 aa16.16■□□□□ 0.18
CLMN-208ENST00000557215 TRHP20396 242 aaPredicted RBP16.15■□□□□ 0.18
CLMN-208ENST00000557215 C1QBPQ07021 282 aaKnown RBP16.15■□□□□ 0.18
CLMN-208ENST00000557215 SNAPC4Q5SXM2 1469 aa16.13■□□□□ 0.17
CLMN-208ENST00000557215 SPINK5Q9NQ38 1064 aaPredicted RBP16.12■□□□□ 0.17
CLMN-208ENST00000557215 CAPN15O75808 1086 aa16.1■□□□□ 0.17
CLMN-208ENST00000557215 MAGI1Q96QZ7 1491 aaPredicted RBP16.1■□□□□ 0.17
CLMN-208ENST00000557215 CUL7Q14999 1698 aa16.09■□□□□ 0.17
CLMN-208ENST00000557215 CARMIL1Q5VZK9 1371 aa16.09■□□□□ 0.17
CLMN-208ENST00000557215 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
CLMN-208ENST00000557215 FHAD1B1AJZ9 1412 aa16.07■□□□□ 0.16
CLMN-208ENST00000557215 PRXQ9BXM0 1461 aa16.06■□□□□ 0.16
CLMN-208ENST00000557215 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
CLMN-208ENST00000557215 RAPGEF2Q9Y4G8 1499 aa16.03■□□□□ 0.16
CLMN-208ENST00000557215 KIF21BO75037 1637 aa16.03■□□□□ 0.16
CLMN-208ENST00000557215 FBLN2P98095 1184 aa16.02■□□□□ 0.16
CLMN-208ENST00000557215 CHMP7Q8WUX9 453 aaPredicted RBP16.02■□□□□ 0.16
CLMN-208ENST00000557215 POLA2Q14181 598 aa16■□□□□ 0.15
CLMN-208ENST00000557215 GOLGA3Q08378 1498 aa15.99■□□□□ 0.15
CLMN-208ENST00000557215 GRIN2AQ12879 1464 aa15.98■□□□□ 0.15
CLMN-208ENST00000557215 AMER1Q5JTC6 1135 aaPredicted RBP15.97■□□□□ 0.15
CLMN-208ENST00000557215 CHD1O14646 1710 aa15.95■□□□□ 0.14
CLMN-208ENST00000557215 LOC105371045A0A1W2PR82 267 aa15.95■□□□□ 0.14
CLMN-208ENST00000557215 UBTFP17480 764 aaKnown RBP15.93■□□□□ 0.14
CLMN-208ENST00000557215 MKRN4PQ13434 485 aaPredicted RBP15.91■□□□□ 0.14
CLMN-208ENST00000557215 SPDYE4A6NLX3 237 aa15.9■□□□□ 0.14
CLMN-208ENST00000557215 CEP170Q5SW79 1584 aa15.89■□□□□ 0.13
CLMN-208ENST00000557215 NUP160Q12769 1436 aa15.89■□□□□ 0.13
CLMN-208ENST00000557215 RTN4Q9NQC3 1192 aaKnown RBP15.86■□□□□ 0.13
CLMN-208ENST00000557215 ZBTB12Q9Y330 459 aaPredicted RBP15.85■□□□□ 0.13
CLMN-208ENST00000557215 TNIKQ9UKE5 1360 aa15.85■□□□□ 0.13
CLMN-208ENST00000557215 KIAA0586Q9BVV6 1533 aa15.84■□□□□ 0.13
CLMN-208ENST00000557215 CTTNBP2Q8WZ74 1663 aa15.83■□□□□ 0.13
CLMN-208ENST00000557215 OSCARQ8IYS5 282 aa15.83■□□□□ 0.12
CLMN-208ENST00000557215 IQGAP2Q13576 1575 aa15.81■□□□□ 0.12
CLMN-208ENST00000557215 ABCB7O75027 752 aa15.8■□□□□ 0.12
CLMN-208ENST00000557215 RANGAP1P46060 587 aaPredicted RBP15.8■□□□□ 0.12
CLMN-208ENST00000557215 CLASP1Q7Z460 1538 aa15.79■□□□□ 0.12
CLMN-208ENST00000557215 FBXO3Q9UK99 471 aa15.77■□□□□ 0.12
CLMN-208ENST00000557215 CEP162Q5TB80 1403 aa15.74■□□□□ 0.11
CLMN-208ENST00000557215 JPH4Q96JJ6 628 aa15.73■□□□□ 0.11
CLMN-208ENST00000557215 UGGT2Q9NYU1 1516 aa15.73■□□□□ 0.11
CLMN-208ENST00000557215 CLIP1P30622 1438 aa15.72■□□□□ 0.11
CLMN-208ENST00000557215 SHROOM2Q13796 1616 aa15.7■□□□□ 0.1
CLMN-208ENST00000557215 PRG4Q92954 1404 aaPredicted RBP15.68■□□□□ 0.1
CLMN-208ENST00000557215 EFCAB5A4FU69 1503 aa15.68■□□□□ 0.1
CLMN-208ENST00000557215 ARHGAP35Q9NRY4 1499 aa15.67■□□□□ 0.1
CLMN-208ENST00000557215 P3H3Q8IVL6 736 aa15.67■□□□□ 0.1
CLMN-208ENST00000557215 DISP1Q96F81 1524 aa15.67■□□□□ 0.1
CLMN-208ENST00000557215 SAMD9Q5K651 1589 aa15.66■□□□□ 0.1
CLMN-208ENST00000557215 DSG3P32926 999 aa15.66■□□□□ 0.1
CLMN-208ENST00000557215 CARMIL2Q6F5E8 1435 aa15.66■□□□□ 0.1
CLMN-208ENST00000557215 KIAA0556O60303 1618 aa15.65■□□□□ 0.1
CLMN-208ENST00000557215 PROM2Q8N271 834 aa15.65■□□□□ 0.1
CLMN-208ENST00000557215 ERCC6L2Q5T890 1561 aa15.63■□□□□ 0.09
CLMN-208ENST00000557215 FHOD3Q2V2M9 1422 aa15.63■□□□□ 0.09
CLMN-208ENST00000557215 ARAP1Q96P48 1450 aa15.61■□□□□ 0.09
CLMN-208ENST00000557215 TTBK1Q5TCY1 1321 aaPredicted RBP15.59■□□□□ 0.09
CLMN-208ENST00000557215 ARHGEF11O15085 1522 aa15.57■□□□□ 0.08
CLMN-208ENST00000557215 PTPRGP23470 1445 aa15.54■□□□□ 0.08
CLMN-208ENST00000557215 FMN1Q68DA7 1419 aa15.53■□□□□ 0.08
CLMN-208ENST00000557215 RIMBP3CA6NJZ7 1639 aa15.52■□□□□ 0.08
CLMN-208ENST00000557215 RIMBP3BA6NNM3 1639 aa15.52■□□□□ 0.08
CLMN-208ENST00000557215 RIMBP3Q9UFD9 1639 aa15.52■□□□□ 0.08
CLMN-208ENST00000557215 VPS8Q8N3P4 1428 aa15.51■□□□□ 0.07
CLMN-208ENST00000557215 PLB1Q6P1J6 1458 aa15.48■□□□□ 0.07
CLMN-208ENST00000557215 CACNB1Q02641 598 aaPredicted RBP15.48■□□□□ 0.07
CLMN-208ENST00000557215 PCF11O94913 1555 aaKnown RBP15.47■□□□□ 0.07
CLMN-208ENST00000557215 VASPP50552 380 aaPredicted RBP15.46■□□□□ 0.07
CLMN-208ENST00000557215 DNAJC5Q9H3Z4 198 aa15.46■□□□□ 0.07
CLMN-208ENST00000557215 ATP1B4Q9UN42 357 aaPredicted RBP15.46■□□□□ 0.07
CLMN-208ENST00000557215 CASKIN1Q8WXD9 1431 aa15.45■□□□□ 0.06
CLMN-208ENST00000557215 UACAQ9BZF9 1416 aa15.45■□□□□ 0.06
CLMN-208ENST00000557215 ZNF692Q9BU19 519 aaPredicted RBP15.45■□□□□ 0.06
CLMN-208ENST00000557215 ABCA8O94911 1581 aa15.45■□□□□ 0.06
CLMN-208ENST00000557215 RAPGEF6Q8TEU7 1601 aa15.44■□□□□ 0.06
CLMN-208ENST00000557215 FYCO1Q9BQS8 1478 aa15.44■□□□□ 0.06
CLMN-208ENST00000557215 HECW1Q76N89 1606 aa15.43■□□□□ 0.06
CLMN-208ENST00000557215 SPDYE2BA6NHP3 402 aa15.42■□□□□ 0.06
CLMN-208ENST00000557215 SPDYE6P0CI01 402 aa15.42■□□□□ 0.06
CLMN-208ENST00000557215 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
CLMN-208ENST00000557215 CYB5RLQ6IPT4 315 aa15.42■□□□□ 0.06
CLMN-208ENST00000557215 ABCC2Q92887 1545 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms