RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 RAPGEF2Q9Y4G8 1499 aa33.66■■■□□ 2.98
RCCD1-205ENST00000556333 TRHP20396 242 aaPredicted RBP33.63■■■□□ 2.97
RCCD1-205ENST00000556333 CSRNP3Q8WYN3 585 aa33.61■■■□□ 2.97
RCCD1-205ENST00000556333 PRXQ9BXM0 1461 aa33.53■■■□□ 2.96
RCCD1-205ENST00000556333 SHROOM2Q13796 1616 aa33.52■■■□□ 2.96
RCCD1-205ENST00000556333 KIAA0586Q9BVV6 1533 aa33.5■■■□□ 2.95
RCCD1-205ENST00000556333 CTTNBP2Q8WZ74 1663 aa33.48■■■□□ 2.95
RCCD1-205ENST00000556333 ARAP1Q96P48 1450 aa33.46■■■□□ 2.95
RCCD1-205ENST00000556333 JPH4Q96JJ6 628 aa33.43■■■□□ 2.94
RCCD1-205ENST00000556333 IQGAP2Q13576 1575 aa33.43■■■□□ 2.94
RCCD1-205ENST00000556333 ERCC6L2Q5T890 1561 aa33.39■■■□□ 2.94
RCCD1-205ENST00000556333 KIF21BO75037 1637 aa33.37■■■□□ 2.93
RCCD1-205ENST00000556333 PRG4Q92954 1404 aaPredicted RBP33.36■■■□□ 2.93
RCCD1-205ENST00000556333 EHMT2Q96KQ7 1210 aa33.27■■■□□ 2.92
RCCD1-205ENST00000556333 CARMIL2Q6F5E8 1435 aa33.18■■■□□ 2.9
RCCD1-205ENST00000556333 UGGT2Q9NYU1 1516 aa33.18■■■□□ 2.9
RCCD1-205ENST00000556333 GOLGA3Q08378 1498 aa33.17■■■□□ 2.9
RCCD1-205ENST00000556333 AEBP2Q6ZN18 517 aaPredicted RBP33.13■■■□□ 2.89
RCCD1-205ENST00000556333 UBTFP17480 764 aaKnown RBP33.12■■■□□ 2.89
RCCD1-205ENST00000556333 KIAA0556O60303 1618 aa33.1■■■□□ 2.89
RCCD1-205ENST00000556333 DISP1Q96F81 1524 aa33.09■■■□□ 2.89
RCCD1-205ENST00000556333 TTBK1Q5TCY1 1321 aaPredicted RBP33.07■■■□□ 2.88
RCCD1-205ENST00000556333 RANGAP1P46060 587 aaPredicted RBP33.04■■■□□ 2.88
RCCD1-205ENST00000556333 TNIKQ9UKE5 1360 aa33.02■■■□□ 2.88
RCCD1-205ENST00000556333 PTPRGP23470 1445 aa32.99■■■□□ 2.87
RCCD1-205ENST00000556333 SAMD9Q5K651 1589 aa32.92■■■□□ 2.86
RCCD1-205ENST00000556333 P3H3Q8IVL6 736 aa32.91■■■□□ 2.86
RCCD1-205ENST00000556333 ADCY10Q96PN6 1610 aa32.87■■■□□ 2.85
RCCD1-205ENST00000556333 EFCAB5A4FU69 1503 aa32.82■■■□□ 2.85
RCCD1-205ENST00000556333 UACAQ9BZF9 1416 aa32.77■■■□□ 2.84
RCCD1-205ENST00000556333 NPM1P06748 294 aaKnown RBP eCLIP32.76■■■□□ 2.83
RCCD1-205ENST00000556333 FHOD3Q2V2M9 1422 aa32.75■■■□□ 2.83
RCCD1-205ENST00000556333 ABCC2Q92887 1545 aa32.72■■■□□ 2.83
RCCD1-205ENST00000556333 PLB1Q6P1J6 1458 aa32.71■■■□□ 2.83
RCCD1-205ENST00000556333 UHRF1BP1LA0JNW5 1464 aa32.69■■■□□ 2.82
RCCD1-205ENST00000556333 ABCA8O94911 1581 aa32.68■■■□□ 2.82
RCCD1-205ENST00000556333 ARHGAP35Q9NRY4 1499 aa32.67■■■□□ 2.82
RCCD1-205ENST00000556333 LOC105371045A0A1W2PR82 267 aa32.66■■■□□ 2.82
RCCD1-205ENST00000556333 RAPGEF6Q8TEU7 1601 aa32.63■■■□□ 2.81
RCCD1-205ENST00000556333 ZCCHC11Q5TAX3 1644 aaKnown RBP32.61■■■□□ 2.81
RCCD1-205ENST00000556333 CLIP1P30622 1438 aa32.57■■■□□ 2.8
RCCD1-205ENST00000556333 MAPKBP1O60336 1514 aa32.56■■■□□ 2.8
RCCD1-205ENST00000556333 KDM5BQ9UGL1 1544 aa32.55■■■□□ 2.8
RCCD1-205ENST00000556333 FMN1Q68DA7 1419 aa32.51■■■□□ 2.79
RCCD1-205ENST00000556333 ARID3CA6NKF2 412 aa32.49■■■□□ 2.79
RCCD1-205ENST00000556333 KIF13AQ9H1H9 1805 aa32.48■■■□□ 2.79
RCCD1-205ENST00000556333 CEP162Q5TB80 1403 aa32.48■■■□□ 2.79
RCCD1-205ENST00000556333 ASXL2Q76L83 1435 aa32.44■■■□□ 2.78
RCCD1-205ENST00000556333 ATP1B4Q9UN42 357 aaPredicted RBP32.42■■■□□ 2.78
RCCD1-205ENST00000556333 NUP153P49790 1475 aaKnown RBP32.42■■■□□ 2.78
RCCD1-205ENST00000556333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.41■■■□□ 2.78
RCCD1-205ENST00000556333 HNRNPUL2Q1KMD3 747 aaKnown RBP32.41■■■□□ 2.78
RCCD1-205ENST00000556333 HECW1Q76N89 1606 aa32.4■■■□□ 2.78
RCCD1-205ENST00000556333 ATP10BO94823 1461 aa32.39■■■□□ 2.78
RCCD1-205ENST00000556333 DIP2BQ9P265 1576 aa32.39■■■□□ 2.78
RCCD1-205ENST00000556333 ABCC10Q5T3U5 1492 aa32.37■■■□□ 2.77
RCCD1-205ENST00000556333 PCF11O94913 1555 aaKnown RBP32.34■■■□□ 2.77
RCCD1-205ENST00000556333 FAM69CQ0P6D2 419 aa32.33■■■□□ 2.77
RCCD1-205ENST00000556333 WDR7Q9Y4E6 1490 aa32.32■■■□□ 2.76
RCCD1-205ENST00000556333 LRRIQ1Q96JM4 1722 aa32.3■■■□□ 2.76
RCCD1-205ENST00000556333 TSPOAP1O95153 1857 aa32.29■■■□□ 2.76
RCCD1-205ENST00000556333 CDK13Q14004 1512 aaKnown RBP32.27■■■□□ 2.76
RCCD1-205ENST00000556333 EPRSP07814 1512 aaKnown RBP32.25■■■□□ 2.75
RCCD1-205ENST00000556333 CASKIN1Q8WXD9 1431 aa32.25■■■□□ 2.75
RCCD1-205ENST00000556333 KCNH8Q96L42 1107 aa32.24■■■□□ 2.75
RCCD1-205ENST00000556333 FYCO1Q9BQS8 1478 aa32.22■■■□□ 2.75
RCCD1-205ENST00000556333 GLI2P10070 1586 aa32.21■■■□□ 2.75
RCCD1-205ENST00000556333 PLEKHD1A6NEE1 506 aa32.17■■■□□ 2.74
RCCD1-205ENST00000556333 CCDC18Q5T9S5 1454 aa32.14■■■□□ 2.74
RCCD1-205ENST00000556333 MAP3K4Q9Y6R4 1608 aa32.14■■■□□ 2.74
RCCD1-205ENST00000556333 CFAP43Q8NDM7 1665 aa32.12■■■□□ 2.73
RCCD1-205ENST00000556333 CDK11AQ9UQ88 783 aaPredicted RBP32.1■■■□□ 2.73
RCCD1-205ENST00000556333 VPS8Q8N3P4 1428 aa32.06■■■□□ 2.72
RCCD1-205ENST00000556333 PPRC1Q5VV67 1664 aaKnown RBP32.05■■■□□ 2.72
RCCD1-205ENST00000556333 ABCA9Q8IUA7 1624 aa32.04■■■□□ 2.72
RCCD1-205ENST00000556333 CD109Q6YHK3 1445 aa32■■■□□ 2.71
RCCD1-205ENST00000556333 KIF14Q15058 1648 aa31.97■■■□□ 2.71
RCCD1-205ENST00000556333 TROQ12816 1431 aaPredicted RBP31.96■■■□□ 2.71
RCCD1-205ENST00000556333 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.95■■■□□ 2.7
RCCD1-205ENST00000556333 TEX14Q8IWB6 1497 aa31.94■■■□□ 2.7
RCCD1-205ENST00000556333 KDM4FA0A1W2PPD8 638 aa31.93■■■□□ 2.7
RCCD1-205ENST00000556333 MAGI3Q5TCQ9 1506 aa31.93■■■□□ 2.7
RCCD1-205ENST00000556333 TTC37Q6PGP7 1564 aa31.93■■■□□ 2.7
RCCD1-205ENST00000556333 MYO5CQ9NQX4 1742 aa31.88■■■□□ 2.69
RCCD1-205ENST00000556333 KDM6BO15054 1643 aa31.87■■■□□ 2.69
RCCD1-205ENST00000556333 TIAM1Q13009 1591 aa31.86■■■□□ 2.69
RCCD1-205ENST00000556333 MTUS2Q5JR59 1369 aa31.85■■■□□ 2.69
RCCD1-205ENST00000556333 EHBP1L1Q8N3D4 1523 aa31.8■■■□□ 2.68
RCCD1-205ENST00000556333 APLP2Q06481 763 aa31.79■■■□□ 2.68
RCCD1-205ENST00000556333 CFAP74Q9C0B2 1584 aa31.77■■■□□ 2.68
RCCD1-205ENST00000556333 CDC42BPAQ5VT25 1732 aa31.74■■■□□ 2.67
RCCD1-205ENST00000556333 MAP3K1Q13233 1512 aa31.73■■■□□ 2.67
RCCD1-205ENST00000556333 SUPT6HQ7KZ85 1726 aaKnown RBP31.72■■■□□ 2.67
RCCD1-205ENST00000556333 CDC42BPBQ9Y5S2 1711 aa31.72■■■□□ 2.67
RCCD1-205ENST00000556333 FANCAO15360 1455 aa31.72■■■□□ 2.67
RCCD1-205ENST00000556333 PLCH2O75038 1416 aa31.71■■■□□ 2.67
RCCD1-205ENST00000556333 PREX2Q70Z35 1606 aa31.7■■■□□ 2.66
RCCD1-205ENST00000556333 NEO1Q92859 1461 aa31.7■■■□□ 2.66
RCCD1-205ENST00000556333 ARHGAP5Q13017 1502 aa31.69■■■□□ 2.66
RCCD1-205ENST00000556333 LRRC9Q6ZRR7 1453 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms