RNA–Protein interactions for RNA: ENST00000555868.1

TMEM30B-202, Transcript of transmembrane protein 30B, humanhuman

APPRIS P1 BASIC

Gene TMEM30B, Length 4,471 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30B-202ENST00000555868 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
TMEM30B-202ENST00000555868 TRIM52Q96A61 297 aa20.41■□□□□ 0.86
TMEM30B-202ENST00000555868 MTUS2Q5JR59 1369 aa20.4■□□□□ 0.86
TMEM30B-202ENST00000555868 CLSPNQ9HAW4 1339 aa20.4■□□□□ 0.86
TMEM30B-202ENST00000555868 FGD5Q6ZNL6 1462 aa20.39■□□□□ 0.86
TMEM30B-202ENST00000555868 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
TMEM30B-202ENST00000555868 TOP2BQ02880 1626 aa20.38■□□□□ 0.85
TMEM30B-202ENST00000555868 CHMP7Q8WUX9 453 aaPredicted RBP20.38■□□□□ 0.85
TMEM30B-202ENST00000555868 ANP32CO43423 234 aa20.37■□□□□ 0.85
TMEM30B-202ENST00000555868 ANP32AP39687 249 aaKnown RBP20.36■□□□□ 0.85
TMEM30B-202ENST00000555868 NPM2Q86SE8 214 aaKnown RBP20.36■□□□□ 0.85
TMEM30B-202ENST00000555868 ERCC6Q03468 1493 aa20.35■□□□□ 0.85
TMEM30B-202ENST00000555868 IGF1RP08069 1367 aa20.35■□□□□ 0.85
TMEM30B-202ENST00000555868 CUX1P39880 1505 aa20.35■□□□□ 0.85
TMEM30B-202ENST00000555868 NPM1P06748 294 aaKnown RBP eCLIP20.33■□□□□ 0.85
TMEM30B-202ENST00000555868 FHAD1B1AJZ9 1412 aa20.33■□□□□ 0.84
TMEM30B-202ENST00000555868 KIF21BO75037 1637 aa20.33■□□□□ 0.84
TMEM30B-202ENST00000555868 NESP48681 1621 aa20.29■□□□□ 0.84
TMEM30B-202ENST00000555868 RAD54L2Q9Y4B4 1467 aa20.28■□□□□ 0.84
TMEM30B-202ENST00000555868 CCNB3Q8WWL7 1395 aa20.25■□□□□ 0.83
TMEM30B-202ENST00000555868 PLPPR3Q6T4P5 718 aa20.24■□□□□ 0.83
TMEM30B-202ENST00000555868 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
TMEM30B-202ENST00000555868 RTN4Q9NQC3 1192 aaKnown RBP20.22■□□□□ 0.83
TMEM30B-202ENST00000555868 PRXQ9BXM0 1461 aa20.22■□□□□ 0.83
TMEM30B-202ENST00000555868 CHIC2Q9UKJ5 165 aa20.21■□□□□ 0.83
TMEM30B-202ENST00000555868 ERICH3Q5RHP9 1530 aa20.19■□□□□ 0.82
TMEM30B-202ENST00000555868 GLIPR1L2Q4G1C9 344 aa20.19■□□□□ 0.82
TMEM30B-202ENST00000555868 IRX6P78412 446 aaPredicted RBP20.18■□□□□ 0.82
TMEM30B-202ENST00000555868 FHOD3Q2V2M9 1422 aa20.18■□□□□ 0.82
TMEM30B-202ENST00000555868 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
TMEM30B-202ENST00000555868 SLC4A1APQ9BWU0 796 aaKnown RBP20.13■□□□□ 0.81
TMEM30B-202ENST00000555868 DDX10Q13206 875 aaKnown RBP20.12■□□□□ 0.81
TMEM30B-202ENST00000555868 SUPT16HQ9Y5B9 1047 aaKnown RBP20.12■□□□□ 0.81
TMEM30B-202ENST00000555868 ZBTB47Q9UFB7 747 aaPredicted RBP20.12■□□□□ 0.81
TMEM30B-202ENST00000555868 TOPBP1Q92547 1522 aa20.11■□□□□ 0.81
TMEM30B-202ENST00000555868 FMN1Q68DA7 1419 aa20.11■□□□□ 0.81
TMEM30B-202ENST00000555868 GAPVD1Q14C86 1478 aa20.1■□□□□ 0.81
TMEM30B-202ENST00000555868 HNRNPUQ00839 825 aaKnown RBP eCLIP20.1■□□□□ 0.81
TMEM30B-202ENST00000555868 POLA1P09884 1462 aaPredicted RBP20.08■□□□□ 0.81
TMEM30B-202ENST00000555868 ARAP1Q96P48 1450 aa20.08■□□□□ 0.8
TMEM30B-202ENST00000555868 RRP7BPQ9NSQ0 103 aa20.08■□□□□ 0.8
TMEM30B-202ENST00000555868 BIVM-ERCC5R4GMW8 1640 aa20.07■□□□□ 0.8
TMEM30B-202ENST00000555868 ESF1Q9H501 851 aaKnown RBP20.06■□□□□ 0.8
TMEM30B-202ENST00000555868 TONSLQ96HA7 1378 aa20.06■□□□□ 0.8
TMEM30B-202ENST00000555868 ARHGAP35Q9NRY4 1499 aa20.03■□□□□ 0.8
TMEM30B-202ENST00000555868 DNMBPQ6XZF7 1577 aa20.03■□□□□ 0.8
TMEM30B-202ENST00000555868 ZNF326Q5BKZ1 582 aaKnown RBP19.99■□□□□ 0.79
TMEM30B-202ENST00000555868 ARXQ96QS3 562 aa19.99■□□□□ 0.79
TMEM30B-202ENST00000555868 PLEKHD1A6NEE1 506 aa19.98■□□□□ 0.79
TMEM30B-202ENST00000555868 AQRO60306 1485 aaKnown RBP eCLIP19.96■□□□□ 0.79
TMEM30B-202ENST00000555868 DEKP35659 375 aaKnown RBP19.96■□□□□ 0.79
TMEM30B-202ENST00000555868 LAMC3Q9Y6N6 1575 aa19.96■□□□□ 0.79
TMEM30B-202ENST00000555868 SETD5Q9C0A6 1442 aa19.95■□□□□ 0.78
TMEM30B-202ENST00000555868 SIN3AQ96ST3 1273 aa19.93■□□□□ 0.78
TMEM30B-202ENST00000555868 RAB3GAP2Q9H2M9 1393 aa19.93■□□□□ 0.78
TMEM30B-202ENST00000555868 TSHZ2Q9NRE2 1034 aa19.93■□□□□ 0.78
TMEM30B-202ENST00000555868 CFDP1Q9UEE9 299 aaPredicted RBP19.93■□□□□ 0.78
TMEM30B-202ENST00000555868 ABCA10Q8WWZ4 1543 aa19.93■□□□□ 0.78
TMEM30B-202ENST00000555868 RBM19Q9Y4C8 960 aaKnown RBP19.92■□□□□ 0.78
TMEM30B-202ENST00000555868 KCNH8Q96L42 1107 aa19.91■□□□□ 0.78
TMEM30B-202ENST00000555868 CCDC136Q96JN2 1154 aa19.9■□□□□ 0.78
TMEM30B-202ENST00000555868 TSPY4P0CV99 314 aa19.89■□□□□ 0.78
TMEM30B-202ENST00000555868 TSPY10P0CW01 314 aa19.89■□□□□ 0.78
TMEM30B-202ENST00000555868 FAM9BQ8IZU0 186 aa19.88■□□□□ 0.77
TMEM30B-202ENST00000555868 MRC2Q9UBG0 1479 aa19.87■□□□□ 0.77
TMEM30B-202ENST00000555868 TRHP20396 242 aaPredicted RBP19.87■□□□□ 0.77
TMEM30B-202ENST00000555868 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.86■□□□□ 0.77
TMEM30B-202ENST00000555868 URB2Q14146 1524 aaKnown RBP19.85■□□□□ 0.77
TMEM30B-202ENST00000555868 HIRIP3Q9BW71 556 aaPredicted RBP19.84■□□□□ 0.77
TMEM30B-202ENST00000555868 CARMIL2Q6F5E8 1435 aa19.84■□□□□ 0.77
TMEM30B-202ENST00000555868 DHX57Q6P158 1386 aaKnown RBP19.83■□□□□ 0.77
TMEM30B-202ENST00000555868 LRRC9Q6ZRR7 1453 aa19.83■□□□□ 0.76
TMEM30B-202ENST00000555868 PHLDB1Q86UU1 1377 aa19.81■□□□□ 0.76
TMEM30B-202ENST00000555868 GRIN2BQ13224 1484 aa19.81■□□□□ 0.76
TMEM30B-202ENST00000555868 JPH4Q96JJ6 628 aa19.81■□□□□ 0.76
TMEM30B-202ENST00000555868 CASKIN1Q8WXD9 1431 aa19.8■□□□□ 0.76
TMEM30B-202ENST00000555868 CHGAP10645 457 aaKnown RBP19.79■□□□□ 0.76
TMEM30B-202ENST00000555868 STAG3Q9UJ98 1225 aa19.78■□□□□ 0.76
TMEM30B-202ENST00000555868 NEFMP07197 916 aa19.77■□□□□ 0.76
TMEM30B-202ENST00000555868 EFCAB5A4FU69 1503 aa19.75■□□□□ 0.75
TMEM30B-202ENST00000555868 RRBP1Q9P2E9 1410 aaKnown RBP19.75■□□□□ 0.75
TMEM30B-202ENST00000555868 IFT140Q96RY7 1462 aa19.74■□□□□ 0.75
TMEM30B-202ENST00000555868 FYCO1Q9BQS8 1478 aa19.73■□□□□ 0.75
TMEM30B-202ENST00000555868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.73■□□□□ 0.75
TMEM30B-202ENST00000555868 LAS1LQ9Y4W2 734 aaKnown RBP19.73■□□□□ 0.75
TMEM30B-202ENST00000555868 SALL2Q9Y467 1007 aaPredicted RBP19.72■□□□□ 0.75
TMEM30B-202ENST00000555868 NOP58Q9Y2X3 529 aaKnown RBP19.72■□□□□ 0.75
TMEM30B-202ENST00000555868 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
TMEM30B-202ENST00000555868 CCDC18Q5T9S5 1454 aa19.7■□□□□ 0.74
TMEM30B-202ENST00000555868 CUL7Q14999 1698 aa19.69■□□□□ 0.74
TMEM30B-202ENST00000555868 TIMELESSQ9UNS1 1208 aa19.68■□□□□ 0.74
TMEM30B-202ENST00000555868 FGD6Q6ZV73 1430 aa19.68■□□□□ 0.74
TMEM30B-202ENST00000555868 ARID4BQ4LE39 1312 aaPredicted RBP19.64■□□□□ 0.73
TMEM30B-202ENST00000555868 EIF4G2P78344 907 aaKnown RBP eCLIP19.63■□□□□ 0.73
TMEM30B-202ENST00000555868 SENP3-EIF4A1A0A087X0R7 540 aa19.62■□□□□ 0.73
TMEM30B-202ENST00000555868 MYOM3Q5VTT5 1437 aa19.62■□□□□ 0.73
TMEM30B-202ENST00000555868 SNAPC4Q5SXM2 1469 aa19.62■□□□□ 0.73
TMEM30B-202ENST00000555868 KDM2AQ9Y2K7 1162 aa19.61■□□□□ 0.73
TMEM30B-202ENST00000555868 NCOA2Q15596 1464 aa19.61■□□□□ 0.73
TMEM30B-202ENST00000555868 PCF11O94913 1555 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms