RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 KIAA0586Q9BVV6 1533 aa34.22■■■■□ 3.07
FOXN3-209ENST00000555353 CSRNP3Q8WYN3 585 aa34.2■■■■□ 3.07
FOXN3-209ENST00000555353 ARAP1Q96P48 1450 aa34.18■■■■□ 3.06
FOXN3-209ENST00000555353 JPH4Q96JJ6 628 aa34.18■■■■□ 3.06
FOXN3-209ENST00000555353 PRXQ9BXM0 1461 aa34.18■■■■□ 3.06
FOXN3-209ENST00000555353 CYB5RLQ6IPT4 315 aa34.16■■■■□ 3.06
FOXN3-209ENST00000555353 FAM9AQ8IZU1 332 aaPredicted RBP34.15■■■■□ 3.06
FOXN3-209ENST00000555353 ERCC6L2Q5T890 1561 aa34.11■■■■□ 3.05
FOXN3-209ENST00000555353 PRG4Q92954 1404 aaPredicted RBP34.11■■■■□ 3.05
FOXN3-209ENST00000555353 IQGAP2Q13576 1575 aa34.07■■■■□ 3.04
FOXN3-209ENST00000555353 CTTNBP2Q8WZ74 1663 aa34.01■■■■□ 3.04
FOXN3-209ENST00000555353 KIF21BO75037 1637 aa33.91■■■■□ 3.02
FOXN3-209ENST00000555353 CARMIL2Q6F5E8 1435 aa33.89■■■■□ 3.02
FOXN3-209ENST00000555353 UGGT2Q9NYU1 1516 aa33.86■■■■□ 3.01
FOXN3-209ENST00000555353 DISP1Q96F81 1524 aa33.78■■■■□ 3
FOXN3-209ENST00000555353 TNIKQ9UKE5 1360 aa33.74■■■□□ 2.99
FOXN3-209ENST00000555353 KIAA0556O60303 1618 aa33.73■■■□□ 2.99
FOXN3-209ENST00000555353 PTPRGP23470 1445 aa33.72■■■□□ 2.99
FOXN3-209ENST00000555353 GOLGA3Q08378 1498 aa33.71■■■□□ 2.99
FOXN3-209ENST00000555353 EHMT2Q96KQ7 1210 aa33.71■■■□□ 2.99
FOXN3-209ENST00000555353 TTBK1Q5TCY1 1321 aaPredicted RBP33.71■■■□□ 2.99
FOXN3-209ENST00000555353 UBTFP17480 764 aaKnown RBP33.65■■■□□ 2.98
FOXN3-209ENST00000555353 ADCY10Q96PN6 1610 aa33.57■■■□□ 2.97
FOXN3-209ENST00000555353 RANGAP1P46060 587 aaPredicted RBP33.56■■■□□ 2.96
FOXN3-209ENST00000555353 SAMD9Q5K651 1589 aa33.53■■■□□ 2.96
FOXN3-209ENST00000555353 NPM1P06748 294 aaKnown RBP eCLIP33.51■■■□□ 2.96
FOXN3-209ENST00000555353 P3H3Q8IVL6 736 aa33.5■■■□□ 2.95
FOXN3-209ENST00000555353 UACAQ9BZF9 1416 aa33.49■■■□□ 2.95
FOXN3-209ENST00000555353 TRHP20396 242 aaPredicted RBP33.47■■■□□ 2.95
FOXN3-209ENST00000555353 UHRF1BP1LA0JNW5 1464 aa33.44■■■□□ 2.94
FOXN3-209ENST00000555353 ABCC2Q92887 1545 aa33.43■■■□□ 2.94
FOXN3-209ENST00000555353 EFCAB5A4FU69 1503 aa33.43■■■□□ 2.94
FOXN3-209ENST00000555353 PLB1Q6P1J6 1458 aa33.38■■■□□ 2.93
FOXN3-209ENST00000555353 FHOD3Q2V2M9 1422 aa33.35■■■□□ 2.93
FOXN3-209ENST00000555353 MAPKBP1O60336 1514 aa33.34■■■□□ 2.93
FOXN3-209ENST00000555353 ABCA8O94911 1581 aa33.34■■■□□ 2.93
FOXN3-209ENST00000555353 KDM5BQ9UGL1 1544 aa33.28■■■□□ 2.92
FOXN3-209ENST00000555353 ARHGAP35Q9NRY4 1499 aa33.25■■■□□ 2.91
FOXN3-209ENST00000555353 ZCCHC11Q5TAX3 1644 aaKnown RBP33.24■■■□□ 2.91
FOXN3-209ENST00000555353 RAPGEF6Q8TEU7 1601 aa33.22■■■□□ 2.91
FOXN3-209ENST00000555353 ASXL2Q76L83 1435 aa33.18■■■□□ 2.9
FOXN3-209ENST00000555353 KIF13AQ9H1H9 1805 aa33.18■■■□□ 2.9
FOXN3-209ENST00000555353 ABCC10Q5T3U5 1492 aa33.17■■■□□ 2.9
FOXN3-209ENST00000555353 DIP2BQ9P265 1576 aa33.13■■■□□ 2.89
FOXN3-209ENST00000555353 FMN1Q68DA7 1419 aa33.12■■■□□ 2.89
FOXN3-209ENST00000555353 FAM69CQ0P6D2 419 aa33.12■■■□□ 2.89
FOXN3-209ENST00000555353 ARID3CA6NKF2 412 aa33.11■■■□□ 2.89
FOXN3-209ENST00000555353 CLIP1P30622 1438 aa33.11■■■□□ 2.89
FOXN3-209ENST00000555353 LOC105371045A0A1W2PR82 267 aa33.08■■■□□ 2.89
FOXN3-209ENST00000555353 ATP10BO94823 1461 aa33.06■■■□□ 2.88
FOXN3-209ENST00000555353 NUP153P49790 1475 aaKnown RBP33.06■■■□□ 2.88
FOXN3-209ENST00000555353 WDR7Q9Y4E6 1490 aa33.04■■■□□ 2.88
FOXN3-209ENST00000555353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.01■■■□□ 2.88
FOXN3-209ENST00000555353 HNRNPUL2Q1KMD3 747 aaKnown RBP33.01■■■□□ 2.88
FOXN3-209ENST00000555353 CEP162Q5TB80 1403 aa32.99■■■□□ 2.87
FOXN3-209ENST00000555353 EPRSP07814 1512 aaKnown RBP32.97■■■□□ 2.87
FOXN3-209ENST00000555353 ATP1B4Q9UN42 357 aaPredicted RBP32.96■■■□□ 2.87
FOXN3-209ENST00000555353 HECW1Q76N89 1606 aa32.96■■■□□ 2.87
FOXN3-209ENST00000555353 GLI2P10070 1586 aa32.96■■■□□ 2.87
FOXN3-209ENST00000555353 TSPOAP1O95153 1857 aa32.92■■■□□ 2.86
FOXN3-209ENST00000555353 KCNH8Q96L42 1107 aa32.91■■■□□ 2.86
FOXN3-209ENST00000555353 PCF11O94913 1555 aaKnown RBP32.86■■■□□ 2.85
FOXN3-209ENST00000555353 CDK13Q14004 1512 aaKnown RBP32.85■■■□□ 2.85
FOXN3-209ENST00000555353 CASKIN1Q8WXD9 1431 aa32.85■■■□□ 2.85
FOXN3-209ENST00000555353 PLEKHD1A6NEE1 506 aa32.83■■■□□ 2.85
FOXN3-209ENST00000555353 MAP3K4Q9Y6R4 1608 aa32.83■■■□□ 2.85
FOXN3-209ENST00000555353 FYCO1Q9BQS8 1478 aa32.79■■■□□ 2.84
FOXN3-209ENST00000555353 LRRIQ1Q96JM4 1722 aa32.77■■■□□ 2.84
FOXN3-209ENST00000555353 CFAP43Q8NDM7 1665 aa32.77■■■□□ 2.84
FOXN3-209ENST00000555353 CDK11AQ9UQ88 783 aaPredicted RBP32.75■■■□□ 2.83
FOXN3-209ENST00000555353 PPRC1Q5VV67 1664 aaKnown RBP32.74■■■□□ 2.83
FOXN3-209ENST00000555353 CCDC18Q5T9S5 1454 aa32.73■■■□□ 2.83
FOXN3-209ENST00000555353 CD109Q6YHK3 1445 aa32.72■■■□□ 2.83
FOXN3-209ENST00000555353 ABCA9Q8IUA7 1624 aa32.7■■■□□ 2.83
FOXN3-209ENST00000555353 TEX14Q8IWB6 1497 aa32.69■■■□□ 2.82
FOXN3-209ENST00000555353 MAGI3Q5TCQ9 1506 aa32.63■■■□□ 2.81
FOXN3-209ENST00000555353 TROQ12816 1431 aaPredicted RBP32.6■■■□□ 2.81
FOXN3-209ENST00000555353 KDM6BO15054 1643 aa32.6■■■□□ 2.81
FOXN3-209ENST00000555353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.58■■■□□ 2.81
FOXN3-209ENST00000555353 VPS8Q8N3P4 1428 aa32.57■■■□□ 2.8
FOXN3-209ENST00000555353 KIF14Q15058 1648 aa32.55■■■□□ 2.8
FOXN3-209ENST00000555353 TTC37Q6PGP7 1564 aa32.54■■■□□ 2.8
FOXN3-209ENST00000555353 MYO5CQ9NQX4 1742 aa32.43■■■□□ 2.78
FOXN3-209ENST00000555353 MTUS2Q5JR59 1369 aa32.42■■■□□ 2.78
FOXN3-209ENST00000555353 NEO1Q92859 1461 aa32.42■■■□□ 2.78
FOXN3-209ENST00000555353 PHLDB1Q86UU1 1377 aa32.41■■■□□ 2.78
FOXN3-209ENST00000555353 COL17A1Q9UMD9 1497 aaPredicted RBP32.41■■■□□ 2.78
FOXN3-209ENST00000555353 CFAP74Q9C0B2 1584 aa32.39■■■□□ 2.78
FOXN3-209ENST00000555353 FANCAO15360 1455 aa32.38■■■□□ 2.77
FOXN3-209ENST00000555353 PLCH2O75038 1416 aa32.38■■■□□ 2.77
FOXN3-209ENST00000555353 TIAM1Q13009 1591 aa32.36■■■□□ 2.77
FOXN3-209ENST00000555353 ARAP3Q8WWN8 1544 aa32.35■■■□□ 2.77
FOXN3-209ENST00000555353 EHBP1L1Q8N3D4 1523 aa32.35■■■□□ 2.77
FOXN3-209ENST00000555353 AKNAQ7Z591 1439 aa32.3■■■□□ 2.76
FOXN3-209ENST00000555353 ARHGAP5Q13017 1502 aa32.29■■■□□ 2.76
FOXN3-209ENST00000555353 EFCAB2Q5VUJ9 269 aa32.28■■■□□ 2.76
FOXN3-209ENST00000555353 PREX2Q70Z35 1606 aa32.27■■■□□ 2.76
FOXN3-209ENST00000555353 MAP3K1Q13233 1512 aa32.27■■■□□ 2.76
FOXN3-209ENST00000555353 APLP2Q06481 763 aa32.27■■■□□ 2.76
FOXN3-209ENST00000555353 CDC42BPAQ5VT25 1732 aa32.26■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms