RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 IGF1RP08069 1367 aa15.68■□□□□ 0.1
AC004828.1-201ENST00000555303 KIAA0586Q9BVV6 1533 aa15.67■□□□□ 0.1
AC004828.1-201ENST00000555303 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
AC004828.1-201ENST00000555303 CARMIL1Q5VZK9 1371 aa15.6■□□□□ 0.09
AC004828.1-201ENST00000555303 KIF13AQ9H1H9 1805 aa15.59■□□□□ 0.09
AC004828.1-201ENST00000555303 MAPKBP1O60336 1514 aa15.57■□□□□ 0.08
AC004828.1-201ENST00000555303 IQGAP2Q13576 1575 aa15.56■□□□□ 0.08
AC004828.1-201ENST00000555303 ADCY10Q96PN6 1610 aa15.56■□□□□ 0.08
AC004828.1-201ENST00000555303 CARMIL2Q6F5E8 1435 aa15.51■□□□□ 0.07
AC004828.1-201ENST00000555303 RAPGEF2Q9Y4G8 1499 aa15.51■□□□□ 0.07
AC004828.1-201ENST00000555303 ABCC10Q5T3U5 1492 aa15.49■□□□□ 0.07
AC004828.1-201ENST00000555303 DIP2BQ9P265 1576 aa15.49■□□□□ 0.07
AC004828.1-201ENST00000555303 NPM1P06748 294 aaKnown RBP eCLIP15.48■□□□□ 0.07
AC004828.1-201ENST00000555303 CTTNBP2Q8WZ74 1663 aa15.47■□□□□ 0.07
AC004828.1-201ENST00000555303 TNIKQ9UKE5 1360 aa15.47■□□□□ 0.07
AC004828.1-201ENST00000555303 PTPRGP23470 1445 aa15.46■□□□□ 0.07
AC004828.1-201ENST00000555303 UGGT2Q9NYU1 1516 aa15.46■□□□□ 0.07
AC004828.1-201ENST00000555303 DISP1Q96F81 1524 aa15.43■□□□□ 0.06
AC004828.1-201ENST00000555303 ABCC2Q92887 1545 aa15.43■□□□□ 0.06
AC004828.1-201ENST00000555303 UHRF1BP1LA0JNW5 1464 aa15.42■□□□□ 0.06
AC004828.1-201ENST00000555303 KIAA0556O60303 1618 aa15.42■□□□□ 0.06
AC004828.1-201ENST00000555303 FAM69CQ0P6D2 419 aa15.38■□□□□ 0.05
AC004828.1-201ENST00000555303 UACAQ9BZF9 1416 aa15.37■□□□□ 0.05
AC004828.1-201ENST00000555303 PRXQ9BXM0 1461 aa15.37■□□□□ 0.05
AC004828.1-201ENST00000555303 GOLGA3Q08378 1498 aa15.35■□□□□ 0.05
AC004828.1-201ENST00000555303 PLB1Q6P1J6 1458 aa15.35■□□□□ 0.05
AC004828.1-201ENST00000555303 KDM5BQ9UGL1 1544 aa15.34■□□□□ 0.05
AC004828.1-201ENST00000555303 GLI2P10070 1586 aa15.34■□□□□ 0.05
AC004828.1-201ENST00000555303 TSPOAP1O95153 1857 aa15.33■□□□□ 0.04
AC004828.1-201ENST00000555303 ASXL2Q76L83 1435 aa15.33■□□□□ 0.04
AC004828.1-201ENST00000555303 KDM6BO15054 1643 aa15.32■□□□□ 0.04
AC004828.1-201ENST00000555303 ZCCHC11Q5TAX3 1644 aaKnown RBP15.32■□□□□ 0.04
AC004828.1-201ENST00000555303 TTBK1Q5TCY1 1321 aaPredicted RBP15.3■□□□□ 0.04
AC004828.1-201ENST00000555303 PPRC1Q5VV67 1664 aaKnown RBP15.28■□□□□ 0.04
AC004828.1-201ENST00000555303 EEA1Q15075 1411 aa15.27■□□□□ 0.04
AC004828.1-201ENST00000555303 MAP3K4Q9Y6R4 1608 aa15.27■□□□□ 0.03
AC004828.1-201ENST00000555303 ABCA8O94911 1581 aa15.26■□□□□ 0.03
AC004828.1-201ENST00000555303 AEBP2Q6ZN18 517 aaPredicted RBP15.25■□□□□ 0.03
AC004828.1-201ENST00000555303 EPRSP07814 1512 aaKnown RBP15.25■□□□□ 0.03
AC004828.1-201ENST00000555303 WDR7Q9Y4E6 1490 aa15.22■□□□□ 0.03
AC004828.1-201ENST00000555303 SAMD9Q5K651 1589 aa15.22■□□□□ 0.03
AC004828.1-201ENST00000555303 TEX14Q8IWB6 1497 aa15.21■□□□□ 0.03
AC004828.1-201ENST00000555303 CFAP43Q8NDM7 1665 aa15.19■□□□□ 0.02
AC004828.1-201ENST00000555303 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
AC004828.1-201ENST00000555303 FAM9AQ8IZU1 332 aaPredicted RBP15.17■□□□□ 0.02
AC004828.1-201ENST00000555303 KIF21BO75037 1637 aa15.16■□□□□ 0.02
AC004828.1-201ENST00000555303 RAPGEF6Q8TEU7 1601 aa15.13■□□□□ 0.01
AC004828.1-201ENST00000555303 MAGI3Q5TCQ9 1506 aa15.12■□□□□ 0.01
AC004828.1-201ENST00000555303 EFCAB5A4FU69 1503 aa15.1■□□□□ 0.01
AC004828.1-201ENST00000555303 CD109Q6YHK3 1445 aa15.08■□□□□ 0
AC004828.1-201ENST00000555303 ATP10BO94823 1461 aa15.08■□□□□ 0
AC004828.1-201ENST00000555303 ABCA9Q8IUA7 1624 aa15.06■□□□□ 0
AC004828.1-201ENST00000555303 COL17A1Q9UMD9 1497 aaPredicted RBP15.06■□□□□ 0
AC004828.1-201ENST00000555303 P3H3Q8IVL6 736 aa15.03■□□□□ -0
AC004828.1-201ENST00000555303 NUP153P49790 1475 aaKnown RBP15.02■□□□□ -0
AC004828.1-201ENST00000555303 FHOD3Q2V2M9 1422 aa15.01□□□□□ -0.01
AC004828.1-201ENST00000555303 KCNH8Q96L42 1107 aa15.01□□□□□ -0.01
AC004828.1-201ENST00000555303 ARAP3Q8WWN8 1544 aa15□□□□□ -0.01
AC004828.1-201ENST00000555303 PHLDB1Q86UU1 1377 aa14.99□□□□□ -0.01
AC004828.1-201ENST00000555303 KDM4FA0A1W2PPD8 638 aa14.99□□□□□ -0.01
AC004828.1-201ENST00000555303 ADGRL1O94910 1474 aa14.99□□□□□ -0.01
AC004828.1-201ENST00000555303 NEO1Q92859 1461 aa14.96□□□□□ -0.01
AC004828.1-201ENST00000555303 CHIC1Q5VXU3 224 aa14.95□□□□□ -0.02
AC004828.1-201ENST00000555303 CFAP74Q9C0B2 1584 aa14.94□□□□□ -0.02
AC004828.1-201ENST00000555303 ARID3CA6NKF2 412 aa14.94□□□□□ -0.02
AC004828.1-201ENST00000555303 HECW1Q76N89 1606 aa14.93□□□□□ -0.02
AC004828.1-201ENST00000555303 FMN1Q68DA7 1419 aa14.92□□□□□ -0.02
AC004828.1-201ENST00000555303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
AC004828.1-201ENST00000555303 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
AC004828.1-201ENST00000555303 RANGAP1P46060 587 aaPredicted RBP14.91□□□□□ -0.02
AC004828.1-201ENST00000555303 ARHGAP35Q9NRY4 1499 aa14.89□□□□□ -0.03
AC004828.1-201ENST00000555303 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.88□□□□□ -0.03
AC004828.1-201ENST00000555303 PLEKHD1A6NEE1 506 aa14.88□□□□□ -0.03
AC004828.1-201ENST00000555303 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
AC004828.1-201ENST00000555303 FRMPD1Q5SYB0 1578 aa14.88□□□□□ -0.03
AC004828.1-201ENST00000555303 TTC37Q6PGP7 1564 aa14.88□□□□□ -0.03
AC004828.1-201ENST00000555303 CDK13Q14004 1512 aaKnown RBP14.87□□□□□ -0.03
AC004828.1-201ENST00000555303 RICTORQ6R327 1708 aa14.86□□□□□ -0.03
AC004828.1-201ENST00000555303 FANCAO15360 1455 aa14.84□□□□□ -0.03
AC004828.1-201ENST00000555303 ARHGEF40Q8TER5 1519 aa14.83□□□□□ -0.04
AC004828.1-201ENST00000555303 MYO5CQ9NQX4 1742 aa14.83□□□□□ -0.04
AC004828.1-201ENST00000555303 ZMYM4Q5VZL5 1548 aa14.82□□□□□ -0.04
AC004828.1-201ENST00000555303 DENND4BO75064 1496 aaPredicted RBP14.82□□□□□ -0.04
AC004828.1-201ENST00000555303 KIF14Q15058 1648 aa14.81□□□□□ -0.04
AC004828.1-201ENST00000555303 AKNAQ7Z591 1439 aa14.81□□□□□ -0.04
AC004828.1-201ENST00000555303 LRRIQ1Q96JM4 1722 aa14.8□□□□□ -0.04
AC004828.1-201ENST00000555303 ADAMTSL3P82987 1691 aa14.8□□□□□ -0.04
AC004828.1-201ENST00000555303 BCORL1Q5H9F3 1711 aa14.79□□□□□ -0.04
AC004828.1-201ENST00000555303 CDK11AQ9UQ88 783 aaPredicted RBP14.79□□□□□ -0.04
AC004828.1-201ENST00000555303 CCDC18Q5T9S5 1454 aa14.78□□□□□ -0.04
AC004828.1-201ENST00000555303 RAPGEF3O95398 923 aa14.78□□□□□ -0.04
AC004828.1-201ENST00000555303 HECW2Q9P2P5 1572 aa14.77□□□□□ -0.04
AC004828.1-201ENST00000555303 MAGI2Q86UL8 1455 aa14.77□□□□□ -0.04
AC004828.1-201ENST00000555303 PLCH2O75038 1416 aa14.77□□□□□ -0.04
AC004828.1-201ENST00000555303 CLIP1P30622 1438 aa14.77□□□□□ -0.04
AC004828.1-201ENST00000555303 PCF11O94913 1555 aaKnown RBP14.77□□□□□ -0.05
AC004828.1-201ENST00000555303 TROQ12816 1431 aaPredicted RBP14.76□□□□□ -0.05
AC004828.1-201ENST00000555303 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
AC004828.1-201ENST00000555303 CASKIN1Q8WXD9 1431 aa14.75□□□□□ -0.05
AC004828.1-201ENST00000555303 ZFYVE16Q7Z3T8 1539 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms