RNA–Protein interactions for RNA: ENST00000555868.1

TMEM30B-202, Transcript of transmembrane protein 30B, humanhuman

APPRIS P1 BASIC

Gene TMEM30B, Length 4,471 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30B-202ENST00000555868 NISCHQ9Y2I1 1504 aa28.15■■■□□ 2.1
TMEM30B-202ENST00000555868 DCAF8L2P0C7V8 631 aa25.85■■□□□ 1.73
TMEM30B-202ENST00000555868 SHROOM4Q9ULL8 1493 aa24.85■■□□□ 1.57
TMEM30B-202ENST00000555868 SUPT5HO00267 1087 aaKnown RBP24.55■■□□□ 1.52
TMEM30B-202ENST00000555868 CCDC180Q9P1Z9 1646 aa23.71■■□□□ 1.39
TMEM30B-202ENST00000555868 PELP1Q8IZL8 1130 aaKnown RBP23.63■■□□□ 1.37
TMEM30B-202ENST00000555868 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
TMEM30B-202ENST00000555868 PCGF6Q9BYE7 350 aa23.45■■□□□ 1.34
TMEM30B-202ENST00000555868 ABCC9O60706 1549 aa23.35■■□□□ 1.33
TMEM30B-202ENST00000555868 MYT1Q01538 1121 aa23.17■■□□□ 1.3
TMEM30B-202ENST00000555868 EHMT2Q96KQ7 1210 aa23■■□□□ 1.27
TMEM30B-202ENST00000555868 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
TMEM30B-202ENST00000555868 FAM9AQ8IZU1 332 aaPredicted RBP22.87■■□□□ 1.25
TMEM30B-202ENST00000555868 TRIM41Q8WV44 630 aa22.84■■□□□ 1.25
TMEM30B-202ENST00000555868 HRCP23327 699 aa22.83■■□□□ 1.24
TMEM30B-202ENST00000555868 CENPBP07199 599 aaPredicted RBP22.82■■□□□ 1.24
TMEM30B-202ENST00000555868 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
TMEM30B-202ENST00000555868 DCAF1Q9Y4B6 1507 aa22.75■■□□□ 1.23
TMEM30B-202ENST00000555868 PPARGC1BQ86YN6 1023 aaKnown RBP22.66■■□□□ 1.22
TMEM30B-202ENST00000555868 PABPN1Q86U42 306 aaKnown RBP eCLIP22.61■■□□□ 1.21
TMEM30B-202ENST00000555868 ZEB1P37275 1124 aaPredicted RBP22.53■■□□□ 1.2
TMEM30B-202ENST00000555868 YTHDC1Q96MU7 727 aaKnown RBP22.47■■□□□ 1.19
TMEM30B-202ENST00000555868 NACADO15069 1562 aa22.46■■□□□ 1.19
TMEM30B-202ENST00000555868 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.18
TMEM30B-202ENST00000555868 TTBK1Q5TCY1 1321 aaPredicted RBP22.38■■□□□ 1.17
TMEM30B-202ENST00000555868 RB1CC1Q8TDY2 1594 aa22.37■■□□□ 1.17
TMEM30B-202ENST00000555868 ERICH6Q7L0X2 663 aa22.36■■□□□ 1.17
TMEM30B-202ENST00000555868 CCER1Q8TC90 406 aaPredicted RBP22.32■■□□□ 1.16
TMEM30B-202ENST00000555868 RSF1Q96T23 1441 aaPredicted RBP22.27■■□□□ 1.16
TMEM30B-202ENST00000555868 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
TMEM30B-202ENST00000555868 RANGAP1P46060 587 aaPredicted RBP22.14■■□□□ 1.13
TMEM30B-202ENST00000555868 UBTFP17480 764 aaKnown RBP22.12■■□□□ 1.13
TMEM30B-202ENST00000555868 CECR2Q9BXF3 1484 aa22.05■■□□□ 1.12
TMEM30B-202ENST00000555868 TRIM26Q12899 539 aaPredicted RBP22.03■■□□□ 1.12
TMEM30B-202ENST00000555868 APLP2Q06481 763 aa22.01■■□□□ 1.11
TMEM30B-202ENST00000555868 GTF3C3Q9Y5Q9 886 aa21.9■■□□□ 1.1
TMEM30B-202ENST00000555868 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
TMEM30B-202ENST00000555868 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
TMEM30B-202ENST00000555868 BAZ1AQ9NRL2 1556 aaPredicted RBP21.84■■□□□ 1.09
TMEM30B-202ENST00000555868 NEFLP07196 543 aa21.78■■□□□ 1.08
TMEM30B-202ENST00000555868 DIEXFQ68CQ4 756 aaKnown RBP21.65■■□□□ 1.06
TMEM30B-202ENST00000555868 CSRNP3Q8WYN3 585 aa21.6■■□□□ 1.05
TMEM30B-202ENST00000555868 WIZO95785 1651 aa21.59■■□□□ 1.05
TMEM30B-202ENST00000555868 ACIN1Q9UKV3 1341 aaKnown RBP21.56■■□□□ 1.04
TMEM30B-202ENST00000555868 SCAF1Q9H7N4 1312 aaKnown RBP21.52■■□□□ 1.04
TMEM30B-202ENST00000555868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
TMEM30B-202ENST00000555868 BAZ1BQ9UIG0 1483 aaKnown RBP21.51■■□□□ 1.03
TMEM30B-202ENST00000555868 CCDC88BA6NC98 1476 aa21.44■■□□□ 1.02
TMEM30B-202ENST00000555868 SMARCA4P51532 1647 aa21.4■■□□□ 1.02
TMEM30B-202ENST00000555868 TOP2AP11388 1531 aaKnown RBP21.39■■□□□ 1.01
TMEM30B-202ENST00000555868 HNRNPUL2Q1KMD3 747 aaKnown RBP21.36■■□□□ 1.01
TMEM30B-202ENST00000555868 WRNQ14191 1432 aaPredicted RBP eCLIP21.34■■□□□ 1.01
TMEM30B-202ENST00000555868 BCANQ96GW7 911 aa21.32■■□□□ 1
TMEM30B-202ENST00000555868 NEUROD1Q13562 356 aa21.27■□□□□ 0.99
TMEM30B-202ENST00000555868 ABCC8Q09428 1581 aa21.25■□□□□ 0.99
TMEM30B-202ENST00000555868 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
TMEM30B-202ENST00000555868 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
TMEM30B-202ENST00000555868 EEA1Q15075 1411 aa21.21■□□□□ 0.99
TMEM30B-202ENST00000555868 ATAD2BQ9ULI0 1458 aa21.21■□□□□ 0.99
TMEM30B-202ENST00000555868 FBLN2P98095 1184 aa21.2■□□□□ 0.98
TMEM30B-202ENST00000555868 SOGA1O94964 1423 aa21.15■□□□□ 0.98
TMEM30B-202ENST00000555868 ITGAEP38570 1179 aa21.12■□□□□ 0.97
TMEM30B-202ENST00000555868 RTL5Q5HYW3 569 aaPredicted RBP21.11■□□□□ 0.97
TMEM30B-202ENST00000555868 CEP162Q5TB80 1403 aa21.08■□□□□ 0.97
TMEM30B-202ENST00000555868 GOLGA3Q08378 1498 aa21.07■□□□□ 0.96
TMEM30B-202ENST00000555868 TNIKQ9UKE5 1360 aa21.04■□□□□ 0.96
TMEM30B-202ENST00000555868 BICRAQ9NZM4 1560 aa21.01■□□□□ 0.95
TMEM30B-202ENST00000555868 CLIP1P30622 1438 aa20.99■□□□□ 0.95
TMEM30B-202ENST00000555868 CEP164Q9UPV0 1460 aa20.97■□□□□ 0.95
TMEM30B-202ENST00000555868 P3H3Q8IVL6 736 aa20.96■□□□□ 0.95
TMEM30B-202ENST00000555868 DAXXQ9UER7 740 aaPredicted RBP20.94■□□□□ 0.94
TMEM30B-202ENST00000555868 KIF27Q86VH2 1401 aa20.91■□□□□ 0.94
TMEM30B-202ENST00000555868 UNC13AQ9UPW8 1703 aa20.9■□□□□ 0.94
TMEM30B-202ENST00000555868 ZNF316A6NFI3 1004 aaPredicted RBP20.9■□□□□ 0.94
TMEM30B-202ENST00000555868 EIF4G1Q04637 1599 aaKnown RBP20.83■□□□□ 0.93
TMEM30B-202ENST00000555868 RUSC2Q8N2Y8 1516 aa20.83■□□□□ 0.93
TMEM30B-202ENST00000555868 FAM50AQ14320 339 aaKnown RBP20.83■□□□□ 0.93
TMEM30B-202ENST00000555868 EIF5BO60841 1220 aaKnown RBP20.82■□□□□ 0.92
TMEM30B-202ENST00000555868 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
TMEM30B-202ENST00000555868 CNGB1Q14028 1251 aaPredicted RBP20.81■□□□□ 0.92
TMEM30B-202ENST00000555868 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.92
TMEM30B-202ENST00000555868 CDK11AQ9UQ88 783 aaPredicted RBP20.76■□□□□ 0.91
TMEM30B-202ENST00000555868 BCL11AQ9H165 835 aa20.75■□□□□ 0.91
TMEM30B-202ENST00000555868 CUX2O14529 1486 aa20.73■□□□□ 0.91
TMEM30B-202ENST00000555868 ANP32EQ9BTT0 268 aa20.67■□□□□ 0.9
TMEM30B-202ENST00000555868 FKBP8Q14318 412 aa20.64■□□□□ 0.9
TMEM30B-202ENST00000555868 ARID3CA6NKF2 412 aa20.63■□□□□ 0.89
TMEM30B-202ENST00000555868 CARMIL1Q5VZK9 1371 aa20.62■□□□□ 0.89
TMEM30B-202ENST00000555868 RAPGEF2Q9Y4G8 1499 aa20.62■□□□□ 0.89
TMEM30B-202ENST00000555868 POLR3GLQ9BT43 218 aa20.61■□□□□ 0.89
TMEM30B-202ENST00000555868 PEG3Q9GZU2 1588 aa20.61■□□□□ 0.89
TMEM30B-202ENST00000555868 HMGXB3Q12766 1538 aa20.58■□□□□ 0.89
TMEM30B-202ENST00000555868 SYNJ1O43426 1573 aa20.58■□□□□ 0.88
TMEM30B-202ENST00000555868 VPS8Q8N3P4 1428 aa20.58■□□□□ 0.88
TMEM30B-202ENST00000555868 CFTRP13569 1480 aa20.52■□□□□ 0.87
TMEM30B-202ENST00000555868 NBR1Q14596 966 aa20.51■□□□□ 0.87
TMEM30B-202ENST00000555868 FANCD2Q9BXW9 1451 aa20.51■□□□□ 0.87
TMEM30B-202ENST00000555868 PDS5BQ9NTI5 1447 aa20.51■□□□□ 0.87
TMEM30B-202ENST00000555868 MIER1Q8N108 512 aa20.51■□□□□ 0.87
TMEM30B-202ENST00000555868 CC2D2AQ9P2K1 1620 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms