RNA–Protein interactions for RNA: ENST00000555225.5

SDR39U1-210, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-210ENST00000555225 CARMIL1Q5VZK9 1371 aa31.5■■■□□ 2.63
SDR39U1-210ENST00000555225 SHROOM2Q13796 1616 aa31.49■■■□□ 2.63
SDR39U1-210ENST00000555225 EEA1Q15075 1411 aa31.46■■■□□ 2.63
SDR39U1-210ENST00000555225 CSRNP3Q8WYN3 585 aa31.38■■■□□ 2.61
SDR39U1-210ENST00000555225 AEBP2Q6ZN18 517 aaPredicted RBP31.35■■■□□ 2.61
SDR39U1-210ENST00000555225 RAPGEF2Q9Y4G8 1499 aa31.33■■■□□ 2.61
SDR39U1-210ENST00000555225 KIF13AQ9H1H9 1805 aa31.31■■■□□ 2.6
SDR39U1-210ENST00000555225 PRXQ9BXM0 1461 aa31.27■■■□□ 2.6
SDR39U1-210ENST00000555225 FAM9AQ8IZU1 332 aaPredicted RBP31.27■■■□□ 2.6
SDR39U1-210ENST00000555225 KIAA0586Q9BVV6 1533 aa31.19■■■□□ 2.58
SDR39U1-210ENST00000555225 PRG4Q92954 1404 aaPredicted RBP31.19■■■□□ 2.58
SDR39U1-210ENST00000555225 JPH4Q96JJ6 628 aa31.14■■■□□ 2.58
SDR39U1-210ENST00000555225 ADCY10Q96PN6 1610 aa31.02■■■□□ 2.56
SDR39U1-210ENST00000555225 KIF21BO75037 1637 aa31.02■■■□□ 2.56
SDR39U1-210ENST00000555225 IQGAP2Q13576 1575 aa31■■■□□ 2.55
SDR39U1-210ENST00000555225 DIP2BQ9P265 1576 aa31■■■□□ 2.55
SDR39U1-210ENST00000555225 MAPKBP1O60336 1514 aa31■■■□□ 2.55
SDR39U1-210ENST00000555225 ABCC10Q5T3U5 1492 aa30.99■■■□□ 2.55
SDR39U1-210ENST00000555225 CTTNBP2Q8WZ74 1663 aa30.93■■■□□ 2.54
SDR39U1-210ENST00000555225 CARMIL2Q6F5E8 1435 aa30.89■■■□□ 2.53
SDR39U1-210ENST00000555225 GOLGA3Q08378 1498 aa30.89■■■□□ 2.53
SDR39U1-210ENST00000555225 UGGT2Q9NYU1 1516 aa30.87■■■□□ 2.53
SDR39U1-210ENST00000555225 FAM69CQ0P6D2 419 aa30.86■■■□□ 2.53
SDR39U1-210ENST00000555225 UBTFP17480 764 aaKnown RBP30.84■■■□□ 2.53
SDR39U1-210ENST00000555225 KDM6BO15054 1643 aa30.8■■■□□ 2.52
SDR39U1-210ENST00000555225 EHMT2Q96KQ7 1210 aa30.79■■■□□ 2.52
SDR39U1-210ENST00000555225 DISP1Q96F81 1524 aa30.77■■■□□ 2.52
SDR39U1-210ENST00000555225 TSPOAP1O95153 1857 aa30.76■■■□□ 2.51
SDR39U1-210ENST00000555225 TNIKQ9UKE5 1360 aa30.75■■■□□ 2.51
SDR39U1-210ENST00000555225 NPM1P06748 294 aaKnown RBP eCLIP30.74■■■□□ 2.51
SDR39U1-210ENST00000555225 PTPRGP23470 1445 aa30.71■■■□□ 2.51
SDR39U1-210ENST00000555225 KIAA0556O60303 1618 aa30.69■■■□□ 2.5
SDR39U1-210ENST00000555225 RANGAP1P46060 587 aaPredicted RBP30.61■■■□□ 2.49
SDR39U1-210ENST00000555225 TTBK1Q5TCY1 1321 aaPredicted RBP30.61■■■□□ 2.49
SDR39U1-210ENST00000555225 PPRC1Q5VV67 1664 aaKnown RBP30.6■■■□□ 2.49
SDR39U1-210ENST00000555225 KDM4FA0A1W2PPD8 638 aa30.58■■■□□ 2.49
SDR39U1-210ENST00000555225 SAMD9Q5K651 1589 aa30.58■■■□□ 2.49
SDR39U1-210ENST00000555225 ABCC2Q92887 1545 aa30.57■■■□□ 2.49
SDR39U1-210ENST00000555225 P3H3Q8IVL6 736 aa30.56■■■□□ 2.48
SDR39U1-210ENST00000555225 EFCAB5A4FU69 1503 aa30.55■■■□□ 2.48
SDR39U1-210ENST00000555225 ASXL2Q76L83 1435 aa30.5■■■□□ 2.47
SDR39U1-210ENST00000555225 GLI2P10070 1586 aa30.49■■■□□ 2.47
SDR39U1-210ENST00000555225 UACAQ9BZF9 1416 aa30.49■■■□□ 2.47
SDR39U1-210ENST00000555225 UHRF1BP1LA0JNW5 1464 aa30.45■■■□□ 2.47
SDR39U1-210ENST00000555225 LOC105371045A0A1W2PR82 267 aa30.44■■■□□ 2.46
SDR39U1-210ENST00000555225 PLB1Q6P1J6 1458 aa30.44■■■□□ 2.46
SDR39U1-210ENST00000555225 FHOD3Q2V2M9 1422 aa30.41■■■□□ 2.46
SDR39U1-210ENST00000555225 ARHGAP35Q9NRY4 1499 aa30.4■■■□□ 2.46
SDR39U1-210ENST00000555225 MAP3K4Q9Y6R4 1608 aa30.38■■■□□ 2.45
SDR39U1-210ENST00000555225 ABCA8O94911 1581 aa30.36■■■□□ 2.45
SDR39U1-210ENST00000555225 ZCCHC11Q5TAX3 1644 aaKnown RBP30.36■■■□□ 2.45
SDR39U1-210ENST00000555225 KDM5BQ9UGL1 1544 aa30.34■■■□□ 2.45
SDR39U1-210ENST00000555225 CLIP1P30622 1438 aa30.34■■■□□ 2.45
SDR39U1-210ENST00000555225 EPRSP07814 1512 aaKnown RBP30.33■■■□□ 2.45
SDR39U1-210ENST00000555225 ADGRL1O94910 1474 aa30.33■■■□□ 2.45
SDR39U1-210ENST00000555225 COL17A1Q9UMD9 1497 aaPredicted RBP30.33■■■□□ 2.45
SDR39U1-210ENST00000555225 FMN1Q68DA7 1419 aa30.3■■■□□ 2.44
SDR39U1-210ENST00000555225 CEP162Q5TB80 1403 aa30.25■■■□□ 2.43
SDR39U1-210ENST00000555225 RAPGEF6Q8TEU7 1601 aa30.24■■■□□ 2.43
SDR39U1-210ENST00000555225 TEX14Q8IWB6 1497 aa30.19■■■□□ 2.42
SDR39U1-210ENST00000555225 WDR7Q9Y4E6 1490 aa30.15■■■□□ 2.42
SDR39U1-210ENST00000555225 ATP10BO94823 1461 aa30.14■■■□□ 2.42
SDR39U1-210ENST00000555225 NUP153P49790 1475 aaKnown RBP30.14■■■□□ 2.42
SDR39U1-210ENST00000555225 ARID3CA6NKF2 412 aa30.1■■■□□ 2.41
SDR39U1-210ENST00000555225 ATP1B4Q9UN42 357 aaPredicted RBP30.1■■■□□ 2.41
SDR39U1-210ENST00000555225 HECW2Q9P2P5 1572 aa30.1■■■□□ 2.41
SDR39U1-210ENST00000555225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.09■■■□□ 2.41
SDR39U1-210ENST00000555225 HNRNPUL2Q1KMD3 747 aaKnown RBP30.09■■■□□ 2.41
SDR39U1-210ENST00000555225 CASKIN1Q8WXD9 1431 aa30.07■■■□□ 2.4
SDR39U1-210ENST00000555225 ILDR1Q86SU0 546 aaPredicted RBP30.06■■■□□ 2.4
SDR39U1-210ENST00000555225 HECW1Q76N89 1606 aa30.06■■■□□ 2.4
SDR39U1-210ENST00000555225 CFAP43Q8NDM7 1665 aa30.04■■■□□ 2.4
SDR39U1-210ENST00000555225 FYCO1Q9BQS8 1478 aa29.99■■■□□ 2.39
SDR39U1-210ENST00000555225 PLEKHD1A6NEE1 506 aa29.99■■■□□ 2.39
SDR39U1-210ENST00000555225 MAGI3Q5TCQ9 1506 aa29.99■■■□□ 2.39
SDR39U1-210ENST00000555225 CDK11AQ9UQ88 783 aaPredicted RBP29.97■■■□□ 2.39
SDR39U1-210ENST00000555225 PCF11O94913 1555 aaKnown RBP29.97■■■□□ 2.39
SDR39U1-210ENST00000555225 KCNH8Q96L42 1107 aa29.94■■■□□ 2.38
SDR39U1-210ENST00000555225 CD109Q6YHK3 1445 aa29.94■■■□□ 2.38
SDR39U1-210ENST00000555225 CCDC18Q5T9S5 1454 aa29.93■■■□□ 2.38
SDR39U1-210ENST00000555225 CDK13Q14004 1512 aaKnown RBP29.92■■■□□ 2.38
SDR39U1-210ENST00000555225 VPS8Q8N3P4 1428 aa29.89■■■□□ 2.38
SDR39U1-210ENST00000555225 LRRIQ1Q96JM4 1722 aa29.81■■■□□ 2.36
SDR39U1-210ENST00000555225 TROQ12816 1431 aaPredicted RBP29.77■■■□□ 2.36
SDR39U1-210ENST00000555225 ARAP3Q8WWN8 1544 aa29.76■■■□□ 2.36
SDR39U1-210ENST00000555225 ABCA9Q8IUA7 1624 aa29.74■■■□□ 2.35
SDR39U1-210ENST00000555225 FRMPD1Q5SYB0 1578 aa29.67■■■□□ 2.34
SDR39U1-210ENST00000555225 ADAMTSL3P82987 1691 aa29.66■■■□□ 2.34
SDR39U1-210ENST00000555225 MTUS2Q5JR59 1369 aa29.65■■■□□ 2.34
SDR39U1-210ENST00000555225 APLP2Q06481 763 aa29.65■■■□□ 2.34
SDR39U1-210ENST00000555225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.65■■■□□ 2.34
SDR39U1-210ENST00000555225 KIF14Q15058 1648 aa29.64■■■□□ 2.34
SDR39U1-210ENST00000555225 MAP3K1Q13233 1512 aa29.64■■■□□ 2.34
SDR39U1-210ENST00000555225 TIAM1Q13009 1591 aa29.6■■■□□ 2.33
SDR39U1-210ENST00000555225 PTPRMP28827 1452 aa29.57■■■□□ 2.32
SDR39U1-210ENST00000555225 TTC37Q6PGP7 1564 aa29.56■■■□□ 2.32
SDR39U1-210ENST00000555225 PHLDB1Q86UU1 1377 aa29.56■■■□□ 2.32
SDR39U1-210ENST00000555225 EHBP1L1Q8N3D4 1523 aa29.55■■■□□ 2.32
SDR39U1-210ENST00000555225 BCORL1Q5H9F3 1711 aa29.55■■■□□ 2.32
SDR39U1-210ENST00000555225 NEO1Q92859 1461 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms