RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 CLASP1Q7Z460 1538 aa28.03■■■□□ 2.08
ITGA5-213ENST00000553071 UBTFP17480 764 aaKnown RBP28.03■■■□□ 2.08
ITGA5-213ENST00000553071 JPH4Q96JJ6 628 aa28.02■■■□□ 2.08
ITGA5-213ENST00000553071 IQGAP2Q13576 1575 aa27.91■■■□□ 2.06
ITGA5-213ENST00000553071 EHMT2Q96KQ7 1210 aa27.91■■■□□ 2.06
ITGA5-213ENST00000553071 CTTNBP2Q8WZ74 1663 aa27.84■■■□□ 2.05
ITGA5-213ENST00000553071 CARMIL2Q6F5E8 1435 aa27.84■■■□□ 2.05
ITGA5-213ENST00000553071 PRG4Q92954 1404 aaPredicted RBP27.84■■■□□ 2.05
ITGA5-213ENST00000553071 SHROOM2Q13796 1616 aa27.84■■■□□ 2.05
ITGA5-213ENST00000553071 TNIKQ9UKE5 1360 aa27.83■■■□□ 2.05
ITGA5-213ENST00000553071 UGGT2Q9NYU1 1516 aa27.8■■■□□ 2.04
ITGA5-213ENST00000553071 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
ITGA5-213ENST00000553071 LOC105371045A0A1W2PR82 267 aa27.76■■■□□ 2.03
ITGA5-213ENST00000553071 RANGAP1P46060 587 aaPredicted RBP27.69■■■□□ 2.02
ITGA5-213ENST00000553071 RIMBP3CA6NJZ7 1639 aa27.67■■■□□ 2.02
ITGA5-213ENST00000553071 RIMBP3BA6NNM3 1639 aa27.67■■■□□ 2.02
ITGA5-213ENST00000553071 RIMBP3Q9UFD9 1639 aa27.67■■■□□ 2.02
ITGA5-213ENST00000553071 DISP1Q96F81 1524 aa27.67■■■□□ 2.02
ITGA5-213ENST00000553071 EFCAB5A4FU69 1503 aa27.63■■■□□ 2.01
ITGA5-213ENST00000553071 PTPRGP23470 1445 aa27.63■■■□□ 2.01
ITGA5-213ENST00000553071 ERCC6L2Q5T890 1561 aa27.6■■■□□ 2.01
ITGA5-213ENST00000553071 KIAA0556O60303 1618 aa27.6■■■□□ 2.01
ITGA5-213ENST00000553071 CYB5RLQ6IPT4 315 aa27.6■■■□□ 2.01
ITGA5-213ENST00000553071 P3H3Q8IVL6 736 aa27.58■■■□□ 2.01
ITGA5-213ENST00000553071 SAMD9Q5K651 1589 aa27.56■■■□□ 2
ITGA5-213ENST00000553071 CLIP1P30622 1438 aa27.56■■■□□ 2
ITGA5-213ENST00000553071 ARAP1Q96P48 1450 aa27.56■■■□□ 2
ITGA5-213ENST00000553071 CEP162Q5TB80 1403 aa27.51■■□□□ 1.99
ITGA5-213ENST00000553071 TTBK1Q5TCY1 1321 aaPredicted RBP27.51■■□□□ 1.99
ITGA5-213ENST00000553071 ARHGAP35Q9NRY4 1499 aa27.5■■□□□ 1.99
ITGA5-213ENST00000553071 FHOD3Q2V2M9 1422 aa27.46■■□□□ 1.99
ITGA5-213ENST00000553071 FMN1Q68DA7 1419 aa27.45■■□□□ 1.98
ITGA5-213ENST00000553071 UACAQ9BZF9 1416 aa27.43■■□□□ 1.98
ITGA5-213ENST00000553071 NPM1P06748 294 aaKnown RBP eCLIP27.4■■□□□ 1.98
ITGA5-213ENST00000553071 UHRF1BP1LA0JNW5 1464 aa27.37■■□□□ 1.97
ITGA5-213ENST00000553071 PLB1Q6P1J6 1458 aa27.32■■□□□ 1.96
ITGA5-213ENST00000553071 ABCC2Q92887 1545 aa27.3■■□□□ 1.96
ITGA5-213ENST00000553071 ABCA8O94911 1581 aa27.29■■□□□ 1.96
ITGA5-213ENST00000553071 ATP1B4Q9UN42 357 aaPredicted RBP27.24■■□□□ 1.95
ITGA5-213ENST00000553071 RAPGEF6Q8TEU7 1601 aa27.23■■□□□ 1.95
ITGA5-213ENST00000553071 CASKIN1Q8WXD9 1431 aa27.23■■□□□ 1.95
ITGA5-213ENST00000553071 ADCY10Q96PN6 1610 aa27.23■■□□□ 1.95
ITGA5-213ENST00000553071 KDM5BQ9UGL1 1544 aa27.21■■□□□ 1.95
ITGA5-213ENST00000553071 VPS8Q8N3P4 1428 aa27.18■■□□□ 1.94
ITGA5-213ENST00000553071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.17■■□□□ 1.94
ITGA5-213ENST00000553071 HNRNPUL2Q1KMD3 747 aaKnown RBP27.17■■□□□ 1.94
ITGA5-213ENST00000553071 FYCO1Q9BQS8 1478 aa27.16■■□□□ 1.94
ITGA5-213ENST00000553071 NUP153P49790 1475 aaKnown RBP27.15■■□□□ 1.94
ITGA5-213ENST00000553071 CDK11AQ9UQ88 783 aaPredicted RBP27.15■■□□□ 1.94
ITGA5-213ENST00000553071 HECW1Q76N89 1606 aa27.14■■□□□ 1.94
ITGA5-213ENST00000553071 ATP10BO94823 1461 aa27.13■■□□□ 1.93
ITGA5-213ENST00000553071 PLEKHD1A6NEE1 506 aa27.1■■□□□ 1.93
ITGA5-213ENST00000553071 ARID3CA6NKF2 412 aa27.09■■□□□ 1.93
ITGA5-213ENST00000553071 CCDC18Q5T9S5 1454 aa27.08■■□□□ 1.93
ITGA5-213ENST00000553071 MAPKBP1O60336 1514 aa27.07■■□□□ 1.92
ITGA5-213ENST00000553071 EPRSP07814 1512 aaKnown RBP27.07■■□□□ 1.92
ITGA5-213ENST00000553071 APLP2Q06481 763 aa27.07■■□□□ 1.92
ITGA5-213ENST00000553071 PCF11O94913 1555 aaKnown RBP27.05■■□□□ 1.92
ITGA5-213ENST00000553071 ZCCHC11Q5TAX3 1644 aaKnown RBP27.04■■□□□ 1.92
ITGA5-213ENST00000553071 ASXL2Q76L83 1435 aa27.03■■□□□ 1.92
ITGA5-213ENST00000553071 WDR7Q9Y4E6 1490 aa26.97■■□□□ 1.91
ITGA5-213ENST00000553071 CDK13Q14004 1512 aaKnown RBP26.95■■□□□ 1.91
ITGA5-213ENST00000553071 KCNH8Q96L42 1107 aa26.93■■□□□ 1.9
ITGA5-213ENST00000553071 MAP3K1Q13233 1512 aa26.92■■□□□ 1.9
ITGA5-213ENST00000553071 TRHP20396 242 aaPredicted RBP26.92■■□□□ 1.9
ITGA5-213ENST00000553071 ABCC10Q5T3U5 1492 aa26.91■■□□□ 1.9
ITGA5-213ENST00000553071 FAM69CQ0P6D2 419 aa26.9■■□□□ 1.9
ITGA5-213ENST00000553071 TROQ12816 1431 aaPredicted RBP26.89■■□□□ 1.89
ITGA5-213ENST00000553071 MTUS2Q5JR59 1369 aa26.88■■□□□ 1.89
ITGA5-213ENST00000553071 TIAM1Q13009 1591 aa26.82■■□□□ 1.88
ITGA5-213ENST00000553071 LRRIQ1Q96JM4 1722 aa26.82■■□□□ 1.88
ITGA5-213ENST00000553071 GLI2P10070 1586 aa26.8■■□□□ 1.88
ITGA5-213ENST00000553071 DIP2BQ9P265 1576 aa26.77■■□□□ 1.88
ITGA5-213ENST00000553071 LRRC9Q6ZRR7 1453 aa26.76■■□□□ 1.87
ITGA5-213ENST00000553071 CFAP43Q8NDM7 1665 aa26.76■■□□□ 1.87
ITGA5-213ENST00000553071 EHBP1L1Q8N3D4 1523 aa26.75■■□□□ 1.87
ITGA5-213ENST00000553071 CD109Q6YHK3 1445 aa26.73■■□□□ 1.87
ITGA5-213ENST00000553071 KANK4Q5T7N3 995 aaPredicted RBP26.72■■□□□ 1.87
ITGA5-213ENST00000553071 KIF14Q15058 1648 aa26.72■■□□□ 1.87
ITGA5-213ENST00000553071 MAGI3Q5TCQ9 1506 aa26.71■■□□□ 1.87
ITGA5-213ENST00000553071 ABCA9Q8IUA7 1624 aa26.68■■□□□ 1.86
ITGA5-213ENST00000553071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.66■■□□□ 1.863e-7■■□□□ 13.6
ITGA5-213ENST00000553071 KIF13AQ9H1H9 1805 aa26.65■■□□□ 1.86
ITGA5-213ENST00000553071 CCNB3Q8WWL7 1395 aa26.64■■□□□ 1.86
ITGA5-213ENST00000553071 TEX14Q8IWB6 1497 aa26.62■■□□□ 1.85
ITGA5-213ENST00000553071 PLCH2O75038 1416 aa26.62■■□□□ 1.85
ITGA5-213ENST00000553071 MAP3K4Q9Y6R4 1608 aa26.61■■□□□ 1.85
ITGA5-213ENST00000553071 PHLDB1Q86UU1 1377 aa26.61■■□□□ 1.85
ITGA5-213ENST00000553071 EFCAB2Q5VUJ9 269 aa26.61■■□□□ 1.85
ITGA5-213ENST00000553071 SUPT6HQ7KZ85 1726 aaKnown RBP26.61■■□□□ 1.85
ITGA5-213ENST00000553071 NCOA2Q15596 1464 aa26.6■■□□□ 1.85
ITGA5-213ENST00000553071 ARAP3Q8WWN8 1544 aa26.57■■□□□ 1.84
ITGA5-213ENST00000553071 TTC37Q6PGP7 1564 aa26.56■■□□□ 1.84
ITGA5-213ENST00000553071 CFDP1Q9UEE9 299 aaPredicted RBP26.56■■□□□ 1.84
ITGA5-213ENST00000553071 GPATCH8Q9UKJ3 1502 aaKnown RBP26.54■■□□□ 1.84
ITGA5-213ENST00000553071 NEO1Q92859 1461 aa26.52■■□□□ 1.84
ITGA5-213ENST00000553071 FANCAO15360 1455 aa26.5■■□□□ 1.83
ITGA5-213ENST00000553071 MYO5CQ9NQX4 1742 aa26.49■■□□□ 1.83
ITGA5-213ENST00000553071 ARHGAP5Q13017 1502 aa26.49■■□□□ 1.83
ITGA5-213ENST00000553071 PPARGC1BQ86YN6 1023 aaKnown RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms