RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 RANGAP1P46060 587 aaPredicted RBP21.89■■□□□ 1.09
APEX1-205ENST00000553555 FBLN2P98095 1184 aa21.89■■□□□ 1.09
APEX1-205ENST00000553555 CHD1O14646 1710 aa21.87■■□□□ 1.09
APEX1-205ENST00000553555 CEP170Q5SW79 1584 aa21.83■■□□□ 1.09
APEX1-205ENST00000553555 KIAA0586Q9BVV6 1533 aa21.82■■□□□ 1.08
APEX1-205ENST00000553555 NUP160Q12769 1436 aa21.81■■□□□ 1.08
APEX1-205ENST00000553555 ARHGAP35Q9NRY4 1499 aa21.81■■□□□ 1.08
APEX1-205ENST00000553555 IQGAP2Q13576 1575 aa21.81■■□□□ 1.08
APEX1-205ENST00000553555 ARAP1Q96P48 1450 aa21.76■■□□□ 1.07
APEX1-205ENST00000553555 EFCAB5A4FU69 1503 aa21.75■■□□□ 1.07
APEX1-205ENST00000553555 SAMD9Q5K651 1589 aa21.73■■□□□ 1.07
APEX1-205ENST00000553555 UGGT2Q9NYU1 1516 aa21.71■■□□□ 1.07
APEX1-205ENST00000553555 VPS8Q8N3P4 1428 aa21.71■■□□□ 1.07
APEX1-205ENST00000553555 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
APEX1-205ENST00000553555 FHOD3Q2V2M9 1422 aa21.64■■□□□ 1.06
APEX1-205ENST00000553555 JPH4Q96JJ6 628 aa21.64■■□□□ 1.05
APEX1-205ENST00000553555 DISP1Q96F81 1524 aa21.61■■□□□ 1.05
APEX1-205ENST00000553555 KIAA0556O60303 1618 aa21.6■■□□□ 1.05
APEX1-205ENST00000553555 CLASP1Q7Z460 1538 aa21.59■■□□□ 1.05
APEX1-205ENST00000553555 SHROOM2Q13796 1616 aa21.58■■□□□ 1.04
APEX1-205ENST00000553555 FMN1Q68DA7 1419 aa21.55■■□□□ 1.04
APEX1-205ENST00000553555 CARMIL2Q6F5E8 1435 aa21.55■■□□□ 1.04
APEX1-205ENST00000553555 PRG4Q92954 1404 aaPredicted RBP21.51■■□□□ 1.03
APEX1-205ENST00000553555 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
APEX1-205ENST00000553555 PCF11O94913 1555 aaKnown RBP21.49■■□□□ 1.03
APEX1-205ENST00000553555 CASKIN1Q8WXD9 1431 aa21.48■■□□□ 1.03
APEX1-205ENST00000553555 APLP2Q06481 763 aa21.47■■□□□ 1.03
APEX1-205ENST00000553555 FYCO1Q9BQS8 1478 aa21.46■■□□□ 1.03
APEX1-205ENST00000553555 PPARGC1BQ86YN6 1023 aaKnown RBP21.44■■□□□ 1.02
APEX1-205ENST00000553555 ERCC6L2Q5T890 1561 aa21.41■■□□□ 1.02
APEX1-205ENST00000553555 MAP3K1Q13233 1512 aa21.41■■□□□ 1.02
APEX1-205ENST00000553555 ATP1B4Q9UN42 357 aaPredicted RBP21.4■■□□□ 1.02
APEX1-205ENST00000553555 TTBK1Q5TCY1 1321 aaPredicted RBP21.4■■□□□ 1.02
APEX1-205ENST00000553555 LRRIQ1Q96JM4 1722 aa21.39■■□□□ 1.02
APEX1-205ENST00000553555 TIAM1Q13009 1591 aa21.37■■□□□ 1.01
APEX1-205ENST00000553555 HECW1Q76N89 1606 aa21.37■■□□□ 1.01
APEX1-205ENST00000553555 RAPGEF6Q8TEU7 1601 aa21.37■■□□□ 1.01
APEX1-205ENST00000553555 CFAP43Q8NDM7 1665 aa21.36■■□□□ 1.01
APEX1-205ENST00000553555 PTPRGP23470 1445 aa21.36■■□□□ 1.01
APEX1-205ENST00000553555 KANK4Q5T7N3 995 aaPredicted RBP21.33■■□□□ 1
APEX1-205ENST00000553555 PLB1Q6P1J6 1458 aa21.32■■□□□ 1
APEX1-205ENST00000553555 ABCA8O94911 1581 aa21.32■■□□□ 1
APEX1-205ENST00000553555 CCDC18Q5T9S5 1454 aa21.29■■□□□ 1
APEX1-205ENST00000553555 EPRSP07814 1512 aaKnown RBP21.29■■□□□ 1
APEX1-205ENST00000553555 NUP153P49790 1475 aaKnown RBP21.28■■□□□ 1
APEX1-205ENST00000553555 LRRC9Q6ZRR7 1453 aa21.27■■□□□ 1
APEX1-205ENST00000553555 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
APEX1-205ENST00000553555 UACAQ9BZF9 1416 aa21.24■□□□□ 0.99
APEX1-205ENST00000553555 CDK13Q14004 1512 aaKnown RBP21.23■□□□□ 0.99
APEX1-205ENST00000553555 ARID3CA6NKF2 412 aa21.2■□□□□ 0.98
APEX1-205ENST00000553555 ABCC2Q92887 1545 aa21.18■□□□□ 0.98
APEX1-205ENST00000553555 MTUS2Q5JR59 1369 aa21.17■□□□□ 0.98
APEX1-205ENST00000553555 MAGI3Q5TCQ9 1506 aa21.16■□□□□ 0.98
APEX1-205ENST00000553555 ATP10BO94823 1461 aa21.16■□□□□ 0.98
APEX1-205ENST00000553555 UHRF1BP1LA0JNW5 1464 aa21.15■□□□□ 0.98
APEX1-205ENST00000553555 EHBP1L1Q8N3D4 1523 aa21.15■□□□□ 0.98
APEX1-205ENST00000553555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.15■□□□□ 0.98
APEX1-205ENST00000553555 HNRNPUL2Q1KMD3 747 aaKnown RBP21.15■□□□□ 0.98
APEX1-205ENST00000553555 PCGF6Q9BYE7 350 aa21.15■□□□□ 0.98
APEX1-205ENST00000553555 ARHGEF11O15085 1522 aa21.14■□□□□ 0.98
APEX1-205ENST00000553555 CDK11AQ9UQ88 783 aaPredicted RBP21.13■□□□□ 0.97
APEX1-205ENST00000553555 SUPT6HQ7KZ85 1726 aaKnown RBP21.12■□□□□ 0.97
APEX1-205ENST00000553555 RIMBP3CA6NJZ7 1639 aa21.09■□□□□ 0.97
APEX1-205ENST00000553555 RIMBP3BA6NNM3 1639 aa21.09■□□□□ 0.97
APEX1-205ENST00000553555 ADCY10Q96PN6 1610 aa21.09■□□□□ 0.97
APEX1-205ENST00000553555 RIMBP3Q9UFD9 1639 aa21.09■□□□□ 0.97
APEX1-205ENST00000553555 KDM5BQ9UGL1 1544 aa21.06■□□□□ 0.96
APEX1-205ENST00000553555 PHLDB1Q86UU1 1377 aa21.06■□□□□ 0.96
APEX1-205ENST00000553555 ZCCHC11Q5TAX3 1644 aaKnown RBP21.05■□□□□ 0.96
APEX1-205ENST00000553555 TROQ12816 1431 aaPredicted RBP21.05■□□□□ 0.96
APEX1-205ENST00000553555 NCOA2Q15596 1464 aa21.05■□□□□ 0.96
APEX1-205ENST00000553555 PLEKHD1A6NEE1 506 aa21.05■□□□□ 0.96
APEX1-205ENST00000553555 RRBP1Q9P2E9 1410 aaKnown RBP21.02■□□□□ 0.96
APEX1-205ENST00000553555 KIF14Q15058 1648 aa20.97■□□□□ 0.95
APEX1-205ENST00000553555 MYOM3Q5VTT5 1437 aa20.96■□□□□ 0.95
APEX1-205ENST00000553555 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.94
APEX1-205ENST00000553555 CYB5RLQ6IPT4 315 aa20.94■□□□□ 0.94
APEX1-205ENST00000553555 FGD6Q6ZV73 1430 aa20.93■□□□□ 0.94
APEX1-205ENST00000553555 NPM1P06748 294 aaKnown RBP eCLIP20.91■□□□□ 0.94
APEX1-205ENST00000553555 ABCC10Q5T3U5 1492 aa20.9■□□□□ 0.94
APEX1-205ENST00000553555 ITSN2Q9NZM3 1697 aa20.87■□□□□ 0.93
APEX1-205ENST00000553555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.87■□□□□ 0.93
APEX1-205ENST00000553555 CDC42BPAQ5VT25 1732 aa20.87■□□□□ 0.93
APEX1-205ENST00000553555 MIA2Q96PC5 1412 aa20.87■□□□□ 0.93
APEX1-205ENST00000553555 PTPN23Q9H3S7 1636 aa20.86■□□□□ 0.93
APEX1-205ENST00000553555 GPATCH8Q9UKJ3 1502 aaKnown RBP20.86■□□□□ 0.93
APEX1-205ENST00000553555 KCNH8Q96L42 1107 aa20.86■□□□□ 0.93
APEX1-205ENST00000553555 WDR7Q9Y4E6 1490 aa20.85■□□□□ 0.93
APEX1-205ENST00000553555 FAM50AQ14320 339 aaKnown RBP20.85■□□□□ 0.93
APEX1-205ENST00000553555 ASXL2Q76L83 1435 aa20.84■□□□□ 0.93
APEX1-205ENST00000553555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.83■□□□□ 0.931e-5■■■■□ 25.8
APEX1-205ENST00000553555 TCOF1Q13428 1488 aaKnown RBP20.83■□□□□ 0.92
APEX1-205ENST00000553555 TTC37Q6PGP7 1564 aa20.81■□□□□ 0.92
APEX1-205ENST00000553555 CDC42BPBQ9Y5S2 1711 aa20.8■□□□□ 0.92
APEX1-205ENST00000553555 CFDP1Q9UEE9 299 aaPredicted RBP20.79■□□□□ 0.92
APEX1-205ENST00000553555 MYO5CQ9NQX4 1742 aa20.79■□□□□ 0.92
APEX1-205ENST00000553555 PREX2Q70Z35 1606 aa20.78■□□□□ 0.92
APEX1-205ENST00000553555 ITGAEP38570 1179 aa20.76■□□□□ 0.91
APEX1-205ENST00000553555 MAPKBP1O60336 1514 aa20.76■□□□□ 0.91
APEX1-205ENST00000553555 ABCA9Q8IUA7 1624 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms