RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TRIM26Q12899 539 aaPredicted RBP30.62■■■□□ 2.49
RBFOX1-215ENST00000553186 PCGF6Q9BYE7 350 aa30.62■■■□□ 2.49
RBFOX1-215ENST00000553186 MAGI1Q96QZ7 1491 aaPredicted RBP30.61■■■□□ 2.49
RBFOX1-215ENST00000553186 PPARGC1BQ86YN6 1023 aaKnown RBP30.61■■■□□ 2.49
RBFOX1-215ENST00000553186 GRIN2AQ12879 1464 aa30.51■■■□□ 2.48
RBFOX1-215ENST00000553186 SYNJ2O15056 1496 aa30.5■■■□□ 2.47
RBFOX1-215ENST00000553186 EFCAB5A4FU69 1503 aa30.5■■■□□ 2.47
RBFOX1-215ENST00000553186 CHMP7Q8WUX9 453 aaPredicted RBP30.44■■■□□ 2.46
RBFOX1-215ENST00000553186 P3H3Q8IVL6 736 aa30.42■■■□□ 2.46
RBFOX1-215ENST00000553186 IQGAP2Q13576 1575 aa30.41■■■□□ 2.46
RBFOX1-215ENST00000553186 FHOD3Q2V2M9 1422 aa30.41■■■□□ 2.46
RBFOX1-215ENST00000553186 SAMD9Q5K651 1589 aa30.4■■■□□ 2.46
RBFOX1-215ENST00000553186 KIAA0586Q9BVV6 1533 aa30.38■■■□□ 2.45
RBFOX1-215ENST00000553186 APLP2Q06481 763 aa30.38■■■□□ 2.45
RBFOX1-215ENST00000553186 FBLN2P98095 1184 aa30.35■■■□□ 2.45
RBFOX1-215ENST00000553186 TTBK1Q5TCY1 1321 aaPredicted RBP30.34■■■□□ 2.45
RBFOX1-215ENST00000553186 NUP160Q12769 1436 aa30.32■■■□□ 2.44
RBFOX1-215ENST00000553186 CEP170Q5SW79 1584 aa30.31■■■□□ 2.44
RBFOX1-215ENST00000553186 UGGT2Q9NYU1 1516 aa30.3■■■□□ 2.44
RBFOX1-215ENST00000553186 FMN1Q68DA7 1419 aa30.26■■■□□ 2.43
RBFOX1-215ENST00000553186 PCF11O94913 1555 aaKnown RBP30.23■■■□□ 2.43
RBFOX1-215ENST00000553186 CASKIN1Q8WXD9 1431 aa30.21■■■□□ 2.43
RBFOX1-215ENST00000553186 KANK4Q5T7N3 995 aaPredicted RBP30.21■■■□□ 2.43
RBFOX1-215ENST00000553186 MAP3K1Q13233 1512 aa30.2■■■□□ 2.42
RBFOX1-215ENST00000553186 FYCO1Q9BQS8 1478 aa30.19■■■□□ 2.42
RBFOX1-215ENST00000553186 DISP1Q96F81 1524 aa30.17■■■□□ 2.42
RBFOX1-215ENST00000553186 TIAM1Q13009 1591 aa30.13■■■□□ 2.41
RBFOX1-215ENST00000553186 KIAA0556O60303 1618 aa30.11■■■□□ 2.41
RBFOX1-215ENST00000553186 CHD1O14646 1710 aa30.1■■■□□ 2.41
RBFOX1-215ENST00000553186 JPH4Q96JJ6 628 aa30.1■■■□□ 2.41
RBFOX1-215ENST00000553186 ATP1B4Q9UN42 357 aaPredicted RBP30.07■■■□□ 2.4
RBFOX1-215ENST00000553186 CFAP43Q8NDM7 1665 aa30.03■■■□□ 2.4
RBFOX1-215ENST00000553186 LRRC9Q6ZRR7 1453 aa30.02■■■□□ 2.4
RBFOX1-215ENST00000553186 CARMIL2Q6F5E8 1435 aa29.97■■■□□ 2.39
RBFOX1-215ENST00000553186 LRRIQ1Q96JM4 1722 aa29.92■■■□□ 2.38
RBFOX1-215ENST00000553186 HECW1Q76N89 1606 aa29.89■■■□□ 2.38
RBFOX1-215ENST00000553186 PRG4Q92954 1404 aaPredicted RBP29.88■■■□□ 2.37
RBFOX1-215ENST00000553186 CCDC18Q5T9S5 1454 aa29.86■■■□□ 2.37
RBFOX1-215ENST00000553186 SHROOM2Q13796 1616 aa29.85■■■□□ 2.37
RBFOX1-215ENST00000553186 EPRSP07814 1512 aaKnown RBP29.84■■■□□ 2.37
RBFOX1-215ENST00000553186 RRBP1Q9P2E9 1410 aaKnown RBP29.84■■■□□ 2.37
RBFOX1-215ENST00000553186 CLASP1Q7Z460 1538 aa29.82■■■□□ 2.36
RBFOX1-215ENST00000553186 RAPGEF6Q8TEU7 1601 aa29.8■■■□□ 2.36
RBFOX1-215ENST00000553186 NUP153P49790 1475 aaKnown RBP29.8■■■□□ 2.36
RBFOX1-215ENST00000553186 MTUS2Q5JR59 1369 aa29.79■■■□□ 2.36
RBFOX1-215ENST00000553186 PHLDB1Q86UU1 1377 aa29.78■■■□□ 2.36
RBFOX1-215ENST00000553186 PLB1Q6P1J6 1458 aa29.78■■■□□ 2.36
RBFOX1-215ENST00000553186 CDK13Q14004 1512 aaKnown RBP29.76■■■□□ 2.35
RBFOX1-215ENST00000553186 MAGI3Q5TCQ9 1506 aa29.74■■■□□ 2.35
RBFOX1-215ENST00000553186 CCNB3Q8WWL7 1395 aa29.73■■■□□ 2.35
RBFOX1-215ENST00000553186 HRCP23327 699 aa29.73■■■□□ 2.35
RBFOX1-215ENST00000553186 EHBP1L1Q8N3D4 1523 aa29.72■■■□□ 2.35
RBFOX1-215ENST00000553186 ARID3CA6NKF2 412 aa29.7■■■□□ 2.34
RBFOX1-215ENST00000553186 PTPRGP23470 1445 aa29.7■■■□□ 2.34
RBFOX1-215ENST00000553186 ABCA8O94911 1581 aa29.69■■■□□ 2.34
RBFOX1-215ENST00000553186 HNRNPUL2Q1KMD3 747 aaKnown RBP29.68■■■□□ 2.34
RBFOX1-215ENST00000553186 ERCC6L2Q5T890 1561 aa29.67■■■□□ 2.34
RBFOX1-215ENST00000553186 NCOA2Q15596 1464 aa29.64■■■□□ 2.34
RBFOX1-215ENST00000553186 ARHGEF11O15085 1522 aa29.62■■■□□ 2.33
RBFOX1-215ENST00000553186 SUPT6HQ7KZ85 1726 aaKnown RBP29.61■■■□□ 2.33
RBFOX1-215ENST00000553186 CDK11AQ9UQ88 783 aaPredicted RBP29.55■■■□□ 2.32
RBFOX1-215ENST00000553186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.54■■■□□ 2.32
RBFOX1-215ENST00000553186 FGD6Q6ZV73 1430 aa29.54■■■□□ 2.32
RBFOX1-215ENST00000553186 OSCARQ8IYS5 282 aa29.54■■■□□ 2.32
RBFOX1-215ENST00000553186 ATP10BO94823 1461 aa29.53■■■□□ 2.32
RBFOX1-215ENST00000553186 MYOM3Q5VTT5 1437 aa29.53■■■□□ 2.32
RBFOX1-215ENST00000553186 UACAQ9BZF9 1416 aa29.53■■■□□ 2.32
RBFOX1-215ENST00000553186 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.52■■■□□ 2.32
RBFOX1-215ENST00000553186 TROQ12816 1431 aaPredicted RBP29.49■■■□□ 2.31
RBFOX1-215ENST00000553186 FAM50AQ14320 339 aaKnown RBP29.47■■■□□ 2.31
RBFOX1-215ENST00000553186 ITGAEP38570 1179 aa29.42■■■□□ 2.3
RBFOX1-215ENST00000553186 ABCC2Q92887 1545 aa29.42■■■□□ 2.3
RBFOX1-215ENST00000553186 PLEKHD1A6NEE1 506 aa29.39■■■□□ 2.29
RBFOX1-215ENST00000553186 CCER1Q8TC90 406 aaPredicted RBP29.37■■■□□ 2.29
RBFOX1-215ENST00000553186 MIA2Q96PC5 1412 aa29.37■■■□□ 2.29
RBFOX1-215ENST00000553186 UHRF1BP1LA0JNW5 1464 aa29.36■■■□□ 2.29
RBFOX1-215ENST00000553186 ADCY10Q96PN6 1610 aa29.35■■■□□ 2.29
RBFOX1-215ENST00000553186 PTPN23Q9H3S7 1636 aa29.34■■■□□ 2.29
RBFOX1-215ENST00000553186 TCOF1Q13428 1488 aaKnown RBP29.34■■■□□ 2.29
RBFOX1-215ENST00000553186 ZEB1P37275 1124 aaPredicted RBP29.33■■■□□ 2.29
RBFOX1-215ENST00000553186 KIF14Q15058 1648 aa29.33■■■□□ 2.29
RBFOX1-215ENST00000553186 KDM5BQ9UGL1 1544 aa29.26■■■□□ 2.27
RBFOX1-215ENST00000553186 ABCC10Q5T3U5 1492 aa29.25■■■□□ 2.27
RBFOX1-215ENST00000553186 PTPRKQ15262 1439 aa29.25■■■□□ 2.27
RBFOX1-215ENST00000553186 GPATCH8Q9UKJ3 1502 aaKnown RBP29.25■■■□□ 2.27
RBFOX1-215ENST00000553186 SETD5Q9C0A6 1442 aa29.19■■■□□ 2.26
RBFOX1-215ENST00000553186 ZCCHC11Q5TAX3 1644 aaKnown RBP29.18■■■□□ 2.26
RBFOX1-215ENST00000553186 RAB3GAP2Q9H2M9 1393 aa29.18■■■□□ 2.26
RBFOX1-215ENST00000553186 ITSN2Q9NZM3 1697 aa29.16■■■□□ 2.26
RBFOX1-215ENST00000553186 CFDP1Q9UEE9 299 aaPredicted RBP29.16■■■□□ 2.26
RBFOX1-215ENST00000553186 ZNF644Q9H582 1327 aaPredicted RBP29.16■■■□□ 2.26
RBFOX1-215ENST00000553186 DHX57Q6P158 1386 aaKnown RBP29.11■■■□□ 2.25
RBFOX1-215ENST00000553186 CDC42BPAQ5VT25 1732 aa29.1■■■□□ 2.25
RBFOX1-215ENST00000553186 HFM1A2PYH4 1435 aa29.09■■■□□ 2.25
RBFOX1-215ENST00000553186 CAMSAP2Q08AD1 1489 aa29.09■■■□□ 2.25
RBFOX1-215ENST00000553186 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.06■■■□□ 2.24
RBFOX1-215ENST00000553186 DAPK1P53355 1430 aa29.06■■■□□ 2.24
RBFOX1-215ENST00000553186 ABCC5O15440 1437 aa29.05■■■□□ 2.24
RBFOX1-215ENST00000553186 DNMT1P26358 1616 aaKnown RBP29.04■■■□□ 2.24
RBFOX1-215ENST00000553186 NAIPQ13075 1403 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms