RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 CARMIL1Q5VZK9 1371 aa23.35■■□□□ 1.33
SNX6-203ENST00000555416 SHROOM2Q13796 1616 aa23.33■■□□□ 1.33
SNX6-203ENST00000555416 JPH4Q96JJ6 628 aa23.26■■□□□ 1.31
SNX6-203ENST00000555416 PRG4Q92954 1404 aaPredicted RBP23.24■■□□□ 1.31
SNX6-203ENST00000555416 KIAA0586Q9BVV6 1533 aa23.23■■□□□ 1.31
SNX6-203ENST00000555416 RAPGEF2Q9Y4G8 1499 aa23.17■■□□□ 1.3
SNX6-203ENST00000555416 PRXQ9BXM0 1461 aa23.1■■□□□ 1.29
SNX6-203ENST00000555416 IQGAP2Q13576 1575 aa23.07■■□□□ 1.28
SNX6-203ENST00000555416 CSRNP3Q8WYN3 585 aa23.03■■□□□ 1.28
SNX6-203ENST00000555416 FAM9AQ8IZU1 332 aaPredicted RBP22.99■■□□□ 1.27
SNX6-203ENST00000555416 DISP1Q96F81 1524 aa22.98■■□□□ 1.27
SNX6-203ENST00000555416 TRHP20396 242 aaPredicted RBP22.97■■□□□ 1.27
SNX6-203ENST00000555416 UGGT2Q9NYU1 1516 aa22.96■■□□□ 1.27
SNX6-203ENST00000555416 EEA1Q15075 1411 aa22.95■■□□□ 1.26
SNX6-203ENST00000555416 CTTNBP2Q8WZ74 1663 aa22.95■■□□□ 1.26
SNX6-203ENST00000555416 TTBK1Q5TCY1 1321 aaPredicted RBP22.94■■□□□ 1.26
SNX6-203ENST00000555416 CARMIL2Q6F5E8 1435 aa22.93■■□□□ 1.26
SNX6-203ENST00000555416 PTPRGP23470 1445 aa22.92■■□□□ 1.26
SNX6-203ENST00000555416 ADCY10Q96PN6 1610 aa22.92■■□□□ 1.26
SNX6-203ENST00000555416 TNIKQ9UKE5 1360 aa22.91■■□□□ 1.26
SNX6-203ENST00000555416 KIAA0556O60303 1618 aa22.87■■□□□ 1.25
SNX6-203ENST00000555416 KIF21BO75037 1637 aa22.78■■□□□ 1.24
SNX6-203ENST00000555416 UACAQ9BZF9 1416 aa22.76■■□□□ 1.23
SNX6-203ENST00000555416 GOLGA3Q08378 1498 aa22.75■■□□□ 1.23
SNX6-203ENST00000555416 NPM1P06748 294 aaKnown RBP eCLIP22.75■■□□□ 1.23
SNX6-203ENST00000555416 EHMT2Q96KQ7 1210 aa22.75■■□□□ 1.23
SNX6-203ENST00000555416 MAPKBP1O60336 1514 aa22.74■■□□□ 1.23
SNX6-203ENST00000555416 UHRF1BP1LA0JNW5 1464 aa22.73■■□□□ 1.23
SNX6-203ENST00000555416 ABCC2Q92887 1545 aa22.73■■□□□ 1.23
SNX6-203ENST00000555416 P3H3Q8IVL6 736 aa22.72■■□□□ 1.23
SNX6-203ENST00000555416 KIF13AQ9H1H9 1805 aa22.71■■□□□ 1.23
SNX6-203ENST00000555416 PLB1Q6P1J6 1458 aa22.71■■□□□ 1.23
SNX6-203ENST00000555416 RANGAP1P46060 587 aaPredicted RBP22.69■■□□□ 1.22
SNX6-203ENST00000555416 SAMD9Q5K651 1589 aa22.67■■□□□ 1.22
SNX6-203ENST00000555416 ABCC10Q5T3U5 1492 aa22.67■■□□□ 1.22
SNX6-203ENST00000555416 ABCA8O94911 1581 aa22.65■■□□□ 1.22
SNX6-203ENST00000555416 KDM5BQ9UGL1 1544 aa22.65■■□□□ 1.22
SNX6-203ENST00000555416 DIP2BQ9P265 1576 aa22.64■■□□□ 1.22
SNX6-203ENST00000555416 FAM69CQ0P6D2 419 aa22.64■■□□□ 1.21
SNX6-203ENST00000555416 ASXL2Q76L83 1435 aa22.63■■□□□ 1.21
SNX6-203ENST00000555416 ZCCHC11Q5TAX3 1644 aaKnown RBP22.6■■□□□ 1.21
SNX6-203ENST00000555416 UBTFP17480 764 aaKnown RBP22.6■■□□□ 1.21
SNX6-203ENST00000555416 FHOD3Q2V2M9 1422 aa22.58■■□□□ 1.21
SNX6-203ENST00000555416 ARID3CA6NKF2 412 aa22.53■■□□□ 1.2
SNX6-203ENST00000555416 EFCAB5A4FU69 1503 aa22.5■■□□□ 1.19
SNX6-203ENST00000555416 EPRSP07814 1512 aaKnown RBP22.48■■□□□ 1.19
SNX6-203ENST00000555416 ATP10BO94823 1461 aa22.47■■□□□ 1.19
SNX6-203ENST00000555416 RAPGEF6Q8TEU7 1601 aa22.47■■□□□ 1.19
SNX6-203ENST00000555416 TSPOAP1O95153 1857 aa22.47■■□□□ 1.19
SNX6-203ENST00000555416 WDR7Q9Y4E6 1490 aa22.47■■□□□ 1.19
SNX6-203ENST00000555416 GLI2P10070 1586 aa22.46■■□□□ 1.19
SNX6-203ENST00000555416 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
SNX6-203ENST00000555416 NUP153P49790 1475 aaKnown RBP22.44■■□□□ 1.18
SNX6-203ENST00000555416 PPRC1Q5VV67 1664 aaKnown RBP22.42■■□□□ 1.18
SNX6-203ENST00000555416 KCNH8Q96L42 1107 aa22.39■■□□□ 1.17
SNX6-203ENST00000555416 MAP3K4Q9Y6R4 1608 aa22.38■■□□□ 1.17
SNX6-203ENST00000555416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.31■■□□□ 1.16
SNX6-203ENST00000555416 HNRNPUL2Q1KMD3 747 aaKnown RBP22.31■■□□□ 1.16
SNX6-203ENST00000555416 KDM6BO15054 1643 aa22.29■■□□□ 1.16
SNX6-203ENST00000555416 CDK13Q14004 1512 aaKnown RBP22.29■■□□□ 1.16
SNX6-203ENST00000555416 FMN1Q68DA7 1419 aa22.29■■□□□ 1.16
SNX6-203ENST00000555416 CD109Q6YHK3 1445 aa22.27■■□□□ 1.16
SNX6-203ENST00000555416 COL17A1Q9UMD9 1497 aaPredicted RBP22.26■■□□□ 1.15
SNX6-203ENST00000555416 CFAP43Q8NDM7 1665 aa22.25■■□□□ 1.15
SNX6-203ENST00000555416 CLIP1P30622 1438 aa22.24■■□□□ 1.15
SNX6-203ENST00000555416 ATP1B4Q9UN42 357 aaPredicted RBP22.24■■□□□ 1.15
SNX6-203ENST00000555416 MAGI3Q5TCQ9 1506 aa22.22■■□□□ 1.15
SNX6-203ENST00000555416 LOC105371045A0A1W2PR82 267 aa22.22■■□□□ 1.15
SNX6-203ENST00000555416 TEX14Q8IWB6 1497 aa22.22■■□□□ 1.15
SNX6-203ENST00000555416 HECW1Q76N89 1606 aa22.21■■□□□ 1.15
SNX6-203ENST00000555416 ABCA9Q8IUA7 1624 aa22.21■■□□□ 1.15
SNX6-203ENST00000555416 PLEKHD1A6NEE1 506 aa22.2■■□□□ 1.14
SNX6-203ENST00000555416 LRRIQ1Q96JM4 1722 aa22.2■■□□□ 1.14
SNX6-203ENST00000555416 PCF11O94913 1555 aaKnown RBP22.18■■□□□ 1.14
SNX6-203ENST00000555416 CASKIN1Q8WXD9 1431 aa22.14■■□□□ 1.14
SNX6-203ENST00000555416 CEP162Q5TB80 1403 aa22.13■■□□□ 1.13
SNX6-203ENST00000555416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.12■■□□□ 1.13
SNX6-203ENST00000555416 TTC37Q6PGP7 1564 aa22.11■■□□□ 1.13
SNX6-203ENST00000555416 FYCO1Q9BQS8 1478 aa22.07■■□□□ 1.12
SNX6-203ENST00000555416 KIF14Q15058 1648 aa22.06■■□□□ 1.12
SNX6-203ENST00000555416 TROQ12816 1431 aaPredicted RBP22.05■■□□□ 1.12
SNX6-203ENST00000555416 ARAP3Q8WWN8 1544 aa22.04■■□□□ 1.12
SNX6-203ENST00000555416 CCDC18Q5T9S5 1454 aa22.03■■□□□ 1.12
SNX6-203ENST00000555416 CDK11AQ9UQ88 783 aaPredicted RBP22.02■■□□□ 1.12
SNX6-203ENST00000555416 NEO1Q92859 1461 aa22.02■■□□□ 1.12
SNX6-203ENST00000555416 FANCAO15360 1455 aa21.98■■□□□ 1.11
SNX6-203ENST00000555416 RAPGEF3O95398 923 aa21.98■■□□□ 1.11
SNX6-203ENST00000555416 PHLDB1Q86UU1 1377 aa21.98■■□□□ 1.11
SNX6-203ENST00000555416 PLCH2O75038 1416 aa21.97■■□□□ 1.11
SNX6-203ENST00000555416 FRMPD1Q5SYB0 1578 aa21.96■■□□□ 1.11
SNX6-203ENST00000555416 AKNAQ7Z591 1439 aa21.96■■□□□ 1.11
SNX6-203ENST00000555416 KDM4FA0A1W2PPD8 638 aa21.93■■□□□ 1.1
SNX6-203ENST00000555416 MYO5CQ9NQX4 1742 aa21.92■■□□□ 1.1
SNX6-203ENST00000555416 CFAP74Q9C0B2 1584 aa21.9■■□□□ 1.1
SNX6-203ENST00000555416 DENND4BO75064 1496 aaPredicted RBP21.88■■□□□ 1.09
SNX6-203ENST00000555416 RICTORQ6R327 1708 aa21.87■■□□□ 1.09
SNX6-203ENST00000555416 EFCAB2Q5VUJ9 269 aa21.86■■□□□ 1.09
SNX6-203ENST00000555416 CDC42BPBQ9Y5S2 1711 aa21.86■■□□□ 1.09
SNX6-203ENST00000555416 ADGRL1O94910 1474 aa21.85■■□□□ 1.09
SNX6-203ENST00000555416 SCAPERQ9BY12 1400 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms