RNA–Protein interactions for RNA: ENST00000556330.5

SRSF5-213, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-213ENST00000556330 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
SRSF5-213ENST00000556330 RAPGEF2Q9Y4G8 1499 aa15.2■□□□□ 0.02
SRSF5-213ENST00000556330 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
SRSF5-213ENST00000556330 CEP162Q5TB80 1403 aa15.17■□□□□ 0.02
SRSF5-213ENST00000556330 DCAF8L1A6NGE4 600 aa15.16■□□□□ 0.02
SRSF5-213ENST00000556330 EHMT2Q96KQ7 1210 aa15.16■□□□□ 0.02
SRSF5-213ENST00000556330 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
SRSF5-213ENST00000556330 TDRD9Q8NDG6 1382 aaKnown RBP15.13■□□□□ 0.01
SRSF5-213ENST00000556330 FHAD1B1AJZ9 1412 aa15.09■□□□□ 0.01
SRSF5-213ENST00000556330 CLIP1P30622 1438 aa15.09■□□□□ 0.01
SRSF5-213ENST00000556330 PBRM1Q86U86 1689 aa15.08■□□□□ 0
SRSF5-213ENST00000556330 POTEDQ86YR6 584 aa15.06■□□□□ 0
SRSF5-213ENST00000556330 MAGI1Q96QZ7 1491 aaPredicted RBP15.05■□□□□ -0
SRSF5-213ENST00000556330 EIF4G3O43432 1585 aaKnown RBP15.04■□□□□ -0
SRSF5-213ENST00000556330 AQRO60306 1485 aaKnown RBP eCLIP15.03■□□□□ -02e-10■■■■□ 20.3
SRSF5-213ENST00000556330 ADAMTS12P58397 1594 aa15.02■□□□□ -0
SRSF5-213ENST00000556330 ZNF608Q9ULD9 1512 aaPredicted RBP15.02□□□□□ -0.01
SRSF5-213ENST00000556330 EFCAB5A4FU69 1503 aa14.98□□□□□ -0.01
SRSF5-213ENST00000556330 CTTNBP2Q8WZ74 1663 aa14.97□□□□□ -0.01
SRSF5-213ENST00000556330 VPS8Q8N3P4 1428 aa14.97□□□□□ -0.01
SRSF5-213ENST00000556330 SYNJ2O15056 1496 aa14.96□□□□□ -0.01
SRSF5-213ENST00000556330 SNAPC4Q5SXM2 1469 aa14.95□□□□□ -0.02
SRSF5-213ENST00000556330 GRIN2AQ12879 1464 aa14.92□□□□□ -0.02
SRSF5-213ENST00000556330 ARHGAP35Q9NRY4 1499 aa14.9□□□□□ -0.02
SRSF5-213ENST00000556330 FOXD4L1Q9NU39 408 aa14.9□□□□□ -0.02
SRSF5-213ENST00000556330 APLP2Q06481 763 aa14.89□□□□□ -0.03
SRSF5-213ENST00000556330 CHMP7Q8WUX9 453 aaPredicted RBP14.89□□□□□ -0.03
SRSF5-213ENST00000556330 KIAA0586Q9BVV6 1533 aa14.88□□□□□ -0.03
SRSF5-213ENST00000556330 IQGAP2Q13576 1575 aa14.88□□□□□ -0.03
SRSF5-213ENST00000556330 ARAP1Q96P48 1450 aa14.88□□□□□ -0.03
SRSF5-213ENST00000556330 FMN1Q68DA7 1419 aa14.84□□□□□ -0.03
SRSF5-213ENST00000556330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.03
SRSF5-213ENST00000556330 SAMD9Q5K651 1589 aa14.84□□□□□ -0.03
SRSF5-213ENST00000556330 UGGT2Q9NYU1 1516 aa14.83□□□□□ -0.04
SRSF5-213ENST00000556330 TRIM26Q12899 539 aaPredicted RBP14.83□□□□□ -0.04
SRSF5-213ENST00000556330 NUP160Q12769 1436 aa14.83□□□□□ -0.04
SRSF5-213ENST00000556330 SLC4A2P04920 1241 aa14.82□□□□□ -0.04
SRSF5-213ENST00000556330 RANGAP1P46060 587 aaPredicted RBP14.81□□□□□ -0.04
SRSF5-213ENST00000556330 MAP3K1Q13233 1512 aa14.81□□□□□ -0.04
SRSF5-213ENST00000556330 ZBTB22O15209 634 aa14.8□□□□□ -0.04
SRSF5-213ENST00000556330 FYCO1Q9BQS8 1478 aa14.78□□□□□ -0.04
SRSF5-213ENST00000556330 CARMIL2Q6F5E8 1435 aa14.75□□□□□ -0.05
SRSF5-213ENST00000556330 CASKIN1Q8WXD9 1431 aa14.75□□□□□ -0.05
SRSF5-213ENST00000556330 FBLN2P98095 1184 aa14.75□□□□□ -0.05
SRSF5-213ENST00000556330 CEP170Q5SW79 1584 aa14.75□□□□□ -0.05
SRSF5-213ENST00000556330 FHOD3Q2V2M9 1422 aa14.73□□□□□ -0.05
SRSF5-213ENST00000556330 KIAA0556O60303 1618 aa14.7□□□□□ -0.06
SRSF5-213ENST00000556330 CCDC18Q5T9S5 1454 aa14.68□□□□□ -0.06
SRSF5-213ENST00000556330 PCF11O94913 1555 aaKnown RBP14.68□□□□□ -0.06
SRSF5-213ENST00000556330 DISP1Q96F81 1524 aa14.67□□□□□ -0.06
SRSF5-213ENST00000556330 CHD1O14646 1710 aa14.67□□□□□ -0.06
SRSF5-213ENST00000556330 JPH4Q96JJ6 628 aa14.67□□□□□ -0.06
SRSF5-213ENST00000556330 TIAM1Q13009 1591 aa14.67□□□□□ -0.06
SRSF5-213ENST00000556330 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
SRSF5-213ENST00000556330 PCGF6Q9BYE7 350 aa14.66□□□□□ -0.06
SRSF5-213ENST00000556330 HECW1Q76N89 1606 aa14.66□□□□□ -0.06
SRSF5-213ENST00000556330 P3H3Q8IVL6 736 aa14.65□□□□□ -0.06
SRSF5-213ENST00000556330 CFAP43Q8NDM7 1665 aa14.65□□□□□ -0.06
SRSF5-213ENST00000556330 SHROOM2Q13796 1616 aa14.62□□□□□ -0.07
SRSF5-213ENST00000556330 LRRC9Q6ZRR7 1453 aa14.61□□□□□ -0.07
SRSF5-213ENST00000556330 CLASP1Q7Z460 1538 aa14.59□□□□□ -0.07
SRSF5-213ENST00000556330 PRG4Q92954 1404 aaPredicted RBP14.58□□□□□ -0.08
SRSF5-213ENST00000556330 ATP1B4Q9UN42 357 aaPredicted RBP14.57□□□□□ -0.08
SRSF5-213ENST00000556330 CDK11AQ9UQ88 783 aaPredicted RBP14.56□□□□□ -0.08
SRSF5-213ENST00000556330 RAPGEF6Q8TEU7 1601 aa14.55□□□□□ -0.08
SRSF5-213ENST00000556330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.55□□□□□ -0.08
SRSF5-213ENST00000556330 HNRNPUL2Q1KMD3 747 aaKnown RBP14.55□□□□□ -0.08
SRSF5-213ENST00000556330 PPARGC1BQ86YN6 1023 aaKnown RBP14.55□□□□□ -0.08
SRSF5-213ENST00000556330 EHBP1L1Q8N3D4 1523 aa14.55□□□□□ -0.08
SRSF5-213ENST00000556330 MTUS2Q5JR59 1369 aa14.54□□□□□ -0.08
SRSF5-213ENST00000556330 EPRSP07814 1512 aaKnown RBP14.54□□□□□ -0.08
SRSF5-213ENST00000556330 KANK4Q5T7N3 995 aaPredicted RBP14.53□□□□□ -0.08
SRSF5-213ENST00000556330 PTPRGP23470 1445 aa14.52□□□□□ -0.08
SRSF5-213ENST00000556330 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
SRSF5-213ENST00000556330 RRBP1Q9P2E9 1410 aaKnown RBP14.51□□□□□ -0.09
SRSF5-213ENST00000556330 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
SRSF5-213ENST00000556330 ABCA8O94911 1581 aa14.49□□□□□ -0.09
SRSF5-213ENST00000556330 NUP153P49790 1475 aaKnown RBP14.49□□□□□ -0.09
SRSF5-213ENST00000556330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.48□□□□□ -0.09
SRSF5-213ENST00000556330 SUPT6HQ7KZ85 1726 aaKnown RBP14.47□□□□□ -0.09
SRSF5-213ENST00000556330 CCNB3Q8WWL7 1395 aa14.47□□□□□ -0.09
SRSF5-213ENST00000556330 TTBK1Q5TCY1 1321 aaPredicted RBP14.46□□□□□ -0.09
SRSF5-213ENST00000556330 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.09
SRSF5-213ENST00000556330 PLB1Q6P1J6 1458 aa14.45□□□□□ -0.1
SRSF5-213ENST00000556330 UACAQ9BZF9 1416 aa14.45□□□□□ -0.1
SRSF5-213ENST00000556330 LRRIQ1Q96JM4 1722 aa14.44□□□□□ -0.1
SRSF5-213ENST00000556330 UHRF1BP1LA0JNW5 1464 aa14.43□□□□□ -0.1
SRSF5-213ENST00000556330 ARHGEF11O15085 1522 aa14.42□□□□□ -0.1
SRSF5-213ENST00000556330 RNF39Q9H2S5 420 aa14.42□□□□□ -0.1
SRSF5-213ENST00000556330 NCOA2Q15596 1464 aa14.42□□□□□ -0.1
SRSF5-213ENST00000556330 CDK13Q14004 1512 aaKnown RBP14.41□□□□□ -0.1
SRSF5-213ENST00000556330 ABCC2Q92887 1545 aa14.41□□□□□ -0.1
SRSF5-213ENST00000556330 TROQ12816 1431 aaPredicted RBP14.41□□□□□ -0.1
SRSF5-213ENST00000556330 MYOM3Q5VTT5 1437 aa14.41□□□□□ -0.1
SRSF5-213ENST00000556330 PHLDB1Q86UU1 1377 aa14.4□□□□□ -0.1
SRSF5-213ENST00000556330 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
SRSF5-213ENST00000556330 MIA2Q96PC5 1412 aa14.4□□□□□ -0.1
SRSF5-213ENST00000556330 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
SRSF5-213ENST00000556330 FGD6Q6ZV73 1430 aa14.38□□□□□ -0.11
SRSF5-213ENST00000556330 ATP10BO94823 1461 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms