RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 IGF1RP08069 1367 aa37.52■■■■□ 3.6
SDR39U1-216ENST00000556175 JPH4Q96JJ6 628 aa37.51■■■■□ 3.6
SDR39U1-216ENST00000556175 KIAA0586Q9BVV6 1533 aa37.39■■■■□ 3.58
SDR39U1-216ENST00000556175 CARMIL1Q5VZK9 1371 aa37.29■■■■□ 3.56
SDR39U1-216ENST00000556175 NPM1P06748 294 aaKnown RBP eCLIP37.13■■■■□ 3.53
SDR39U1-216ENST00000556175 ADCY10Q96PN6 1610 aa37.08■■■■□ 3.53
SDR39U1-216ENST00000556175 IQGAP2Q13576 1575 aa37.07■■■■□ 3.52
SDR39U1-216ENST00000556175 KIF13AQ9H1H9 1805 aa37.06■■■■□ 3.52
SDR39U1-216ENST00000556175 MAPKBP1O60336 1514 aa37.05■■■■□ 3.52
SDR39U1-216ENST00000556175 CARMIL2Q6F5E8 1435 aa37.05■■■■□ 3.52
SDR39U1-216ENST00000556175 RAPGEF2Q9Y4G8 1499 aa37.01■■■■□ 3.52
SDR39U1-216ENST00000556175 PTPRGP23470 1445 aa36.99■■■■□ 3.51
SDR39U1-216ENST00000556175 ABCC10Q5T3U5 1492 aa36.97■■■■□ 3.51
SDR39U1-216ENST00000556175 TNIKQ9UKE5 1360 aa36.96■■■■□ 3.51
SDR39U1-216ENST00000556175 FAM69CQ0P6D2 419 aa36.89■■■■□ 3.5
SDR39U1-216ENST00000556175 DIP2BQ9P265 1576 aa36.88■■■■□ 3.49
SDR39U1-216ENST00000556175 DISP1Q96F81 1524 aa36.83■■■■□ 3.49
SDR39U1-216ENST00000556175 UGGT2Q9NYU1 1516 aa36.83■■■■□ 3.49
SDR39U1-216ENST00000556175 TTBK1Q5TCY1 1321 aaPredicted RBP36.83■■■■□ 3.49
SDR39U1-216ENST00000556175 ABCC2Q92887 1545 aa36.8■■■■□ 3.48
SDR39U1-216ENST00000556175 UHRF1BP1LA0JNW5 1464 aa36.76■■■■□ 3.48
SDR39U1-216ENST00000556175 KIAA0556O60303 1618 aa36.72■■■■□ 3.47
SDR39U1-216ENST00000556175 CTTNBP2Q8WZ74 1663 aa36.72■■■■□ 3.47
SDR39U1-216ENST00000556175 UACAQ9BZF9 1416 aa36.72■■■■□ 3.47
SDR39U1-216ENST00000556175 PRXQ9BXM0 1461 aa36.66■■■■□ 3.46
SDR39U1-216ENST00000556175 PLB1Q6P1J6 1458 aa36.64■■■■□ 3.46
SDR39U1-216ENST00000556175 AEBP2Q6ZN18 517 aaPredicted RBP36.63■■■■□ 3.45
SDR39U1-216ENST00000556175 ASXL2Q76L83 1435 aa36.62■■■■□ 3.45
SDR39U1-216ENST00000556175 GOLGA3Q08378 1498 aa36.61■■■■□ 3.45
SDR39U1-216ENST00000556175 KDM5BQ9UGL1 1544 aa36.57■■■■□ 3.44
SDR39U1-216ENST00000556175 TSPOAP1O95153 1857 aa36.56■■■■□ 3.44
SDR39U1-216ENST00000556175 GLI2P10070 1586 aa36.53■■■■□ 3.44
SDR39U1-216ENST00000556175 KDM6BO15054 1643 aa36.53■■■■□ 3.44
SDR39U1-216ENST00000556175 ZCCHC11Q5TAX3 1644 aaKnown RBP36.48■■■■□ 3.43
SDR39U1-216ENST00000556175 CSRNP3Q8WYN3 585 aa36.41■■■■□ 3.42
SDR39U1-216ENST00000556175 EPRSP07814 1512 aaKnown RBP36.4■■■■□ 3.42
SDR39U1-216ENST00000556175 EEA1Q15075 1411 aa36.39■■■■□ 3.42
SDR39U1-216ENST00000556175 ABCA8O94911 1581 aa36.36■■■■□ 3.41
SDR39U1-216ENST00000556175 PPRC1Q5VV67 1664 aaKnown RBP36.35■■■■□ 3.41
SDR39U1-216ENST00000556175 WDR7Q9Y4E6 1490 aa36.32■■■■□ 3.41
SDR39U1-216ENST00000556175 FAM9AQ8IZU1 332 aaPredicted RBP36.32■■■■□ 3.4
SDR39U1-216ENST00000556175 MAP3K4Q9Y6R4 1608 aa36.32■■■■□ 3.4
SDR39U1-216ENST00000556175 TEX14Q8IWB6 1497 aa36.27■■■■□ 3.4
SDR39U1-216ENST00000556175 SAMD9Q5K651 1589 aa36.2■■■■□ 3.39
SDR39U1-216ENST00000556175 P3H3Q8IVL6 736 aa36.14■■■■□ 3.38
SDR39U1-216ENST00000556175 CFAP43Q8NDM7 1665 aa36.11■■■■□ 3.37
SDR39U1-216ENST00000556175 KCNH8Q96L42 1107 aa36.06■■■■□ 3.36
SDR39U1-216ENST00000556175 MAGI3Q5TCQ9 1506 aa36.06■■■■□ 3.36
SDR39U1-216ENST00000556175 CD109Q6YHK3 1445 aa36.06■■■■□ 3.36
SDR39U1-216ENST00000556175 COL17A1Q9UMD9 1497 aaPredicted RBP36.05■■■■□ 3.36
SDR39U1-216ENST00000556175 KIF21BO75037 1637 aa36.05■■■■□ 3.36
SDR39U1-216ENST00000556175 RAPGEF6Q8TEU7 1601 aa36.02■■■■□ 3.36
SDR39U1-216ENST00000556175 ATP10BO94823 1461 aa36.02■■■■□ 3.36
SDR39U1-216ENST00000556175 KDM4FA0A1W2PPD8 638 aa35.98■■■■□ 3.35
SDR39U1-216ENST00000556175 ARID3CA6NKF2 412 aa35.97■■■■□ 3.35
SDR39U1-216ENST00000556175 EFCAB5A4FU69 1503 aa35.93■■■■□ 3.34
SDR39U1-216ENST00000556175 RANGAP1P46060 587 aaPredicted RBP35.92■■■■□ 3.34
SDR39U1-216ENST00000556175 FHOD3Q2V2M9 1422 aa35.91■■■■□ 3.34
SDR39U1-216ENST00000556175 NUP153P49790 1475 aaKnown RBP35.86■■■■□ 3.33
SDR39U1-216ENST00000556175 ABCA9Q8IUA7 1624 aa35.86■■■■□ 3.33
SDR39U1-216ENST00000556175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.84■■■■□ 3.33
SDR39U1-216ENST00000556175 HNRNPUL2Q1KMD3 747 aaKnown RBP35.84■■■■□ 3.33
SDR39U1-216ENST00000556175 CHIC1Q5VXU3 224 aa35.84■■■■□ 3.33
SDR39U1-216ENST00000556175 ADGRL1O94910 1474 aa35.82■■■■□ 3.32
SDR39U1-216ENST00000556175 ARAP3Q8WWN8 1544 aa35.77■■■■□ 3.32
SDR39U1-216ENST00000556175 PHLDB1Q86UU1 1377 aa35.76■■■■□ 3.32
SDR39U1-216ENST00000556175 UBTFP17480 764 aaKnown RBP35.72■■■■□ 3.31
SDR39U1-216ENST00000556175 PLEKHD1A6NEE1 506 aa35.68■■■■□ 3.3
SDR39U1-216ENST00000556175 NEO1Q92859 1461 aa35.67■■■■□ 3.3
SDR39U1-216ENST00000556175 EHMT2Q96KQ7 1210 aa35.61■■■■□ 3.29
SDR39U1-216ENST00000556175 FMN1Q68DA7 1419 aa35.59■■■■□ 3.29
SDR39U1-216ENST00000556175 ARHGAP35Q9NRY4 1499 aa35.54■■■■□ 3.28
SDR39U1-216ENST00000556175 HECW1Q76N89 1606 aa35.52■■■■□ 3.28
SDR39U1-216ENST00000556175 CDK13Q14004 1512 aaKnown RBP35.51■■■■□ 3.27
SDR39U1-216ENST00000556175 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.5■■■■□ 3.27
SDR39U1-216ENST00000556175 CFAP74Q9C0B2 1584 aa35.5■■■■□ 3.27
SDR39U1-216ENST00000556175 RAPGEF3O95398 923 aa35.47■■■■□ 3.27
SDR39U1-216ENST00000556175 TTC37Q6PGP7 1564 aa35.45■■■■□ 3.27
SDR39U1-216ENST00000556175 FANCAO15360 1455 aa35.44■■■■□ 3.26
SDR39U1-216ENST00000556175 FRMPD1Q5SYB0 1578 aa35.43■■■■□ 3.26
SDR39U1-216ENST00000556175 ATP1B4Q9UN42 357 aaPredicted RBP35.41■■■■□ 3.26
SDR39U1-216ENST00000556175 AKNAQ7Z591 1439 aa35.4■■■■□ 3.26
SDR39U1-216ENST00000556175 DENND4BO75064 1496 aaPredicted RBP35.4■■■■□ 3.26
SDR39U1-216ENST00000556175 CDK11AQ9UQ88 783 aaPredicted RBP35.39■■■■□ 3.26
SDR39U1-216ENST00000556175 RICTORQ6R327 1708 aa35.34■■■■□ 3.25
SDR39U1-216ENST00000556175 ARHGEF40Q8TER5 1519 aa35.3■■■■□ 3.24
SDR39U1-216ENST00000556175 PLCH2O75038 1416 aa35.3■■■■□ 3.24
SDR39U1-216ENST00000556175 HECW2Q9P2P5 1572 aa35.26■■■■□ 3.24
SDR39U1-216ENST00000556175 KIF14Q15058 1648 aa35.26■■■■□ 3.24
SDR39U1-216ENST00000556175 ZMYM4Q5VZL5 1548 aa35.26■■■■□ 3.23
SDR39U1-216ENST00000556175 CLIP1P30622 1438 aa35.24■■■■□ 3.23
SDR39U1-216ENST00000556175 TROQ12816 1431 aaPredicted RBP35.24■■■■□ 3.23
SDR39U1-216ENST00000556175 ADAMTSL3P82987 1691 aa35.24■■■■□ 3.23
SDR39U1-216ENST00000556175 MYO5CQ9NQX4 1742 aa35.24■■■■□ 3.23
SDR39U1-216ENST00000556175 ARID4BQ4LE39 1312 aaPredicted RBP35.22■■■■□ 3.23
SDR39U1-216ENST00000556175 MAGI2Q86UL8 1455 aa35.2■■■■□ 3.23
SDR39U1-216ENST00000556175 BCORL1Q5H9F3 1711 aa35.2■■■■□ 3.23
SDR39U1-216ENST00000556175 CCDC18Q5T9S5 1454 aa35.19■■■■□ 3.22
SDR39U1-216ENST00000556175 CASKIN1Q8WXD9 1431 aa35.19■■■■□ 3.22
SDR39U1-216ENST00000556175 LRRIQ1Q96JM4 1722 aa35.19■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms