RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 SHROOM2Q13796 1616 aa35.46■■■■□ 3.27
SDR39U1-208ENST00000554698 KIF21BO75037 1637 aa35.44■■■■□ 3.26
SDR39U1-208ENST00000554698 RIMBP3CA6NJZ7 1639 aa35.42■■■■□ 3.26
SDR39U1-208ENST00000554698 RIMBP3BA6NNM3 1639 aa35.42■■■■□ 3.26
SDR39U1-208ENST00000554698 RIMBP3Q9UFD9 1639 aa35.42■■■■□ 3.26
SDR39U1-208ENST00000554698 JPH4Q96JJ6 628 aa35.41■■■■□ 3.26
SDR39U1-208ENST00000554698 IQGAP2Q13576 1575 aa35.37■■■■□ 3.25
SDR39U1-208ENST00000554698 PRG4Q92954 1404 aaPredicted RBP35.33■■■■□ 3.25
SDR39U1-208ENST00000554698 ERCC6L2Q5T890 1561 aa35.29■■■■□ 3.24
SDR39U1-208ENST00000554698 CTTNBP2Q8WZ74 1663 aa35.28■■■■□ 3.24
SDR39U1-208ENST00000554698 GOLGA3Q08378 1498 aa35.26■■■■□ 3.24
SDR39U1-208ENST00000554698 ARAP1Q96P48 1450 aa35.24■■■■□ 3.23
SDR39U1-208ENST00000554698 UGGT2Q9NYU1 1516 aa35.22■■■■□ 3.23
SDR39U1-208ENST00000554698 EHMT2Q96KQ7 1210 aa35.13■■■■□ 3.21
SDR39U1-208ENST00000554698 CARMIL2Q6F5E8 1435 aa35.13■■■■□ 3.21
SDR39U1-208ENST00000554698 DISP1Q96F81 1524 aa35.13■■■■□ 3.21
SDR39U1-208ENST00000554698 CYB5RLQ6IPT4 315 aa35.12■■■■□ 3.21
SDR39U1-208ENST00000554698 UBTFP17480 764 aaKnown RBP35.11■■■■□ 3.21
SDR39U1-208ENST00000554698 KIAA0556O60303 1618 aa35.02■■■■□ 3.2
SDR39U1-208ENST00000554698 TNIKQ9UKE5 1360 aa35■■■■□ 3.19
SDR39U1-208ENST00000554698 PTPRGP23470 1445 aa34.95■■■■□ 3.19
SDR39U1-208ENST00000554698 SAMD9Q5K651 1589 aa34.93■■■■□ 3.18
SDR39U1-208ENST00000554698 RANGAP1P46060 587 aaPredicted RBP34.87■■■■□ 3.17
SDR39U1-208ENST00000554698 EFCAB5A4FU69 1503 aa34.86■■■■□ 3.17
SDR39U1-208ENST00000554698 P3H3Q8IVL6 736 aa34.82■■■■□ 3.16
SDR39U1-208ENST00000554698 TTBK1Q5TCY1 1321 aaPredicted RBP34.82■■■■□ 3.16
SDR39U1-208ENST00000554698 LOC105371045A0A1W2PR82 267 aa34.78■■■■□ 3.16
SDR39U1-208ENST00000554698 ARHGAP35Q9NRY4 1499 aa34.74■■■■□ 3.15
SDR39U1-208ENST00000554698 FHOD3Q2V2M9 1422 aa34.74■■■■□ 3.15
SDR39U1-208ENST00000554698 UACAQ9BZF9 1416 aa34.73■■■■□ 3.15
SDR39U1-208ENST00000554698 ADCY10Q96PN6 1610 aa34.72■■■■□ 3.15
SDR39U1-208ENST00000554698 UHRF1BP1LA0JNW5 1464 aa34.7■■■■□ 3.15
SDR39U1-208ENST00000554698 PLB1Q6P1J6 1458 aa34.67■■■■□ 3.14
SDR39U1-208ENST00000554698 ABCC2Q92887 1545 aa34.66■■■■□ 3.14
SDR39U1-208ENST00000554698 CLIP1P30622 1438 aa34.65■■■■□ 3.14
SDR39U1-208ENST00000554698 ABCA8O94911 1581 aa34.64■■■■□ 3.14
SDR39U1-208ENST00000554698 CEP162Q5TB80 1403 aa34.58■■■■□ 3.13
SDR39U1-208ENST00000554698 NPM1P06748 294 aaKnown RBP eCLIP34.55■■■■□ 3.12
SDR39U1-208ENST00000554698 FMN1Q68DA7 1419 aa34.53■■■■□ 3.12
SDR39U1-208ENST00000554698 KDM5BQ9UGL1 1544 aa34.52■■■■□ 3.12
SDR39U1-208ENST00000554698 RAPGEF6Q8TEU7 1601 aa34.49■■■■□ 3.11
SDR39U1-208ENST00000554698 MAPKBP1O60336 1514 aa34.45■■■■□ 3.11
SDR39U1-208ENST00000554698 NUP153P49790 1475 aaKnown RBP34.43■■■■□ 3.1
SDR39U1-208ENST00000554698 ZCCHC11Q5TAX3 1644 aaKnown RBP34.4■■■■□ 3.1
SDR39U1-208ENST00000554698 ATP10BO94823 1461 aa34.37■■■■□ 3.09
SDR39U1-208ENST00000554698 ASXL2Q76L83 1435 aa34.33■■■■□ 3.09
SDR39U1-208ENST00000554698 ARID3CA6NKF2 412 aa34.31■■■■□ 3.08
SDR39U1-208ENST00000554698 CASKIN1Q8WXD9 1431 aa34.31■■■■□ 3.08
SDR39U1-208ENST00000554698 HECW1Q76N89 1606 aa34.29■■■■□ 3.08
SDR39U1-208ENST00000554698 PCF11O94913 1555 aaKnown RBP34.27■■■■□ 3.08
SDR39U1-208ENST00000554698 TRHP20396 242 aaPredicted RBP34.25■■■■□ 3.07
SDR39U1-208ENST00000554698 ABCC10Q5T3U5 1492 aa34.25■■■■□ 3.07
SDR39U1-208ENST00000554698 FYCO1Q9BQS8 1478 aa34.24■■■■□ 3.07
SDR39U1-208ENST00000554698 WDR7Q9Y4E6 1490 aa34.23■■■■□ 3.07
SDR39U1-208ENST00000554698 EPRSP07814 1512 aaKnown RBP34.22■■■■□ 3.07
SDR39U1-208ENST00000554698 ATP1B4Q9UN42 357 aaPredicted RBP34.22■■■■□ 3.07
SDR39U1-208ENST00000554698 CDK13Q14004 1512 aaKnown RBP34.18■■■■□ 3.06
SDR39U1-208ENST00000554698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.18■■■■□ 3.06
SDR39U1-208ENST00000554698 HNRNPUL2Q1KMD3 747 aaKnown RBP34.18■■■■□ 3.06
SDR39U1-208ENST00000554698 DIP2BQ9P265 1576 aa34.18■■■■□ 3.06
SDR39U1-208ENST00000554698 VPS8Q8N3P4 1428 aa34.15■■■■□ 3.06
SDR39U1-208ENST00000554698 FAM69CQ0P6D2 419 aa34.13■■■■□ 3.05
SDR39U1-208ENST00000554698 CCDC18Q5T9S5 1454 aa34.11■■■■□ 3.05
SDR39U1-208ENST00000554698 KIF13AQ9H1H9 1805 aa34.09■■■■□ 3.05
SDR39U1-208ENST00000554698 LRRIQ1Q96JM4 1722 aa34.09■■■■□ 3.05
SDR39U1-208ENST00000554698 GLI2P10070 1586 aa34.09■■■■□ 3.05
SDR39U1-208ENST00000554698 PLEKHD1A6NEE1 506 aa34.08■■■■□ 3.05
SDR39U1-208ENST00000554698 KCNH8Q96L42 1107 aa34.04■■■■□ 3.04
SDR39U1-208ENST00000554698 CDK11AQ9UQ88 783 aaPredicted RBP34.03■■■■□ 3.04
SDR39U1-208ENST00000554698 TROQ12816 1431 aaPredicted RBP33.94■■■■□ 3.02
SDR39U1-208ENST00000554698 MAP3K4Q9Y6R4 1608 aa33.92■■■■□ 3.02
SDR39U1-208ENST00000554698 MAGI3Q5TCQ9 1506 aa33.9■■■■□ 3.02
SDR39U1-208ENST00000554698 ABCA9Q8IUA7 1624 aa33.89■■■■□ 3.02
SDR39U1-208ENST00000554698 CFAP43Q8NDM7 1665 aa33.86■■■■□ 3.01
SDR39U1-208ENST00000554698 CD109Q6YHK3 1445 aa33.86■■■■□ 3.01
SDR39U1-208ENST00000554698 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.83■■■■□ 3.01
SDR39U1-208ENST00000554698 MAP3K1Q13233 1512 aa33.82■■■■□ 3.01
SDR39U1-208ENST00000554698 TIAM1Q13009 1591 aa33.82■■■■□ 3.01
SDR39U1-208ENST00000554698 KIF14Q15058 1648 aa33.8■■■■□ 3
SDR39U1-208ENST00000554698 PPRC1Q5VV67 1664 aaKnown RBP33.79■■■■□ 3
SDR39U1-208ENST00000554698 MTUS2Q5JR59 1369 aa33.78■■■■□ 3
SDR39U1-208ENST00000554698 TTC37Q6PGP7 1564 aa33.77■■■■□ 3
SDR39U1-208ENST00000554698 TSPOAP1O95153 1857 aa33.75■■■□□ 2.99
SDR39U1-208ENST00000554698 TEX14Q8IWB6 1497 aa33.74■■■□□ 2.99
SDR39U1-208ENST00000554698 EHBP1L1Q8N3D4 1523 aa33.74■■■□□ 2.99
SDR39U1-208ENST00000554698 LRRC9Q6ZRR7 1453 aa33.7■■■□□ 2.98
SDR39U1-208ENST00000554698 APLP2Q06481 763 aa33.69■■■□□ 2.98
SDR39U1-208ENST00000554698 PLCH2O75038 1416 aa33.66■■■□□ 2.98
SDR39U1-208ENST00000554698 KANK4Q5T7N3 995 aaPredicted RBP33.65■■■□□ 2.98
SDR39U1-208ENST00000554698 ARAP3Q8WWN8 1544 aa33.62■■■□□ 2.97
SDR39U1-208ENST00000554698 NEO1Q92859 1461 aa33.59■■■□□ 2.97
SDR39U1-208ENST00000554698 FANCAO15360 1455 aa33.58■■■□□ 2.97
SDR39U1-208ENST00000554698 PHLDB1Q86UU1 1377 aa33.58■■■□□ 2.97
SDR39U1-208ENST00000554698 MYO5CQ9NQX4 1742 aa33.58■■■□□ 2.97
SDR39U1-208ENST00000554698 NCOA2Q15596 1464 aa33.55■■■□□ 2.96
SDR39U1-208ENST00000554698 GPATCH8Q9UKJ3 1502 aaKnown RBP33.55■■■□□ 2.96
SDR39U1-208ENST00000554698 SUPT6HQ7KZ85 1726 aaKnown RBP33.54■■■□□ 2.96
SDR39U1-208ENST00000554698 CCNB3Q8WWL7 1395 aa33.53■■■□□ 2.96
SDR39U1-208ENST00000554698 PREX2Q70Z35 1606 aa33.52■■■□□ 2.96
SDR39U1-208ENST00000554698 COL17A1Q9UMD9 1497 aaPredicted RBP33.51■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms