RNA–Protein interactions for RNA: ENST00000554227.6

SNRPN-207, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 5 BASIC

Gene SNRPN, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-207ENST00000554227 GRIN2AQ12879 1464 aa30.28■■■□□ 2.44
SNRPN-207ENST00000554227 CHMP7Q8WUX9 453 aaPredicted RBP30.27■■■□□ 2.44
SNRPN-207ENST00000554227 ARHGAP35Q9NRY4 1499 aa30.24■■■□□ 2.43
SNRPN-207ENST00000554227 ARAP1Q96P48 1450 aa30.21■■■□□ 2.43
SNRPN-207ENST00000554227 P3H3Q8IVL6 736 aa30.14■■■□□ 2.42
SNRPN-207ENST00000554227 CEP170Q5SW79 1584 aa30.13■■■□□ 2.41
SNRPN-207ENST00000554227 VPS8Q8N3P4 1428 aa30.12■■■□□ 2.41
SNRPN-207ENST00000554227 IQGAP2Q13576 1575 aa30.12■■■□□ 2.41
SNRPN-207ENST00000554227 CHD1O14646 1710 aa30.11■■■□□ 2.41
SNRPN-207ENST00000554227 PPARGC1BQ86YN6 1023 aaKnown RBP30.08■■■□□ 2.41
SNRPN-207ENST00000554227 KIAA0586Q9BVV6 1533 aa30.07■■■□□ 2.4
SNRPN-207ENST00000554227 NUP160Q12769 1436 aa30.05■■■□□ 2.4
SNRPN-207ENST00000554227 EFCAB5A4FU69 1503 aa30.04■■■□□ 2.4
SNRPN-207ENST00000554227 FHOD3Q2V2M9 1422 aa30.03■■■□□ 2.4
SNRPN-207ENST00000554227 SAMD9Q5K651 1589 aa30.03■■■□□ 2.4
SNRPN-207ENST00000554227 UGGT2Q9NYU1 1516 aa29.95■■■□□ 2.38
SNRPN-207ENST00000554227 TTBK1Q5TCY1 1321 aaPredicted RBP29.87■■■□□ 2.37
SNRPN-207ENST00000554227 DISP1Q96F81 1524 aa29.87■■■□□ 2.37
SNRPN-207ENST00000554227 JPH4Q96JJ6 628 aa29.86■■■□□ 2.37
SNRPN-207ENST00000554227 KIAA0556O60303 1618 aa29.83■■■□□ 2.37
SNRPN-207ENST00000554227 PCF11O94913 1555 aaKnown RBP29.82■■■□□ 2.36
SNRPN-207ENST00000554227 APLP2Q06481 763 aa29.81■■■□□ 2.36
SNRPN-207ENST00000554227 FMN1Q68DA7 1419 aa29.78■■■□□ 2.36
SNRPN-207ENST00000554227 ATP1B4Q9UN42 357 aaPredicted RBP29.77■■■□□ 2.36
SNRPN-207ENST00000554227 CASKIN1Q8WXD9 1431 aa29.72■■■□□ 2.35
SNRPN-207ENST00000554227 PCGF6Q9BYE7 350 aa29.71■■■□□ 2.35
SNRPN-207ENST00000554227 CLASP1Q7Z460 1538 aa29.7■■■□□ 2.35
SNRPN-207ENST00000554227 FYCO1Q9BQS8 1478 aa29.69■■■□□ 2.34
SNRPN-207ENST00000554227 TRIM26Q12899 539 aaPredicted RBP29.69■■■□□ 2.34
SNRPN-207ENST00000554227 KANK4Q5T7N3 995 aaPredicted RBP29.69■■■□□ 2.34
SNRPN-207ENST00000554227 PRG4Q92954 1404 aaPredicted RBP29.69■■■□□ 2.34
SNRPN-207ENST00000554227 CARMIL2Q6F5E8 1435 aa29.68■■■□□ 2.34
SNRPN-207ENST00000554227 SHROOM2Q13796 1616 aa29.68■■■□□ 2.34
SNRPN-207ENST00000554227 LRRIQ1Q96JM4 1722 aa29.64■■■□□ 2.34
SNRPN-207ENST00000554227 TIAM1Q13009 1591 aa29.64■■■□□ 2.34
SNRPN-207ENST00000554227 ERCC6L2Q5T890 1561 aa29.6■■■□□ 2.33
SNRPN-207ENST00000554227 CFAP43Q8NDM7 1665 aa29.58■■■□□ 2.33
SNRPN-207ENST00000554227 MAP3K1Q13233 1512 aa29.58■■■□□ 2.33
SNRPN-207ENST00000554227 OSCARQ8IYS5 282 aa29.54■■■□□ 2.32
SNRPN-207ENST00000554227 HECW1Q76N89 1606 aa29.52■■■□□ 2.32
SNRPN-207ENST00000554227 ARID3CA6NKF2 412 aa29.52■■■□□ 2.32
SNRPN-207ENST00000554227 PLB1Q6P1J6 1458 aa29.51■■■□□ 2.31
SNRPN-207ENST00000554227 RAPGEF6Q8TEU7 1601 aa29.51■■■□□ 2.31
SNRPN-207ENST00000554227 LRRC9Q6ZRR7 1453 aa29.49■■■□□ 2.31
SNRPN-207ENST00000554227 PTPRGP23470 1445 aa29.46■■■□□ 2.31
SNRPN-207ENST00000554227 EPRSP07814 1512 aaKnown RBP29.45■■■□□ 2.31
SNRPN-207ENST00000554227 CDK13Q14004 1512 aaKnown RBP29.45■■■□□ 2.3
SNRPN-207ENST00000554227 NUP153P49790 1475 aaKnown RBP29.44■■■□□ 2.3
SNRPN-207ENST00000554227 CCDC18Q5T9S5 1454 aa29.41■■■□□ 2.3
SNRPN-207ENST00000554227 ABCA8O94911 1581 aa29.41■■■□□ 2.3
SNRPN-207ENST00000554227 MAGI3Q5TCQ9 1506 aa29.36■■■□□ 2.29
SNRPN-207ENST00000554227 MTUS2Q5JR59 1369 aa29.33■■■□□ 2.29
SNRPN-207ENST00000554227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.31■■■□□ 2.28
SNRPN-207ENST00000554227 HNRNPUL2Q1KMD3 747 aaKnown RBP29.31■■■□□ 2.28
SNRPN-207ENST00000554227 UACAQ9BZF9 1416 aa29.27■■■□□ 2.28
SNRPN-207ENST00000554227 PHLDB1Q86UU1 1377 aa29.26■■■□□ 2.27
SNRPN-207ENST00000554227 EHBP1L1Q8N3D4 1523 aa29.26■■■□□ 2.27
SNRPN-207ENST00000554227 ATP10BO94823 1461 aa29.24■■■□□ 2.27
SNRPN-207ENST00000554227 SUPT6HQ7KZ85 1726 aaKnown RBP29.21■■■□□ 2.27
SNRPN-207ENST00000554227 NCOA2Q15596 1464 aa29.19■■■□□ 2.26
SNRPN-207ENST00000554227 ABCC2Q92887 1545 aa29.19■■■□□ 2.26
SNRPN-207ENST00000554227 RRBP1Q9P2E9 1410 aaKnown RBP29.17■■■□□ 2.26
SNRPN-207ENST00000554227 CDK11AQ9UQ88 783 aaPredicted RBP29.16■■■□□ 2.26
SNRPN-207ENST00000554227 ARHGEF11O15085 1522 aa29.11■■■□□ 2.25
SNRPN-207ENST00000554227 CCNB3Q8WWL7 1395 aa29.11■■■□□ 2.25
SNRPN-207ENST00000554227 TROQ12816 1431 aaPredicted RBP29.1■■■□□ 2.25
SNRPN-207ENST00000554227 UHRF1BP1LA0JNW5 1464 aa29.1■■■□□ 2.25
SNRPN-207ENST00000554227 ADCY10Q96PN6 1610 aa29.07■■■□□ 2.24
SNRPN-207ENST00000554227 PLEKHD1A6NEE1 506 aa29.07■■■□□ 2.24
SNRPN-207ENST00000554227 KIF14Q15058 1648 aa29.05■■■□□ 2.24
SNRPN-207ENST00000554227 ZCCHC11Q5TAX3 1644 aaKnown RBP29.04■■■□□ 2.24
SNRPN-207ENST00000554227 MYOM3Q5VTT5 1437 aa29.03■■■□□ 2.24
SNRPN-207ENST00000554227 FGD6Q6ZV73 1430 aa29.02■■■□□ 2.24
SNRPN-207ENST00000554227 KDM5BQ9UGL1 1544 aa29.01■■■□□ 2.24
SNRPN-207ENST00000554227 FAM50AQ14320 339 aaKnown RBP29.01■■■□□ 2.23
SNRPN-207ENST00000554227 ITGAEP38570 1179 aa28.98■■■□□ 2.23
SNRPN-207ENST00000554227 RIMBP3CA6NJZ7 1639 aa28.96■■■□□ 2.23
SNRPN-207ENST00000554227 RIMBP3BA6NNM3 1639 aa28.96■■■□□ 2.23
SNRPN-207ENST00000554227 RIMBP3Q9UFD9 1639 aa28.96■■■□□ 2.23
SNRPN-207ENST00000554227 PTPN23Q9H3S7 1636 aa28.91■■■□□ 2.22
SNRPN-207ENST00000554227 ABCC10Q5T3U5 1492 aa28.88■■■□□ 2.21
SNRPN-207ENST00000554227 KCNH8Q96L42 1107 aa28.87■■■□□ 2.21
SNRPN-207ENST00000554227 GPATCH8Q9UKJ3 1502 aaKnown RBP28.86■■■□□ 2.21
SNRPN-207ENST00000554227 CYB5RLQ6IPT4 315 aa28.86■■■□□ 2.21
SNRPN-207ENST00000554227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.85■■■□□ 2.21
SNRPN-207ENST00000554227 CDC42BPAQ5VT25 1732 aa28.85■■■□□ 2.21
SNRPN-207ENST00000554227 MIA2Q96PC5 1412 aa28.84■■■□□ 2.21
SNRPN-207ENST00000554227 TCOF1Q13428 1488 aaKnown RBP28.82■■■□□ 2.2
SNRPN-207ENST00000554227 ITSN2Q9NZM3 1697 aa28.82■■■□□ 2.2
SNRPN-207ENST00000554227 ZNF644Q9H582 1327 aaPredicted RBP28.81■■■□□ 2.2
SNRPN-207ENST00000554227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.79■■■□□ 2.2
SNRPN-207ENST00000554227 CFDP1Q9UEE9 299 aaPredicted RBP28.79■■■□□ 2.2
SNRPN-207ENST00000554227 TTC37Q6PGP7 1564 aa28.79■■■□□ 2.2
SNRPN-207ENST00000554227 NPM1P06748 294 aaKnown RBP eCLIP28.77■■■□□ 2.2
SNRPN-207ENST00000554227 WDR7Q9Y4E6 1490 aa28.75■■■□□ 2.19
SNRPN-207ENST00000554227 PTPRKQ15262 1439 aa28.75■■■□□ 2.19
SNRPN-207ENST00000554227 ASXL2Q76L83 1435 aa28.75■■■□□ 2.19
SNRPN-207ENST00000554227 ZNF777Q9ULD5 760 aaPredicted RBP28.75■■■□□ 2.19
SNRPN-207ENST00000554227 CDC42BPBQ9Y5S2 1711 aa28.73■■■□□ 2.19
SNRPN-207ENST00000554227 CAMSAP2Q08AD1 1489 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms