RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 TOP2BQ02880 1626 aa23.8■■□□□ 1.4
TUBB3-207ENST00000554927 BIVM-ERCC5R4GMW8 1640 aa23.77■■□□□ 1.4
TUBB3-207ENST00000554927 ABCC10Q5T3U5 1492 aa23.75■■□□□ 1.39
TUBB3-207ENST00000554927 MAPKBP1O60336 1514 aa23.67■■□□□ 1.38
TUBB3-207ENST00000554927 RUSC2Q8N2Y8 1516 aa23.66■■□□□ 1.38
TUBB3-207ENST00000554927 DIP2BQ9P265 1576 aa23.65■■□□□ 1.38
TUBB3-207ENST00000554927 KDM4FA0A1W2PPD8 638 aa23.63■■□□□ 1.37
TUBB3-207ENST00000554927 KDM6BO15054 1643 aa23.62■■□□□ 1.37
TUBB3-207ENST00000554927 ADCY10Q96PN6 1610 aa23.61■■□□□ 1.37
TUBB3-207ENST00000554927 TSPOAP1O95153 1857 aa23.53■■□□□ 1.36
TUBB3-207ENST00000554927 TTBK1Q5TCY1 1321 aaPredicted RBP23.53■■□□□ 1.36
TUBB3-207ENST00000554927 KIAA0586Q9BVV6 1533 aa23.52■■□□□ 1.36
TUBB3-207ENST00000554927 ILDR1Q86SU0 546 aaPredicted RBP23.49■■□□□ 1.35
TUBB3-207ENST00000554927 PTPRGP23470 1445 aa23.45■■□□□ 1.34
TUBB3-207ENST00000554927 IGF1RP08069 1367 aa23.42■■□□□ 1.34
TUBB3-207ENST00000554927 KIF27Q86VH2 1401 aa23.39■■□□□ 1.33
TUBB3-207ENST00000554927 CUL7Q14999 1698 aa23.36■■□□□ 1.33
TUBB3-207ENST00000554927 CARMIL2Q6F5E8 1435 aa23.35■■□□□ 1.33
TUBB3-207ENST00000554927 ASXL2Q76L83 1435 aa23.35■■□□□ 1.33
TUBB3-207ENST00000554927 ABCC2Q92887 1545 aa23.35■■□□□ 1.33
TUBB3-207ENST00000554927 TNIKQ9UKE5 1360 aa23.35■■□□□ 1.33
TUBB3-207ENST00000554927 ADGRL1O94910 1474 aa23.33■■□□□ 1.33
TUBB3-207ENST00000554927 PLB1Q6P1J6 1458 aa23.33■■□□□ 1.33
TUBB3-207ENST00000554927 CARMIL1Q5VZK9 1371 aa23.28■■□□□ 1.32
TUBB3-207ENST00000554927 GLI2P10070 1586 aa23.27■■□□□ 1.32
TUBB3-207ENST00000554927 PPRC1Q5VV67 1664 aaKnown RBP23.25■■□□□ 1.31
TUBB3-207ENST00000554927 UACAQ9BZF9 1416 aa23.23■■□□□ 1.31
TUBB3-207ENST00000554927 UHRF1BP1LA0JNW5 1464 aa23.22■■□□□ 1.31
TUBB3-207ENST00000554927 IQGAP2Q13576 1575 aa23.21■■□□□ 1.31
TUBB3-207ENST00000554927 COL17A1Q9UMD9 1497 aaPredicted RBP23.19■■□□□ 1.3
TUBB3-207ENST00000554927 EPRSP07814 1512 aaKnown RBP23.18■■□□□ 1.3
TUBB3-207ENST00000554927 TEX14Q8IWB6 1497 aa23.17■■□□□ 1.3
TUBB3-207ENST00000554927 HECW2Q9P2P5 1572 aa23.15■■□□□ 1.3
TUBB3-207ENST00000554927 DISP1Q96F81 1524 aa23.13■■□□□ 1.29
TUBB3-207ENST00000554927 MAP3K4Q9Y6R4 1608 aa23.12■■□□□ 1.29
TUBB3-207ENST00000554927 KDM5BQ9UGL1 1544 aa23.12■■□□□ 1.29
TUBB3-207ENST00000554927 ZCCHC11Q5TAX3 1644 aaKnown RBP23.08■■□□□ 1.28
TUBB3-207ENST00000554927 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.28
TUBB3-207ENST00000554927 UGGT2Q9NYU1 1516 aa23.02■■□□□ 1.28
TUBB3-207ENST00000554927 KIAA0556O60303 1618 aa23■■□□□ 1.27
TUBB3-207ENST00000554927 RAPGEF2Q9Y4G8 1499 aa22.99■■□□□ 1.27
TUBB3-207ENST00000554927 KCNH8Q96L42 1107 aa22.98■■□□□ 1.27
TUBB3-207ENST00000554927 CD109Q6YHK3 1445 aa22.97■■□□□ 1.27
TUBB3-207ENST00000554927 MAGI3Q5TCQ9 1506 aa22.92■■□□□ 1.26
TUBB3-207ENST00000554927 CFAP43Q8NDM7 1665 aa22.87■■□□□ 1.25
TUBB3-207ENST00000554927 FBXO41Q8TF61 875 aa22.86■■□□□ 1.25
TUBB3-207ENST00000554927 GOLGA3Q08378 1498 aa22.84■■□□□ 1.25
TUBB3-207ENST00000554927 KIF21BO75037 1637 aa22.83■■□□□ 1.25
TUBB3-207ENST00000554927 ABCA8O94911 1581 aa22.81■■□□□ 1.24
TUBB3-207ENST00000554927 ARID3CA6NKF2 412 aa22.8■■□□□ 1.24
TUBB3-207ENST00000554927 FAM9AQ8IZU1 332 aaPredicted RBP22.78■■□□□ 1.24
TUBB3-207ENST00000554927 CTTNBP2Q8WZ74 1663 aa22.77■■□□□ 1.24
TUBB3-207ENST00000554927 ARAP3Q8WWN8 1544 aa22.74■■□□□ 1.23
TUBB3-207ENST00000554927 PTPRMP28827 1452 aa22.72■■□□□ 1.23
TUBB3-207ENST00000554927 ARID4BQ4LE39 1312 aaPredicted RBP22.69■■□□□ 1.22
TUBB3-207ENST00000554927 P3H3Q8IVL6 736 aa22.69■■□□□ 1.22
TUBB3-207ENST00000554927 RAPGEF3O95398 923 aa22.68■■□□□ 1.22
TUBB3-207ENST00000554927 PHLDB1Q86UU1 1377 aa22.66■■□□□ 1.22
TUBB3-207ENST00000554927 ATP10BO94823 1461 aa22.65■■□□□ 1.22
TUBB3-207ENST00000554927 ADAMTSL3P82987 1691 aa22.65■■□□□ 1.22
TUBB3-207ENST00000554927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.63■■□□□ 1.21
TUBB3-207ENST00000554927 HNRNPUL2Q1KMD3 747 aaKnown RBP22.63■■□□□ 1.21
TUBB3-207ENST00000554927 ABCA9Q8IUA7 1624 aa22.6■■□□□ 1.21
TUBB3-207ENST00000554927 PRXQ9BXM0 1461 aa22.59■■□□□ 1.21
TUBB3-207ENST00000554927 PCF11O94913 1555 aaKnown RBP22.59■■□□□ 1.21
TUBB3-207ENST00000554927 NEO1Q92859 1461 aa22.58■■□□□ 1.2
TUBB3-207ENST00000554927 MADDQ8WXG6 1647 aa22.57■■□□□ 1.2
TUBB3-207ENST00000554927 BCORL1Q5H9F3 1711 aa22.55■■□□□ 1.2
TUBB3-207ENST00000554927 PLPPR3Q6T4P5 718 aa22.55■■□□□ 1.2
TUBB3-207ENST00000554927 LMTK3Q96Q04 1460 aa22.54■■□□□ 1.2
TUBB3-207ENST00000554927 FRMPD1Q5SYB0 1578 aa22.5■■□□□ 1.19
TUBB3-207ENST00000554927 HSPA2P54652 639 aa22.5■■□□□ 1.19
TUBB3-207ENST00000554927 RAPGEF6Q8TEU7 1601 aa22.48■■□□□ 1.19
TUBB3-207ENST00000554927 RIMS1Q86UR5 1692 aaKnown RBP22.47■■□□□ 1.19
TUBB3-207ENST00000554927 DENND4BO75064 1496 aaPredicted RBP22.46■■□□□ 1.19
TUBB3-207ENST00000554927 RANGAP1P46060 587 aaPredicted RBP22.45■■□□□ 1.18
TUBB3-207ENST00000554927 ARHGEF40Q8TER5 1519 aa22.44■■□□□ 1.18
TUBB3-207ENST00000554927 POGZQ7Z3K3 1410 aa22.42■■□□□ 1.18
TUBB3-207ENST00000554927 PLEKHD1A6NEE1 506 aa22.42■■□□□ 1.18
TUBB3-207ENST00000554927 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
TUBB3-207ENST00000554927 NUP153P49790 1475 aaKnown RBP22.41■■□□□ 1.18
TUBB3-207ENST00000554927 AKNAQ7Z591 1439 aa22.4■■□□□ 1.18
TUBB3-207ENST00000554927 CERKQ8TCT0 537 aa22.4■■□□□ 1.18
TUBB3-207ENST00000554927 FANCAO15360 1455 aa22.4■■□□□ 1.18
TUBB3-207ENST00000554927 MLECQ14165 292 aa22.39■■□□□ 1.17
TUBB3-207ENST00000554927 FHOD3Q2V2M9 1422 aa22.37■■□□□ 1.17
TUBB3-207ENST00000554927 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
TUBB3-207ENST00000554927 RICTORQ6R327 1708 aa22.35■■□□□ 1.17
TUBB3-207ENST00000554927 CFAP74Q9C0B2 1584 aa22.34■■□□□ 1.17
TUBB3-207ENST00000554927 YEATS2Q9ULM3 1422 aa22.33■■□□□ 1.17
TUBB3-207ENST00000554927 ZFYVE16Q7Z3T8 1539 aa22.33■■□□□ 1.17
TUBB3-207ENST00000554927 EFCAB5A4FU69 1503 aa22.31■■□□□ 1.16
TUBB3-207ENST00000554927 ZMYM4Q5VZL5 1548 aa22.29■■□□□ 1.16
TUBB3-207ENST00000554927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.29■■□□□ 1.16
TUBB3-207ENST00000554927 MAGI2Q86UL8 1455 aa22.27■■□□□ 1.16
TUBB3-207ENST00000554927 TTC37Q6PGP7 1564 aa22.25■■□□□ 1.15
TUBB3-207ENST00000554927 SIGLEC1Q9BZZ2 1709 aa22.25■■□□□ 1.15
TUBB3-207ENST00000554927 DISP3Q9P2K9 1392 aa22.25■■□□□ 1.15
TUBB3-207ENST00000554927 HECW1Q76N89 1606 aa22.24■■□□□ 1.15
TUBB3-207ENST00000554927 FER1L4A9Z1Z3 1794 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 1280 ms