RNA–Protein interactions for RNA: ENST00000553621.1

AC004817.1-201, humanhuman

TSL 4 BASIC

Gene AC004817.1, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004817.1-201ENST00000553621 FHAD1B1AJZ9 1412 aa13.74□□□□□ -0.21
AC004817.1-201ENST00000553621 NUP160Q12769 1436 aa13.73□□□□□ -0.21
AC004817.1-201ENST00000553621 ERICH3Q5RHP9 1530 aa13.7□□□□□ -0.22
AC004817.1-201ENST00000553621 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
AC004817.1-201ENST00000553621 PPP6R1Q9UPN7 881 aa13.68□□□□□ -0.22
AC004817.1-201ENST00000553621 SHROOM2Q13796 1616 aa13.64□□□□□ -0.23
AC004817.1-201ENST00000553621 PRG4Q92954 1404 aaPredicted RBP13.64□□□□□ -0.23
AC004817.1-201ENST00000553621 RUSC2Q8N2Y8 1516 aa13.6□□□□□ -0.23
AC004817.1-201ENST00000553621 ADRA2BP18089 450 aa13.6□□□□□ -0.23
AC004817.1-201ENST00000553621 JPH4Q96JJ6 628 aa13.6□□□□□ -0.23
AC004817.1-201ENST00000553621 KIF27Q86VH2 1401 aa13.58□□□□□ -0.24
AC004817.1-201ENST00000553621 IGF1RP08069 1367 aa13.58□□□□□ -0.24
AC004817.1-201ENST00000553621 TTBK1Q5TCY1 1321 aaPredicted RBP13.53□□□□□ -0.24
AC004817.1-201ENST00000553621 CUL7Q14999 1698 aa13.5□□□□□ -0.25
AC004817.1-201ENST00000553621 KIAA0586Q9BVV6 1533 aa13.5□□□□□ -0.25
AC004817.1-201ENST00000553621 CARMIL1Q5VZK9 1371 aa13.49□□□□□ -0.25
AC004817.1-201ENST00000553621 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
AC004817.1-201ENST00000553621 ADCY10Q96PN6 1610 aa13.46□□□□□ -0.26
AC004817.1-201ENST00000553621 FAM69CQ0P6D2 419 aa13.45□□□□□ -0.26
AC004817.1-201ENST00000553621 KIF13AQ9H1H9 1805 aa13.42□□□□□ -0.26
AC004817.1-201ENST00000553621 ABCC10Q5T3U5 1492 aa13.42□□□□□ -0.26
AC004817.1-201ENST00000553621 PTPRGP23470 1445 aa13.41□□□□□ -0.26
AC004817.1-201ENST00000553621 MAPKBP1O60336 1514 aa13.4□□□□□ -0.26
AC004817.1-201ENST00000553621 IQGAP2Q13576 1575 aa13.39□□□□□ -0.27
AC004817.1-201ENST00000553621 DIP2BQ9P265 1576 aa13.39□□□□□ -0.27
AC004817.1-201ENST00000553621 TNIKQ9UKE5 1360 aa13.38□□□□□ -0.27
AC004817.1-201ENST00000553621 CARMIL2Q6F5E8 1435 aa13.38□□□□□ -0.27
AC004817.1-201ENST00000553621 RAPGEF2Q9Y4G8 1499 aa13.36□□□□□ -0.27
AC004817.1-201ENST00000553621 DISP1Q96F81 1524 aa13.34□□□□□ -0.27
AC004817.1-201ENST00000553621 ABCC2Q92887 1545 aa13.32□□□□□ -0.28
AC004817.1-201ENST00000553621 UACAQ9BZF9 1416 aa13.3□□□□□ -0.28
AC004817.1-201ENST00000553621 ASXL2Q76L83 1435 aa13.3□□□□□ -0.28
AC004817.1-201ENST00000553621 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
AC004817.1-201ENST00000553621 KIAA0556O60303 1618 aa13.28□□□□□ -0.28
AC004817.1-201ENST00000553621 KDM6BO15054 1643 aa13.28□□□□□ -0.28
AC004817.1-201ENST00000553621 UHRF1BP1LA0JNW5 1464 aa13.27□□□□□ -0.29
AC004817.1-201ENST00000553621 TSPOAP1O95153 1857 aa13.27□□□□□ -0.29
AC004817.1-201ENST00000553621 PLB1Q6P1J6 1458 aa13.25□□□□□ -0.29
AC004817.1-201ENST00000553621 KDM5BQ9UGL1 1544 aa13.23□□□□□ -0.29
AC004817.1-201ENST00000553621 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
AC004817.1-201ENST00000553621 ZCCHC11Q5TAX3 1644 aaKnown RBP13.21□□□□□ -0.29
AC004817.1-201ENST00000553621 EPRSP07814 1512 aaKnown RBP13.21□□□□□ -0.29
AC004817.1-201ENST00000553621 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.3
AC004817.1-201ENST00000553621 GLI2P10070 1586 aa13.2□□□□□ -0.3
AC004817.1-201ENST00000553621 ARID3CA6NKF2 412 aa13.2□□□□□ -0.3
AC004817.1-201ENST00000553621 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
AC004817.1-201ENST00000553621 PPRC1Q5VV67 1664 aaKnown RBP13.19□□□□□ -0.3
AC004817.1-201ENST00000553621 KDM4FA0A1W2PPD8 638 aa13.18□□□□□ -0.3
AC004817.1-201ENST00000553621 GOLGA3Q08378 1498 aa13.17□□□□□ -0.3
AC004817.1-201ENST00000553621 COL17A1Q9UMD9 1497 aaPredicted RBP13.16□□□□□ -0.3
AC004817.1-201ENST00000553621 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
AC004817.1-201ENST00000553621 RANGAP1P46060 587 aaPredicted RBP13.15□□□□□ -0.3
AC004817.1-201ENST00000553621 ABCA8O94911 1581 aa13.15□□□□□ -0.3
AC004817.1-201ENST00000553621 MAP3K4Q9Y6R4 1608 aa13.14□□□□□ -0.31
AC004817.1-201ENST00000553621 FAM9AQ8IZU1 332 aaPredicted RBP13.14□□□□□ -0.31
AC004817.1-201ENST00000553621 KCNH8Q96L42 1107 aa13.14□□□□□ -0.31
AC004817.1-201ENST00000553621 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
AC004817.1-201ENST00000553621 TEX14Q8IWB6 1497 aa13.11□□□□□ -0.31
AC004817.1-201ENST00000553621 CD109Q6YHK3 1445 aa13.08□□□□□ -0.32
AC004817.1-201ENST00000553621 EHMT2Q96KQ7 1210 aa13.08□□□□□ -0.32
AC004817.1-201ENST00000553621 ADGRL1O94910 1474 aa13.07□□□□□ -0.32
AC004817.1-201ENST00000553621 FHOD3Q2V2M9 1422 aa13.05□□□□□ -0.32
AC004817.1-201ENST00000553621 ATP10BO94823 1461 aa13.05□□□□□ -0.32
AC004817.1-201ENST00000553621 SAMD9Q5K651 1589 aa13.05□□□□□ -0.32
AC004817.1-201ENST00000553621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.04□□□□□ -0.32
AC004817.1-201ENST00000553621 HNRNPUL2Q1KMD3 747 aaKnown RBP13.04□□□□□ -0.32
AC004817.1-201ENST00000553621 MAGI3Q5TCQ9 1506 aa13.03□□□□□ -0.32
AC004817.1-201ENST00000553621 EEA1Q15075 1411 aa13.03□□□□□ -0.32
AC004817.1-201ENST00000553621 CFAP43Q8NDM7 1665 aa13.02□□□□□ -0.33
AC004817.1-201ENST00000553621 RAPGEF6Q8TEU7 1601 aa13.01□□□□□ -0.33
AC004817.1-201ENST00000553621 NUP153P49790 1475 aaKnown RBP12.99□□□□□ -0.33
AC004817.1-201ENST00000553621 KIF21BO75037 1637 aa12.95□□□□□ -0.34
AC004817.1-201ENST00000553621 ABCA9Q8IUA7 1624 aa12.95□□□□□ -0.34
AC004817.1-201ENST00000553621 RAPGEF3O95398 923 aa12.94□□□□□ -0.34
AC004817.1-201ENST00000553621 UBTFP17480 764 aaKnown RBP12.92□□□□□ -0.34
AC004817.1-201ENST00000553621 ARAP3Q8WWN8 1544 aa12.92□□□□□ -0.34
AC004817.1-201ENST00000553621 EFCAB5A4FU69 1503 aa12.91□□□□□ -0.34
AC004817.1-201ENST00000553621 CDK13Q14004 1512 aaKnown RBP12.9□□□□□ -0.34
AC004817.1-201ENST00000553621 ATP1B4Q9UN42 357 aaPredicted RBP12.9□□□□□ -0.34
AC004817.1-201ENST00000553621 PLEKHD1A6NEE1 506 aa12.89□□□□□ -0.35
AC004817.1-201ENST00000553621 NEO1Q92859 1461 aa12.88□□□□□ -0.35
AC004817.1-201ENST00000553621 HECW2Q9P2P5 1572 aa12.88□□□□□ -0.35
AC004817.1-201ENST00000553621 FRMPD1Q5SYB0 1578 aa12.87□□□□□ -0.35
AC004817.1-201ENST00000553621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.86□□□□□ -0.35
AC004817.1-201ENST00000553621 TTC37Q6PGP7 1564 aa12.86□□□□□ -0.35
AC004817.1-201ENST00000553621 ARHGAP35Q9NRY4 1499 aa12.85□□□□□ -0.35
AC004817.1-201ENST00000553621 PHLDB1Q86UU1 1377 aa12.85□□□□□ -0.35
AC004817.1-201ENST00000553621 ARID4BQ4LE39 1312 aaPredicted RBP12.84□□□□□ -0.35
AC004817.1-201ENST00000553621 FANCAO15360 1455 aa12.84□□□□□ -0.35
AC004817.1-201ENST00000553621 AKNAQ7Z591 1439 aa12.83□□□□□ -0.36
AC004817.1-201ENST00000553621 DENND4BO75064 1496 aaPredicted RBP12.83□□□□□ -0.36
AC004817.1-201ENST00000553621 FMN1Q68DA7 1419 aa12.8□□□□□ -0.36
AC004817.1-201ENST00000553621 HECW1Q76N89 1606 aa12.8□□□□□ -0.36
AC004817.1-201ENST00000553621 PTPRMP28827 1452 aa12.79□□□□□ -0.36
AC004817.1-201ENST00000553621 ARHGEF40Q8TER5 1519 aa12.79□□□□□ -0.36
AC004817.1-201ENST00000553621 ILDR1Q86SU0 546 aaPredicted RBP12.79□□□□□ -0.36
AC004817.1-201ENST00000553621 YEATS2Q9ULM3 1422 aa12.79□□□□□ -0.36
AC004817.1-201ENST00000553621 CFAP74Q9C0B2 1584 aa12.77□□□□□ -0.36
AC004817.1-201ENST00000553621 MADDQ8WXG6 1647 aa12.77□□□□□ -0.36
AC004817.1-201ENST00000553621 ADAMTSL3P82987 1691 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms