RNA–Protein interactions for RNA: ENST00000556416.1

CLMN-205, Transcript of calmin, humanhuman

TSL 2

Gene CLMN, Length 1,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-205ENST00000556416 FBLN2P98095 1184 aa37.7■■■■□ 3.63
CLMN-205ENST00000556416 CEP170Q5SW79 1584 aa37.64■■■■□ 3.62
CLMN-205ENST00000556416 NUP160Q12769 1436 aa37.58■■■■□ 3.61
CLMN-205ENST00000556416 CLIP1P30622 1438 aa37.57■■■■□ 3.61
CLMN-205ENST00000556416 IQGAP2Q13576 1575 aa37.56■■■■□ 3.6
CLMN-205ENST00000556416 RANGAP1P46060 587 aaPredicted RBP37.55■■■■□ 3.6
CLMN-205ENST00000556416 KIAA0586Q9BVV6 1533 aa37.52■■■■□ 3.6
CLMN-205ENST00000556416 ARHGAP35Q9NRY4 1499 aa37.41■■■■□ 3.58
CLMN-205ENST00000556416 EFCAB5A4FU69 1503 aa37.38■■■■□ 3.58
CLMN-205ENST00000556416 SAMD9Q5K651 1589 aa37.36■■■■□ 3.57
CLMN-205ENST00000556416 UGGT2Q9NYU1 1516 aa37.35■■■■□ 3.57
CLMN-205ENST00000556416 ARAP1Q96P48 1450 aa37.32■■■■□ 3.57
CLMN-205ENST00000556416 CLASP1Q7Z460 1538 aa37.29■■■■□ 3.56
CLMN-205ENST00000556416 SHROOM2Q13796 1616 aa37.21■■■■□ 3.55
CLMN-205ENST00000556416 KIAA0556O60303 1618 aa37.2■■■■□ 3.55
CLMN-205ENST00000556416 P3H3Q8IVL6 736 aa37.19■■■■□ 3.54
CLMN-205ENST00000556416 FHOD3Q2V2M9 1422 aa37.19■■■■□ 3.54
CLMN-205ENST00000556416 DISP1Q96F81 1524 aa37.18■■■■□ 3.54
CLMN-205ENST00000556416 JPH4Q96JJ6 628 aa37.18■■■■□ 3.54
CLMN-205ENST00000556416 VPS8Q8N3P4 1428 aa37.16■■■■□ 3.54
CLMN-205ENST00000556416 OSCARQ8IYS5 282 aa37.09■■■■□ 3.53
CLMN-205ENST00000556416 CARMIL2Q6F5E8 1435 aa37.06■■■■□ 3.52
CLMN-205ENST00000556416 PRG4Q92954 1404 aaPredicted RBP37.05■■■■□ 3.52
CLMN-205ENST00000556416 FMN1Q68DA7 1419 aa36.98■■■■□ 3.51
CLMN-205ENST00000556416 PCF11O94913 1555 aaKnown RBP36.97■■■■□ 3.51
CLMN-205ENST00000556416 ERCC6L2Q5T890 1561 aa36.95■■■■□ 3.51
CLMN-205ENST00000556416 FYCO1Q9BQS8 1478 aa36.85■■■■□ 3.49
CLMN-205ENST00000556416 CASKIN1Q8WXD9 1431 aa36.85■■■■□ 3.49
CLMN-205ENST00000556416 TTBK1Q5TCY1 1321 aaPredicted RBP36.82■■■■□ 3.48
CLMN-205ENST00000556416 RAPGEF6Q8TEU7 1601 aa36.76■■■■□ 3.48
CLMN-205ENST00000556416 HECW1Q76N89 1606 aa36.75■■■■□ 3.47
CLMN-205ENST00000556416 LRRIQ1Q96JM4 1722 aa36.75■■■■□ 3.47
CLMN-205ENST00000556416 PTPRGP23470 1445 aa36.74■■■■□ 3.47
CLMN-205ENST00000556416 CFAP43Q8NDM7 1665 aa36.7■■■■□ 3.47
CLMN-205ENST00000556416 ATP1B4Q9UN42 357 aaPredicted RBP36.7■■■■□ 3.47
CLMN-205ENST00000556416 APLP2Q06481 763 aa36.69■■■■□ 3.46
CLMN-205ENST00000556416 PLB1Q6P1J6 1458 aa36.69■■■■□ 3.46
CLMN-205ENST00000556416 ABCA8O94911 1581 aa36.69■■■■□ 3.46
CLMN-205ENST00000556416 TIAM1Q13009 1591 aa36.67■■■■□ 3.46
CLMN-205ENST00000556416 MAP3K1Q13233 1512 aa36.64■■■■□ 3.46
CLMN-205ENST00000556416 NUP153P49790 1475 aaKnown RBP36.6■■■■□ 3.45
CLMN-205ENST00000556416 PPARGC1BQ86YN6 1023 aaKnown RBP36.6■■■■□ 3.45
CLMN-205ENST00000556416 ARHGEF11O15085 1522 aa36.57■■■■□ 3.45
CLMN-205ENST00000556416 CCDC18Q5T9S5 1454 aa36.57■■■■□ 3.45
CLMN-205ENST00000556416 EPRSP07814 1512 aaKnown RBP36.57■■■■□ 3.44
CLMN-205ENST00000556416 UACAQ9BZF9 1416 aa36.54■■■■□ 3.44
CLMN-205ENST00000556416 CDK13Q14004 1512 aaKnown RBP36.53■■■■□ 3.44
CLMN-205ENST00000556416 ABCC2Q92887 1545 aa36.5■■■■□ 3.43
CLMN-205ENST00000556416 RIMBP3CA6NJZ7 1639 aa36.49■■■■□ 3.43
CLMN-205ENST00000556416 RIMBP3BA6NNM3 1639 aa36.49■■■■□ 3.43
CLMN-205ENST00000556416 RIMBP3Q9UFD9 1639 aa36.49■■■■□ 3.43
CLMN-205ENST00000556416 KANK4Q5T7N3 995 aaPredicted RBP36.46■■■■□ 3.43
CLMN-205ENST00000556416 ARID3CA6NKF2 412 aa36.45■■■■□ 3.43
CLMN-205ENST00000556416 LRRC9Q6ZRR7 1453 aa36.45■■■■□ 3.43
CLMN-205ENST00000556416 UHRF1BP1LA0JNW5 1464 aa36.42■■■■□ 3.42
CLMN-205ENST00000556416 ADCY10Q96PN6 1610 aa36.39■■■■□ 3.42
CLMN-205ENST00000556416 ATP10BO94823 1461 aa36.37■■■■□ 3.41
CLMN-205ENST00000556416 MAGI3Q5TCQ9 1506 aa36.36■■■■□ 3.41
CLMN-205ENST00000556416 EHBP1L1Q8N3D4 1523 aa36.34■■■■□ 3.41
CLMN-205ENST00000556416 MTUS2Q5JR59 1369 aa36.31■■■■□ 3.4
CLMN-205ENST00000556416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.3■■■■□ 3.4
CLMN-205ENST00000556416 HNRNPUL2Q1KMD3 747 aaKnown RBP36.3■■■■□ 3.4
CLMN-205ENST00000556416 ZCCHC11Q5TAX3 1644 aaKnown RBP36.3■■■■□ 3.4
CLMN-205ENST00000556416 KDM5BQ9UGL1 1544 aa36.26■■■■□ 3.4
CLMN-205ENST00000556416 SUPT6HQ7KZ85 1726 aaKnown RBP36.24■■■■□ 3.39
CLMN-205ENST00000556416 CDK11AQ9UQ88 783 aaPredicted RBP36.22■■■■□ 3.39
CLMN-205ENST00000556416 TROQ12816 1431 aaPredicted RBP36.17■■■■□ 3.38
CLMN-205ENST00000556416 CYB5RLQ6IPT4 315 aa36.13■■■■□ 3.37
CLMN-205ENST00000556416 NCOA2Q15596 1464 aa36.12■■■■□ 3.37
CLMN-205ENST00000556416 PLEKHD1A6NEE1 506 aa36.11■■■■□ 3.37
CLMN-205ENST00000556416 TRIM26Q12899 539 aaPredicted RBP36.1■■■■□ 3.37
CLMN-205ENST00000556416 KIF14Q15058 1648 aa36.09■■■■□ 3.37
CLMN-205ENST00000556416 PHLDB1Q86UU1 1377 aa36.06■■■■□ 3.36
CLMN-205ENST00000556416 NPM1P06748 294 aaKnown RBP eCLIP35.98■■■■□ 3.35
CLMN-205ENST00000556416 WDR7Q9Y4E6 1490 aa35.94■■■■□ 3.34
CLMN-205ENST00000556416 MYOM3Q5VTT5 1437 aa35.93■■■■□ 3.34
CLMN-205ENST00000556416 RRBP1Q9P2E9 1410 aaKnown RBP35.93■■■■□ 3.34
CLMN-205ENST00000556416 ASXL2Q76L83 1435 aa35.93■■■■□ 3.34
CLMN-205ENST00000556416 ABCC10Q5T3U5 1492 aa35.91■■■■□ 3.34
CLMN-205ENST00000556416 PCGF6Q9BYE7 350 aa35.9■■■■□ 3.34
CLMN-205ENST00000556416 ITSN2Q9NZM3 1697 aa35.9■■■■□ 3.34
CLMN-205ENST00000556416 CDC42BPAQ5VT25 1732 aa35.87■■■■□ 3.33
CLMN-205ENST00000556416 FGD6Q6ZV73 1430 aa35.87■■■■□ 3.33
CLMN-205ENST00000556416 CCNB3Q8WWL7 1395 aa35.87■■■■□ 3.33
CLMN-205ENST00000556416 TTC37Q6PGP7 1564 aa35.86■■■■□ 3.33
CLMN-205ENST00000556416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.86■■■■□ 3.33
CLMN-205ENST00000556416 MAPKBP1O60336 1514 aa35.85■■■■□ 3.33
CLMN-205ENST00000556416 KCNH8Q96L42 1107 aa35.83■■■■□ 3.33
CLMN-205ENST00000556416 GPATCH8Q9UKJ3 1502 aaKnown RBP35.81■■■■□ 3.32
CLMN-205ENST00000556416 DNAJC5Q9H3Z4 198 aa35.8■■■■□ 3.32
CLMN-205ENST00000556416 PTPN23Q9H3S7 1636 aa35.79■■■■□ 3.32
CLMN-205ENST00000556416 MYO5CQ9NQX4 1742 aa35.78■■■■□ 3.32
CLMN-205ENST00000556416 PREX2Q70Z35 1606 aa35.77■■■■□ 3.32
CLMN-205ENST00000556416 MIA2Q96PC5 1412 aa35.77■■■■□ 3.32
CLMN-205ENST00000556416 ABCA9Q8IUA7 1624 aa35.74■■■■□ 3.31
CLMN-205ENST00000556416 CDC42BPBQ9Y5S2 1711 aa35.74■■■■□ 3.31
CLMN-205ENST00000556416 TCOF1Q13428 1488 aaKnown RBP35.7■■■■□ 3.31
CLMN-205ENST00000556416 FAM50AQ14320 339 aaKnown RBP35.69■■■■□ 3.3
CLMN-205ENST00000556416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.67■■■■□ 3.3
CLMN-205ENST00000556416 CFDP1Q9UEE9 299 aaPredicted RBP35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms