RNA–Protein interactions for RNA: ENST00000557215.5

CLMN-208, Transcript of calmin, humanhuman

TSL 3

Gene CLMN, Length 515 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-208ENST00000557215 AEBP2Q6ZN18 517 aaPredicted RBP26.44■■□□□ 1.82
CLMN-208ENST00000557215 CHIC1Q5VXU3 224 aa26.42■■□□□ 1.82
CLMN-208ENST00000557215 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
CLMN-208ENST00000557215 NISCHQ9Y2I1 1504 aa22.99■■□□□ 1.27
CLMN-208ENST00000557215 SENP3Q9H4L4 574 aaPredicted RBP22.47■■□□□ 1.19
CLMN-208ENST00000557215 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
CLMN-208ENST00000557215 FOXD1Q16676 465 aa20.71■□□□□ 0.91
CLMN-208ENST00000557215 ADRA2BP18089 450 aa20.37■□□□□ 0.85
CLMN-208ENST00000557215 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
CLMN-208ENST00000557215 CCDC180Q9P1Z9 1646 aa20.24■□□□□ 0.83
CLMN-208ENST00000557215 PIAS4Q8N2W9 510 aaPredicted RBP19.72■□□□□ 0.75
CLMN-208ENST00000557215 ABCC9O60706 1549 aa19.5■□□□□ 0.71
CLMN-208ENST00000557215 KCNA4P22459 653 aa19.34■□□□□ 0.69
CLMN-208ENST00000557215 ZCCHC6Q5VYS8 1495 aaKnown RBP19.25■□□□□ 0.67
CLMN-208ENST00000557215 PPP4R3CPQ6ZMV5 832 aa19.2■□□□□ 0.66
CLMN-208ENST00000557215 DCAF8L2P0C7V8 631 aa19.12■□□□□ 0.65
CLMN-208ENST00000557215 DCAF1Q9Y4B6 1507 aa19.02■□□□□ 0.64
CLMN-208ENST00000557215 MSH5O43196 834 aa18.97■□□□□ 0.63
CLMN-208ENST00000557215 NACADO15069 1562 aa18.95■□□□□ 0.62
CLMN-208ENST00000557215 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
CLMN-208ENST00000557215 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
CLMN-208ENST00000557215 RB1CC1Q8TDY2 1594 aa18.89■□□□□ 0.61
CLMN-208ENST00000557215 SCAF1Q9H7N4 1312 aaKnown RBP18.77■□□□□ 0.6
CLMN-208ENST00000557215 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
CLMN-208ENST00000557215 CNKSR2Q8WXI2 1034 aa18.58■□□□□ 0.56
CLMN-208ENST00000557215 SLC4A1APQ9BWU0 796 aaKnown RBP18.58■□□□□ 0.56
CLMN-208ENST00000557215 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
CLMN-208ENST00000557215 NPM3O75607 178 aaKnown RBP18.56■□□□□ 0.56
CLMN-208ENST00000557215 SHROOM4Q9ULL8 1493 aa18.48■□□□□ 0.55
CLMN-208ENST00000557215 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
CLMN-208ENST00000557215 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLMN-208ENST00000557215 MAPK8IP2Q13387 824 aaPredicted RBP18.3■□□□□ 0.52
CLMN-208ENST00000557215 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
CLMN-208ENST00000557215 CSRNP3Q8WYN3 585 aa18.15■□□□□ 0.5
CLMN-208ENST00000557215 RNF216Q9NWF9 866 aaPredicted RBP18.07■□□□□ 0.48
CLMN-208ENST00000557215 DMRT2Q9Y5R5 561 aa17.99■□□□□ 0.47
CLMN-208ENST00000557215 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
CLMN-208ENST00000557215 CECR2Q9BXF3 1484 aa17.89■□□□□ 0.45
CLMN-208ENST00000557215 HOXD11P31277 338 aaPredicted RBP17.82■□□□□ 0.44
CLMN-208ENST00000557215 EIF4G1Q04637 1599 aaKnown RBP17.8■□□□□ 0.44
CLMN-208ENST00000557215 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
CLMN-208ENST00000557215 SMARCA4P51532 1647 aa17.76■□□□□ 0.43
CLMN-208ENST00000557215 ZBTB22O15209 634 aa17.76■□□□□ 0.43
CLMN-208ENST00000557215 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
CLMN-208ENST00000557215 FOXD4L1Q9NU39 408 aa17.7■□□□□ 0.42
CLMN-208ENST00000557215 RSF1Q96T23 1441 aaPredicted RBP17.69■□□□□ 0.42
CLMN-208ENST00000557215 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
CLMN-208ENST00000557215 SUPT5HO00267 1087 aaKnown RBP17.58■□□□□ 0.4
CLMN-208ENST00000557215 WIZO95785 1651 aa17.57■□□□□ 0.4
CLMN-208ENST00000557215 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
CLMN-208ENST00000557215 SMARCA2P51531 1590 aa17.56■□□□□ 0.4
CLMN-208ENST00000557215 PEG3Q9GZU2 1588 aa17.56■□□□□ 0.4
CLMN-208ENST00000557215 NCAPD3P42695 1498 aa17.49■□□□□ 0.39
CLMN-208ENST00000557215 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
CLMN-208ENST00000557215 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
CLMN-208ENST00000557215 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
CLMN-208ENST00000557215 SLC4A2P04920 1241 aa17.36■□□□□ 0.37
CLMN-208ENST00000557215 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
CLMN-208ENST00000557215 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
CLMN-208ENST00000557215 MYCNP04198 464 aaPredicted RBP17.19■□□□□ 0.34
CLMN-208ENST00000557215 ATXN8OSP0DMR3 200 aa17.06■□□□□ 0.32
CLMN-208ENST00000557215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.32
CLMN-208ENST00000557215 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.31
CLMN-208ENST00000557215 NESP48681 1621 aa16.99■□□□□ 0.31
CLMN-208ENST00000557215 CFTRP13569 1480 aa16.99■□□□□ 0.31
CLMN-208ENST00000557215 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
CLMN-208ENST00000557215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.86■□□□□ 0.29
CLMN-208ENST00000557215 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
CLMN-208ENST00000557215 PDS5BQ9NTI5 1447 aa16.86■□□□□ 0.29
CLMN-208ENST00000557215 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
CLMN-208ENST00000557215 FANCD2Q9BXW9 1451 aa16.83■□□□□ 0.28
CLMN-208ENST00000557215 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
CLMN-208ENST00000557215 ERCC6Q03468 1493 aa16.78■□□□□ 0.28
CLMN-208ENST00000557215 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.28
CLMN-208ENST00000557215 KIF21AQ7Z4S6 1674 aa16.76■□□□□ 0.27
CLMN-208ENST00000557215 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
CLMN-208ENST00000557215 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
CLMN-208ENST00000557215 WRNQ14191 1432 aaPredicted RBP eCLIP16.67■□□□□ 0.26
CLMN-208ENST00000557215 MRC2Q9UBG0 1479 aa16.67■□□□□ 0.26
CLMN-208ENST00000557215 URB2Q14146 1524 aaKnown RBP16.64■□□□□ 0.25
CLMN-208ENST00000557215 CUX1P39880 1505 aa16.62■□□□□ 0.25
CLMN-208ENST00000557215 SYNJ1O43426 1573 aa16.61■□□□□ 0.25
CLMN-208ENST00000557215 THOC2Q8NI27 1593 aaKnown RBP16.61■□□□□ 0.25
CLMN-208ENST00000557215 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
CLMN-208ENST00000557215 TOPBP1Q92547 1522 aa16.6■□□□□ 0.25
CLMN-208ENST00000557215 ATF5Q9Y2D1 282 aaPredicted RBP16.59■□□□□ 0.25
CLMN-208ENST00000557215 WDR62O43379 1518 aa16.59■□□□□ 0.25
CLMN-208ENST00000557215 APLP2Q06481 763 aa16.58■□□□□ 0.24
CLMN-208ENST00000557215 TOP2BQ02880 1626 aa16.57■□□□□ 0.24
CLMN-208ENST00000557215 TRIM41Q8WV44 630 aa16.57■□□□□ 0.24
CLMN-208ENST00000557215 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
CLMN-208ENST00000557215 FGD5Q6ZNL6 1462 aa16.52■□□□□ 0.23
CLMN-208ENST00000557215 POLA1P09884 1462 aaPredicted RBP16.48■□□□□ 0.23
CLMN-208ENST00000557215 SOGA1O94964 1423 aa16.44■□□□□ 0.22
CLMN-208ENST00000557215 CUX2O14529 1486 aa16.43■□□□□ 0.22
CLMN-208ENST00000557215 RAD54L2Q9Y4B4 1467 aa16.43■□□□□ 0.22
CLMN-208ENST00000557215 FKBP8Q14318 412 aa16.42■□□□□ 0.22
CLMN-208ENST00000557215 IFT140Q96RY7 1462 aa16.4■□□□□ 0.22
CLMN-208ENST00000557215 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
CLMN-208ENST00000557215 ZNF219Q9P2Y4 722 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms