RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-219ENST00000553745 CEP170Q5SW79 1584 aa22.44■■□□□ 1.18
ABCD4-219ENST00000553745 CLIP1P30622 1438 aa22.44■■□□□ 1.18
ABCD4-219ENST00000553745 FBLN2P98095 1184 aa22.42■■□□□ 1.18
ABCD4-219ENST00000553745 RANGAP1P46060 587 aaPredicted RBP22.4■■□□□ 1.18
ABCD4-219ENST00000553745 IQGAP2Q13576 1575 aa22.39■■□□□ 1.18
ABCD4-219ENST00000553745 NUP160Q12769 1436 aa22.38■■□□□ 1.17
ABCD4-219ENST00000553745 ARHGAP35Q9NRY4 1499 aa22.34■■□□□ 1.17
ABCD4-219ENST00000553745 KIAA0586Q9BVV6 1533 aa22.33■■□□□ 1.17
ABCD4-219ENST00000553745 ARAP1Q96P48 1450 aa22.31■■□□□ 1.16
ABCD4-219ENST00000553745 SAMD9Q5K651 1589 aa22.31■■□□□ 1.16
ABCD4-219ENST00000553745 EFCAB5A4FU69 1503 aa22.3■■□□□ 1.16
ABCD4-219ENST00000553745 UGGT2Q9NYU1 1516 aa22.26■■□□□ 1.15
ABCD4-219ENST00000553745 VPS8Q8N3P4 1428 aa22.21■■□□□ 1.15
ABCD4-219ENST00000553745 FHOD3Q2V2M9 1422 aa22.2■■□□□ 1.14
ABCD4-219ENST00000553745 CLASP1Q7Z460 1538 aa22.2■■□□□ 1.14
ABCD4-219ENST00000553745 KIAA0556O60303 1618 aa22.19■■□□□ 1.14
ABCD4-219ENST00000553745 PCGF6Q9BYE7 350 aa22.19■■□□□ 1.14
ABCD4-219ENST00000553745 P3H3Q8IVL6 736 aa22.17■■□□□ 1.14
ABCD4-219ENST00000553745 DISP1Q96F81 1524 aa22.17■■□□□ 1.14
ABCD4-219ENST00000553745 SHROOM2Q13796 1616 aa22.16■■□□□ 1.14
ABCD4-219ENST00000553745 JPH4Q96JJ6 628 aa22.1■■□□□ 1.13
ABCD4-219ENST00000553745 PCF11O94913 1555 aaKnown RBP22.1■■□□□ 1.13
ABCD4-219ENST00000553745 FMN1Q68DA7 1419 aa22.05■■□□□ 1.12
ABCD4-219ENST00000553745 CARMIL2Q6F5E8 1435 aa22.05■■□□□ 1.12
ABCD4-219ENST00000553745 HRCP23327 699 aa22.04■■□□□ 1.12
ABCD4-219ENST00000553745 PRG4Q92954 1404 aaPredicted RBP22.04■■□□□ 1.12
ABCD4-219ENST00000553745 TRIM26Q12899 539 aaPredicted RBP22.02■■□□□ 1.12
ABCD4-219ENST00000553745 ERCC6L2Q5T890 1561 aa22.02■■□□□ 1.12
ABCD4-219ENST00000553745 FYCO1Q9BQS8 1478 aa22■■□□□ 1.11
ABCD4-219ENST00000553745 OSCARQ8IYS5 282 aa21.99■■□□□ 1.11
ABCD4-219ENST00000553745 CASKIN1Q8WXD9 1431 aa21.98■■□□□ 1.11
ABCD4-219ENST00000553745 LRRIQ1Q96JM4 1722 aa21.97■■□□□ 1.11
ABCD4-219ENST00000553745 CFAP43Q8NDM7 1665 aa21.95■■□□□ 1.1
ABCD4-219ENST00000553745 TTBK1Q5TCY1 1321 aaPredicted RBP21.94■■□□□ 1.1
ABCD4-219ENST00000553745 HECW1Q76N89 1606 aa21.94■■□□□ 1.1
ABCD4-219ENST00000553745 RAPGEF6Q8TEU7 1601 aa21.94■■□□□ 1.1
ABCD4-219ENST00000553745 TIAM1Q13009 1591 aa21.91■■□□□ 1.1
ABCD4-219ENST00000553745 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.1
ABCD4-219ENST00000553745 PLB1Q6P1J6 1458 aa21.87■■□□□ 1.09
ABCD4-219ENST00000553745 APLP2Q06481 763 aa21.87■■□□□ 1.09
ABCD4-219ENST00000553745 MAP3K1Q13233 1512 aa21.87■■□□□ 1.09
ABCD4-219ENST00000553745 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
ABCD4-219ENST00000553745 ABCA8O94911 1581 aa21.86■■□□□ 1.09
ABCD4-219ENST00000553745 PTPRGP23470 1445 aa21.85■■□□□ 1.09
ABCD4-219ENST00000553745 NUP153P49790 1475 aaKnown RBP21.83■■□□□ 1.09
ABCD4-219ENST00000553745 CCDC18Q5T9S5 1454 aa21.82■■□□□ 1.08
ABCD4-219ENST00000553745 EPRSP07814 1512 aaKnown RBP21.81■■□□□ 1.08
ABCD4-219ENST00000553745 CDK13Q14004 1512 aaKnown RBP21.81■■□□□ 1.08
ABCD4-219ENST00000553745 KANK4Q5T7N3 995 aaPredicted RBP21.77■■□□□ 1.08
ABCD4-219ENST00000553745 LRRC9Q6ZRR7 1453 aa21.77■■□□□ 1.08
ABCD4-219ENST00000553745 UACAQ9BZF9 1416 aa21.75■■□□□ 1.07
ABCD4-219ENST00000553745 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
ABCD4-219ENST00000553745 ABCC2Q92887 1545 aa21.74■■□□□ 1.07
ABCD4-219ENST00000553745 ARID3CA6NKF2 412 aa21.73■■□□□ 1.07
ABCD4-219ENST00000553745 MAGI3Q5TCQ9 1506 aa21.72■■□□□ 1.07
ABCD4-219ENST00000553745 EHBP1L1Q8N3D4 1523 aa21.7■■□□□ 1.07
ABCD4-219ENST00000553745 RIMBP3CA6NJZ7 1639 aa21.69■■□□□ 1.06
ABCD4-219ENST00000553745 RIMBP3BA6NNM3 1639 aa21.69■■□□□ 1.06
ABCD4-219ENST00000553745 RIMBP3Q9UFD9 1639 aa21.69■■□□□ 1.06
ABCD4-219ENST00000553745 ADCY10Q96PN6 1610 aa21.68■■□□□ 1.06
ABCD4-219ENST00000553745 UHRF1BP1LA0JNW5 1464 aa21.67■■□□□ 1.06
ABCD4-219ENST00000553745 MTUS2Q5JR59 1369 aa21.67■■□□□ 1.06
ABCD4-219ENST00000553745 ATP10BO94823 1461 aa21.66■■□□□ 1.06
ABCD4-219ENST00000553745 SUPT6HQ7KZ85 1726 aaKnown RBP21.64■■□□□ 1.05
ABCD4-219ENST00000553745 ZCCHC11Q5TAX3 1644 aaKnown RBP21.64■■□□□ 1.05
ABCD4-219ENST00000553745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.61■■□□□ 1.05
ABCD4-219ENST00000553745 HNRNPUL2Q1KMD3 747 aaKnown RBP21.61■■□□□ 1.05
ABCD4-219ENST00000553745 KDM5BQ9UGL1 1544 aa21.59■■□□□ 1.05
ABCD4-219ENST00000553745 NCOA2Q15596 1464 aa21.56■■□□□ 1.04
ABCD4-219ENST00000553745 TROQ12816 1431 aaPredicted RBP21.56■■□□□ 1.04
ABCD4-219ENST00000553745 KIF14Q15058 1648 aa21.55■■□□□ 1.04
ABCD4-219ENST00000553745 PHLDB1Q86UU1 1377 aa21.55■■□□□ 1.04
ABCD4-219ENST00000553745 CDK11AQ9UQ88 783 aaPredicted RBP21.54■■□□□ 1.04
ABCD4-219ENST00000553745 RRBP1Q9P2E9 1410 aaKnown RBP21.49■■□□□ 1.03
ABCD4-219ENST00000553745 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
ABCD4-219ENST00000553745 MYOM3Q5VTT5 1437 aa21.45■■□□□ 1.02
ABCD4-219ENST00000553745 CYB5RLQ6IPT4 315 aa21.44■■□□□ 1.02
ABCD4-219ENST00000553745 ITSN2Q9NZM3 1697 aa21.43■■□□□ 1.02
ABCD4-219ENST00000553745 FGD6Q6ZV73 1430 aa21.42■■□□□ 1.02
ABCD4-219ENST00000553745 CCNB3Q8WWL7 1395 aa21.42■■□□□ 1.02
ABCD4-219ENST00000553745 CDC42BPAQ5VT25 1732 aa21.42■■□□□ 1.02
ABCD4-219ENST00000553745 ABCC10Q5T3U5 1492 aa21.42■■□□□ 1.02
ABCD4-219ENST00000553745 ZEB1P37275 1124 aaPredicted RBP21.41■■□□□ 1.02
ABCD4-219ENST00000553745 TTC37Q6PGP7 1564 aa21.4■■□□□ 1.02
ABCD4-219ENST00000553745 WDR7Q9Y4E6 1490 aa21.4■■□□□ 1.02
ABCD4-219ENST00000553745 PTPN23Q9H3S7 1636 aa21.38■■□□□ 1.01
ABCD4-219ENST00000553745 ASXL2Q76L83 1435 aa21.38■■□□□ 1.01
ABCD4-219ENST00000553745 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.38■■□□□ 1.01
ABCD4-219ENST00000553745 GPATCH8Q9UKJ3 1502 aaKnown RBP21.35■■□□□ 1.01
ABCD4-219ENST00000553745 PREX2Q70Z35 1606 aa21.35■■□□□ 1.01
ABCD4-219ENST00000553745 NPM1P06748 294 aaKnown RBP eCLIP21.35■■□□□ 1.01
ABCD4-219ENST00000553745 MYO5CQ9NQX4 1742 aa21.34■■□□□ 1.01
ABCD4-219ENST00000553745 MIA2Q96PC5 1412 aa21.33■■□□□ 1.01
ABCD4-219ENST00000553745 CDC42BPBQ9Y5S2 1711 aa21.33■■□□□ 1
ABCD4-219ENST00000553745 MAPKBP1O60336 1514 aa21.33■■□□□ 1
ABCD4-219ENST00000553745 TCOF1Q13428 1488 aaKnown RBP21.32■■□□□ 1
ABCD4-219ENST00000553745 KCNH8Q96L42 1107 aa21.31■■□□□ 1
ABCD4-219ENST00000553745 ABCA9Q8IUA7 1624 aa21.29■■□□□ 1
ABCD4-219ENST00000553745 FAM50AQ14320 339 aaKnown RBP21.29■■□□□ 1
ABCD4-219ENST00000553745 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms