RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 RAPGEF2Q9Y4G8 1499 aa22.98■■□□□ 1.27
NUMB-209ENST00000554315 KIAA0586Q9BVV6 1533 aa22.96■■□□□ 1.27
NUMB-209ENST00000554315 EEA1Q15075 1411 aa22.95■■□□□ 1.27
NUMB-209ENST00000554315 ARAP1Q96P48 1450 aa22.91■■□□□ 1.26
NUMB-209ENST00000554315 PRG4Q92954 1404 aaPredicted RBP22.9■■□□□ 1.26
NUMB-209ENST00000554315 SHROOM2Q13796 1616 aa22.87■■□□□ 1.25
NUMB-209ENST00000554315 PRXQ9BXM0 1461 aa22.86■■□□□ 1.25
NUMB-209ENST00000554315 FAM9AQ8IZU1 332 aaPredicted RBP22.85■■□□□ 1.25
NUMB-209ENST00000554315 CARMIL2Q6F5E8 1435 aa22.78■■□□□ 1.24
NUMB-209ENST00000554315 ERCC6L2Q5T890 1561 aa22.77■■□□□ 1.24
NUMB-209ENST00000554315 IQGAP2Q13576 1575 aa22.75■■□□□ 1.23
NUMB-209ENST00000554315 PTPRGP23470 1445 aa22.68■■□□□ 1.22
NUMB-209ENST00000554315 TNIKQ9UKE5 1360 aa22.68■■□□□ 1.22
NUMB-209ENST00000554315 NPM1P06748 294 aaKnown RBP eCLIP22.67■■□□□ 1.22
NUMB-209ENST00000554315 UGGT2Q9NYU1 1516 aa22.65■■□□□ 1.22
NUMB-209ENST00000554315 TTBK1Q5TCY1 1321 aaPredicted RBP22.63■■□□□ 1.21
NUMB-209ENST00000554315 TRHP20396 242 aaPredicted RBP22.62■■□□□ 1.21
NUMB-209ENST00000554315 GOLGA3Q08378 1498 aa22.62■■□□□ 1.21
NUMB-209ENST00000554315 UBTFP17480 764 aaKnown RBP22.6■■□□□ 1.21
NUMB-209ENST00000554315 DISP1Q96F81 1524 aa22.6■■□□□ 1.21
NUMB-209ENST00000554315 CTTNBP2Q8WZ74 1663 aa22.59■■□□□ 1.21
NUMB-209ENST00000554315 KIF21BO75037 1637 aa22.57■■□□□ 1.2
NUMB-209ENST00000554315 EHMT2Q96KQ7 1210 aa22.52■■□□□ 1.2
NUMB-209ENST00000554315 KIAA0556O60303 1618 aa22.5■■□□□ 1.19
NUMB-209ENST00000554315 P3H3Q8IVL6 736 aa22.49■■□□□ 1.19
NUMB-209ENST00000554315 UACAQ9BZF9 1416 aa22.49■■□□□ 1.19
NUMB-209ENST00000554315 RANGAP1P46060 587 aaPredicted RBP22.48■■□□□ 1.19
NUMB-209ENST00000554315 UHRF1BP1LA0JNW5 1464 aa22.44■■□□□ 1.18
NUMB-209ENST00000554315 ADCY10Q96PN6 1610 aa22.42■■□□□ 1.18
NUMB-209ENST00000554315 ABCC2Q92887 1545 aa22.39■■□□□ 1.18
NUMB-209ENST00000554315 SAMD9Q5K651 1589 aa22.35■■□□□ 1.17
NUMB-209ENST00000554315 MAPKBP1O60336 1514 aa22.35■■□□□ 1.17
NUMB-209ENST00000554315 FAM69CQ0P6D2 419 aa22.34■■□□□ 1.17
NUMB-209ENST00000554315 PLB1Q6P1J6 1458 aa22.33■■□□□ 1.17
NUMB-209ENST00000554315 EFCAB5A4FU69 1503 aa22.33■■□□□ 1.16
NUMB-209ENST00000554315 KDM5BQ9UGL1 1544 aa22.31■■□□□ 1.16
NUMB-209ENST00000554315 ABCC10Q5T3U5 1492 aa22.29■■□□□ 1.16
NUMB-209ENST00000554315 ABCA8O94911 1581 aa22.28■■□□□ 1.16
NUMB-209ENST00000554315 FHOD3Q2V2M9 1422 aa22.28■■□□□ 1.16
NUMB-209ENST00000554315 ASXL2Q76L83 1435 aa22.27■■□□□ 1.16
NUMB-209ENST00000554315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.23■■□□□ 1.15
NUMB-209ENST00000554315 HNRNPUL2Q1KMD3 747 aaKnown RBP22.23■■□□□ 1.15
NUMB-209ENST00000554315 FMN1Q68DA7 1419 aa22.21■■□□□ 1.15
NUMB-209ENST00000554315 ARHGAP35Q9NRY4 1499 aa22.2■■□□□ 1.14
NUMB-209ENST00000554315 ARID3CA6NKF2 412 aa22.19■■□□□ 1.14
NUMB-209ENST00000554315 ZCCHC11Q5TAX3 1644 aaKnown RBP22.18■■□□□ 1.14
NUMB-209ENST00000554315 ATP10BO94823 1461 aa22.18■■□□□ 1.14
NUMB-209ENST00000554315 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
NUMB-209ENST00000554315 RAPGEF6Q8TEU7 1601 aa22.16■■□□□ 1.14
NUMB-209ENST00000554315 KCNH8Q96L42 1107 aa22.16■■□□□ 1.14
NUMB-209ENST00000554315 DIP2BQ9P265 1576 aa22.14■■□□□ 1.14
NUMB-209ENST00000554315 WDR7Q9Y4E6 1490 aa22.14■■□□□ 1.13
NUMB-209ENST00000554315 LOC105371045A0A1W2PR82 267 aa22.14■■□□□ 1.13
NUMB-209ENST00000554315 PLEKHD1A6NEE1 506 aa22.14■■□□□ 1.13
NUMB-209ENST00000554315 CLIP1P30622 1438 aa22.13■■□□□ 1.13
NUMB-209ENST00000554315 KIF13AQ9H1H9 1805 aa22.12■■□□□ 1.13
NUMB-209ENST00000554315 EPRSP07814 1512 aaKnown RBP22.11■■□□□ 1.13
NUMB-209ENST00000554315 NUP153P49790 1475 aaKnown RBP22.1■■□□□ 1.13
NUMB-209ENST00000554315 GLI2P10070 1586 aa22.1■■□□□ 1.13
NUMB-209ENST00000554315 CDK11AQ9UQ88 783 aaPredicted RBP22.09■■□□□ 1.13
NUMB-209ENST00000554315 CEP162Q5TB80 1403 aa22■■□□□ 1.11
NUMB-209ENST00000554315 CD109Q6YHK3 1445 aa22■■□□□ 1.11
NUMB-209ENST00000554315 CASKIN1Q8WXD9 1431 aa21.99■■□□□ 1.11
NUMB-209ENST00000554315 HECW1Q76N89 1606 aa21.97■■□□□ 1.11
NUMB-209ENST00000554315 TEX14Q8IWB6 1497 aa21.97■■□□□ 1.11
NUMB-209ENST00000554315 TSPOAP1O95153 1857 aa21.94■■□□□ 1.1
NUMB-209ENST00000554315 MAP3K4Q9Y6R4 1608 aa21.93■■□□□ 1.1
NUMB-209ENST00000554315 CDK13Q14004 1512 aaKnown RBP21.91■■□□□ 1.1
NUMB-209ENST00000554315 MAGI3Q5TCQ9 1506 aa21.91■■□□□ 1.1
NUMB-209ENST00000554315 CCDC18Q5T9S5 1454 aa21.9■■□□□ 1.1
NUMB-209ENST00000554315 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
NUMB-209ENST00000554315 CFAP43Q8NDM7 1665 aa21.89■■□□□ 1.1
NUMB-209ENST00000554315 PHLDB1Q86UU1 1377 aa21.88■■□□□ 1.09
NUMB-209ENST00000554315 ABCA9Q8IUA7 1624 aa21.85■■□□□ 1.09
NUMB-209ENST00000554315 TROQ12816 1431 aaPredicted RBP21.84■■□□□ 1.09
NUMB-209ENST00000554315 PCF11O94913 1555 aaKnown RBP21.83■■□□□ 1.09
NUMB-209ENST00000554315 KDM6BO15054 1643 aa21.83■■□□□ 1.08
NUMB-209ENST00000554315 PPRC1Q5VV67 1664 aaKnown RBP21.82■■□□□ 1.08
NUMB-209ENST00000554315 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.77■■□□□ 1.08
NUMB-209ENST00000554315 NEO1Q92859 1461 aa21.77■■□□□ 1.08
NUMB-209ENST00000554315 EFCAB2Q5VUJ9 269 aa21.77■■□□□ 1.08
NUMB-209ENST00000554315 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
NUMB-209ENST00000554315 PLCH2O75038 1416 aa21.75■■□□□ 1.07
NUMB-209ENST00000554315 MTUS2Q5JR59 1369 aa21.74■■□□□ 1.07
NUMB-209ENST00000554315 COL17A1Q9UMD9 1497 aaPredicted RBP21.74■■□□□ 1.07
NUMB-209ENST00000554315 ARAP3Q8WWN8 1544 aa21.73■■□□□ 1.07
NUMB-209ENST00000554315 KIF14Q15058 1648 aa21.72■■□□□ 1.07
NUMB-209ENST00000554315 LRRIQ1Q96JM4 1722 aa21.72■■□□□ 1.07
NUMB-209ENST00000554315 APLP2Q06481 763 aa21.71■■□□□ 1.07
NUMB-209ENST00000554315 FANCAO15360 1455 aa21.7■■□□□ 1.06
NUMB-209ENST00000554315 AKNAQ7Z591 1439 aa21.7■■□□□ 1.06
NUMB-209ENST00000554315 TTC37Q6PGP7 1564 aa21.67■■□□□ 1.06
NUMB-209ENST00000554315 RAPGEF3O95398 923 aa21.66■■□□□ 1.06
NUMB-209ENST00000554315 CFAP74Q9C0B2 1584 aa21.64■■□□□ 1.06
NUMB-209ENST00000554315 DENND4BO75064 1496 aaPredicted RBP21.63■■□□□ 1.05
NUMB-209ENST00000554315 CCNB3Q8WWL7 1395 aa21.61■■□□□ 1.05
NUMB-209ENST00000554315 SCAPERQ9BY12 1400 aa21.6■■□□□ 1.05
NUMB-209ENST00000554315 ARHGAP5Q13017 1502 aa21.6■■□□□ 1.05
NUMB-209ENST00000554315 CFDP1Q9UEE9 299 aaPredicted RBP21.6■■□□□ 1.05
NUMB-209ENST00000554315 MYO5CQ9NQX4 1742 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms