RNA–Protein interactions for RNA: ENST00000553621.1

AC004817.1-201, humanhuman

TSL 4 BASIC

Gene AC004817.1, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004817.1-201ENST00000553621 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
AC004817.1-201ENST00000553621 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
AC004817.1-201ENST00000553621 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
AC004817.1-201ENST00000553621 ABCC9O60706 1549 aa17.47■□□□□ 0.39
AC004817.1-201ENST00000553621 CCDC180Q9P1Z9 1646 aa17.34■□□□□ 0.37
AC004817.1-201ENST00000553621 RB1CC1Q8TDY2 1594 aa16.54■□□□□ 0.24
AC004817.1-201ENST00000553621 DCAF8L2P0C7V8 631 aa16.5■□□□□ 0.23
AC004817.1-201ENST00000553621 NACADO15069 1562 aa16.41■□□□□ 0.22
AC004817.1-201ENST00000553621 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
AC004817.1-201ENST00000553621 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
AC004817.1-201ENST00000553621 SENP3Q9H4L4 574 aaPredicted RBP16.15■□□□□ 0.18
AC004817.1-201ENST00000553621 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.17
AC004817.1-201ENST00000553621 UNC13AQ9UPW8 1703 aa16.13■□□□□ 0.17
AC004817.1-201ENST00000553621 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
AC004817.1-201ENST00000553621 BICRAQ9NZM4 1560 aa16.09■□□□□ 0.17
AC004817.1-201ENST00000553621 DCAF1Q9Y4B6 1507 aa15.96■□□□□ 0.15
AC004817.1-201ENST00000553621 SCRIBQ14160 1630 aa15.94■□□□□ 0.14
AC004817.1-201ENST00000553621 PHF23Q9BUL5 403 aaPredicted RBP15.84■□□□□ 0.13
AC004817.1-201ENST00000553621 SHROOM4Q9ULL8 1493 aa15.78■□□□□ 0.12
AC004817.1-201ENST00000553621 CC2D2AQ9P2K1 1620 aa15.72■□□□□ 0.11
AC004817.1-201ENST00000553621 CECR2Q9BXF3 1484 aa15.7■□□□□ 0.1
AC004817.1-201ENST00000553621 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
AC004817.1-201ENST00000553621 NCAPD3P42695 1498 aa15.17■□□□□ 0.02
AC004817.1-201ENST00000553621 ATAD2BQ9ULI0 1458 aa15.16■□□□□ 0.02
AC004817.1-201ENST00000553621 SMARCA4P51532 1647 aa15.14■□□□□ 0.01
AC004817.1-201ENST00000553621 SMARCA2P51531 1590 aa15.07■□□□□ 0
AC004817.1-201ENST00000553621 FOXD1Q16676 465 aa15.06■□□□□ 0
AC004817.1-201ENST00000553621 ERCC6Q03468 1493 aa15.06■□□□□ 0
AC004817.1-201ENST00000553621 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
AC004817.1-201ENST00000553621 HMGXB3Q12766 1538 aa15.05■□□□□ -0
AC004817.1-201ENST00000553621 BAZ1BQ9UIG0 1483 aaKnown RBP15.03■□□□□ -0
AC004817.1-201ENST00000553621 NESP48681 1621 aa15.02□□□□□ -0.01
AC004817.1-201ENST00000553621 MROH2BQ7Z745 1585 aa15.01□□□□□ -0.01
AC004817.1-201ENST00000553621 CUX2O14529 1486 aa14.95□□□□□ -0.02
AC004817.1-201ENST00000553621 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
AC004817.1-201ENST00000553621 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
AC004817.1-201ENST00000553621 LAMC3Q9Y6N6 1575 aa14.81□□□□□ -0.04
AC004817.1-201ENST00000553621 WIZO95785 1651 aa14.81□□□□□ -0.04
AC004817.1-201ENST00000553621 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
AC004817.1-201ENST00000553621 POTEDQ86YR6 584 aa14.79□□□□□ -0.04
AC004817.1-201ENST00000553621 KIF21AQ7Z4S6 1674 aa14.75□□□□□ -0.05
AC004817.1-201ENST00000553621 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
AC004817.1-201ENST00000553621 CADPSQ9ULU8 1353 aa14.73□□□□□ -0.05
AC004817.1-201ENST00000553621 RSF1Q96T23 1441 aaPredicted RBP14.69□□□□□ -0.06
AC004817.1-201ENST00000553621 MRC2Q9UBG0 1479 aa14.65□□□□□ -0.06
AC004817.1-201ENST00000553621 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
AC004817.1-201ENST00000553621 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
AC004817.1-201ENST00000553621 WDR62O43379 1518 aa14.6□□□□□ -0.07
AC004817.1-201ENST00000553621 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
AC004817.1-201ENST00000553621 CFTRP13569 1480 aa14.57□□□□□ -0.08
AC004817.1-201ENST00000553621 URB2Q14146 1524 aaKnown RBP14.48□□□□□ -0.09
AC004817.1-201ENST00000553621 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.09
AC004817.1-201ENST00000553621 TRIM41Q8WV44 630 aa14.42□□□□□ -0.1
AC004817.1-201ENST00000553621 MSH5O43196 834 aa14.36□□□□□ -0.11
AC004817.1-201ENST00000553621 PRDM2Q13029 1718 aa14.32□□□□□ -0.12
AC004817.1-201ENST00000553621 ZNF608Q9ULD9 1512 aaPredicted RBP14.32□□□□□ -0.12
AC004817.1-201ENST00000553621 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
AC004817.1-201ENST00000553621 OSCARQ8IYS5 282 aa14.29□□□□□ -0.12
AC004817.1-201ENST00000553621 IFT140Q96RY7 1462 aa14.29□□□□□ -0.12
AC004817.1-201ENST00000553621 DNMBPQ6XZF7 1577 aa14.24□□□□□ -0.13
AC004817.1-201ENST00000553621 EIF4G3O43432 1585 aaKnown RBP14.22□□□□□ -0.13
AC004817.1-201ENST00000553621 ABCC8Q09428 1581 aa14.2□□□□□ -0.14
AC004817.1-201ENST00000553621 AQRO60306 1485 aaKnown RBP eCLIP14.19□□□□□ -0.14
AC004817.1-201ENST00000553621 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
AC004817.1-201ENST00000553621 RAD54L2Q9Y4B4 1467 aa14.17□□□□□ -0.14
AC004817.1-201ENST00000553621 TARBP1Q13395 1621 aaKnown RBP14.15□□□□□ -0.14
AC004817.1-201ENST00000553621 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
AC004817.1-201ENST00000553621 RIMBP3CA6NJZ7 1639 aa14.13□□□□□ -0.15
AC004817.1-201ENST00000553621 RIMBP3BA6NNM3 1639 aa14.13□□□□□ -0.15
AC004817.1-201ENST00000553621 RIMBP3Q9UFD9 1639 aa14.13□□□□□ -0.15
AC004817.1-201ENST00000553621 FBLN2P98095 1184 aa14.13□□□□□ -0.15
AC004817.1-201ENST00000553621 TDRD9Q8NDG6 1382 aaKnown RBP14.11□□□□□ -0.15
AC004817.1-201ENST00000553621 SOGA1O94964 1423 aa14.11□□□□□ -0.15
AC004817.1-201ENST00000553621 FGD5Q6ZNL6 1462 aa14.11□□□□□ -0.15
AC004817.1-201ENST00000553621 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
AC004817.1-201ENST00000553621 CUX1P39880 1505 aa14.09□□□□□ -0.15
AC004817.1-201ENST00000553621 CHD1O14646 1710 aa14.07□□□□□ -0.16
AC004817.1-201ENST00000553621 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
AC004817.1-201ENST00000553621 CYB5RLQ6IPT4 315 aa14.02□□□□□ -0.17
AC004817.1-201ENST00000553621 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
AC004817.1-201ENST00000553621 CHMP7Q8WUX9 453 aaPredicted RBP13.97□□□□□ -0.17
AC004817.1-201ENST00000553621 GRIN2BQ13224 1484 aa13.97□□□□□ -0.17
AC004817.1-201ENST00000553621 PIAS4Q8N2W9 510 aaPredicted RBP13.95□□□□□ -0.18
AC004817.1-201ENST00000553621 MAGI1Q96QZ7 1491 aaPredicted RBP13.94□□□□□ -0.18
AC004817.1-201ENST00000553621 WDR97A6NE52 1622 aa13.94□□□□□ -0.18
AC004817.1-201ENST00000553621 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
AC004817.1-201ENST00000553621 CLASP1Q7Z460 1538 aa13.92□□□□□ -0.18
AC004817.1-201ENST00000553621 SYNJ2O15056 1496 aa13.91□□□□□ -0.18
AC004817.1-201ENST00000553621 SYNJ1O43426 1573 aa13.91□□□□□ -0.18
AC004817.1-201ENST00000553621 ABCA10Q8WWZ4 1543 aa13.9□□□□□ -0.18
AC004817.1-201ENST00000553621 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
AC004817.1-201ENST00000553621 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
AC004817.1-201ENST00000553621 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
AC004817.1-201ENST00000553621 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
AC004817.1-201ENST00000553621 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
AC004817.1-201ENST00000553621 BIVM-ERCC5R4GMW8 1640 aa13.81□□□□□ -0.2
AC004817.1-201ENST00000553621 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
AC004817.1-201ENST00000553621 ADAMTS12P58397 1594 aa13.8□□□□□ -0.2
AC004817.1-201ENST00000553621 ERCC6L2Q5T890 1561 aa13.78□□□□□ -0.2
AC004817.1-201ENST00000553621 CEP170Q5SW79 1584 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 166.5 ms