RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 SF3B1O75533 1304 aaKnown RBP eCLIP14.99□□□□□ -0.012e-6■■■■■ 137.9
NUMB-209ENST00000554315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.66□□□□□ -0.062e-6■■■■■ 80.8
NUMB-209ENST00000554315 SF3B4Q15427 424 aaKnown RBP eCLIP12.59□□□□□ -0.391e-10■■■■■ 47.3
NUMB-209ENST00000554315 QKIQ96PU8 341 aaKnown RBP eCLIP13.82□□□□□ -0.21e-7■■■■■ 37.6
NUMB-209ENST00000554315 PCBP2Q15366 365 aaKnown RBP eCLIP13.09□□□□□ -0.311e-8■■■■■ 36
NUMB-209ENST00000554315 AGGF1Q8N302 714 aaeCLIP13.42□□□□□ -0.261e-9■■■■■ 34.6
NUMB-209ENST00000554315 GTF2F1P35269 517 aaKnown RBP eCLIP14.95□□□□□ -0.021e-7■■■■■ 28.8
NUMB-209ENST00000554315 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.87□□□□□ -0.352e-8■■■■■ 28.5
NUMB-209ENST00000554315 AQRO60306 1485 aaKnown RBP eCLIP23.74■■□□□ 1.392e-8■■■■■ 27.9
NUMB-209ENST00000554315 RBFOX2O43251 390 aaKnown RBP eCLIP10.81□□□□□ -0.681e-12■■■■□ 26.1
NUMB-209ENST00000554315 HNRNPLP14866 589 aaKnown RBP eCLIP14.26□□□□□ -0.131e-10■■■■□ 21.5
NUMB-209ENST00000554315 KHSRPQ92945 711 aaKnown RBP eCLIP14.63□□□□□ -0.074e-6■■■■□ 20.7
NUMB-209ENST00000554315 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.412e-6■■■■□ 20.6
NUMB-209ENST00000554315 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.72■□□□□ 0.272e-7■■■■□ 20.5
NUMB-209ENST00000554315 MATR3P43243 847 aaKnown RBP eCLIP15.09■□□□□ 0.011e-7■■■■□ 20.4
NUMB-209ENST00000554315 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.62■□□□□ 0.251e-10■■■■□ 19.6
NUMB-209ENST00000554315 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.03■□□□□ 0.163e-7■■■□□ 19.2
NUMB-209ENST00000554315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.02■□□□□ 0.963e-9■■■□□ 17.6
NUMB-209ENST00000554315 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.51□□□□□ -0.571e-6■■■□□ 16.4
NUMB-209ENST00000554315 EFTUD2Q15029 972 aaKnown RBP eCLIP13.19□□□□□ -0.39e-8■■■□□ 16.2
NUMB-209ENST00000554315 PRPF4O43172 522 aaKnown RBP eCLIP13.16□□□□□ -0.37e-9■■■□□ 14.9
NUMB-209ENST00000554315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.13■□□□□ 0.651e-7■■□□□ 14.4
NUMB-209ENST00000554315 AATFQ9NY61 560 aaKnown RBP eCLIP16.7■□□□□ 0.265e-8■■□□□ 13.7
NUMB-209ENST00000554315 PTBP1P26599 531 aaKnown RBP eCLIP10.77□□□□□ -0.691e-7■■□□□ 13.6
NUMB-209ENST00000554315 NCBP2P52298 156 aaKnown RBP eCLIP12.74□□□□□ -0.373e-6■■□□□ 13.1
NUMB-209ENST00000554315 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.72□□□□□ -0.533e-7■■□□□ 12.8
NUMB-209ENST00000554315 ZRANB2O95218 330 aaKnown RBP eCLIP13.98□□□□□ -0.172e-10■■□□□ 12
NUMB-209ENST00000554315 DDX3XO00571 662 aaKnown RBP eCLIP14.24□□□□□ -0.132e-6■■□□□ 11.6
NUMB-209ENST00000554315 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.35□□□□□ -0.115e-9■■□□□ 11.4
NUMB-209ENST00000554315 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.5■□□□□ 0.072e-10■□□□□ 11.2
NUMB-209ENST00000554315 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.78□□□□□ -0.041e-7■□□□□ 11
NUMB-209ENST00000554315 RBM15Q96T37 977 aaKnown RBP eCLIP13.81□□□□□ -0.28e-7■□□□□ 10.9
NUMB-209ENST00000554315 PPIGQ13427 754 aaKnown RBP eCLIP15.59■□□□□ 0.092e-6■□□□□ 10.5
NUMB-209ENST00000554315 HNRNPCP07910 306 aaKnown RBP eCLIP10.33□□□□□ -0.764e-6■□□□□ 10.4
NUMB-209ENST00000554315 AARSP49588 968 aaKnown RBP eCLIP14.88□□□□□ -0.038e-6■□□□□ 10.3
NUMB-209ENST00000554315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.58■□□□□ 0.571e-6■□□□□ 10.1
NUMB-209ENST00000554315 U2AF2P26368 475 aaKnown RBP eCLIP15.53■□□□□ 0.084e-7■□□□□ 9.6
NUMB-209ENST00000554315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.87■□□□□ 0.934e-8■□□□□ 8.6
Retrieved 38 of 38 RNA–protein pairs in 181.2 ms