RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 NISCHQ9Y2I1 1504 aa40.63■■■■■ 4.1
ITGA5-213ENST00000553071 CCDC180Q9P1Z9 1646 aa35.86■■■■□ 3.33
ITGA5-213ENST00000553071 ABCC9O60706 1549 aa34.65■■■■□ 3.14
ITGA5-213ENST00000553071 ZCCHC6Q5VYS8 1495 aaKnown RBP33.91■■■■□ 3.02
ITGA5-213ENST00000553071 DCAF8L2P0C7V8 631 aa33.87■■■■□ 3.01
ITGA5-213ENST00000553071 MYO15BQ96JP2 1530 aa33.7■■■□□ 2.99
ITGA5-213ENST00000553071 DCAF1Q9Y4B6 1507 aa33.7■■■□□ 2.99
ITGA5-213ENST00000553071 NACADO15069 1562 aa33.7■■■□□ 2.99
ITGA5-213ENST00000553071 RB1CC1Q8TDY2 1594 aa33.6■■■□□ 2.97
ITGA5-213ENST00000553071 SCRIBQ14160 1630 aa32.7■■■□□ 2.83
ITGA5-213ENST00000553071 UNC13AQ9UPW8 1703 aa32.6■■■□□ 2.81
ITGA5-213ENST00000553071 PABPN1Q86U42 306 aaKnown RBP eCLIP32.51■■■□□ 2.79
ITGA5-213ENST00000553071 BICRAQ9NZM4 1560 aa32.44■■■□□ 2.78
ITGA5-213ENST00000553071 SHROOM4Q9ULL8 1493 aa32.35■■■□□ 2.77
ITGA5-213ENST00000553071 EIF4G1Q04637 1599 aaKnown RBP31.61■■■□□ 2.65
ITGA5-213ENST00000553071 CECR2Q9BXF3 1484 aa31.53■■■□□ 2.64
ITGA5-213ENST00000553071 BAZ1AQ9NRL2 1556 aaPredicted RBP31.49■■■□□ 2.63
ITGA5-213ENST00000553071 DNAJC5BQ9UF47 199 aa31.37■■■□□ 2.61
ITGA5-213ENST00000553071 SMARCA4P51532 1647 aa31.36■■■□□ 2.61
ITGA5-213ENST00000553071 CC2D2AQ9P2K1 1620 aa31.34■■■□□ 2.61
ITGA5-213ENST00000553071 MROH2BQ7Z745 1585 aa31.26■■■□□ 2.59
ITGA5-213ENST00000553071 SMARCA2P51531 1590 aa31.17■■■□□ 2.58
ITGA5-213ENST00000553071 RSF1Q96T23 1441 aaPredicted RBP31.15■■■□□ 2.58
ITGA5-213ENST00000553071 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.58
ITGA5-213ENST00000553071 NCAPD3P42695 1498 aa31.12■■■□□ 2.57
ITGA5-213ENST00000553071 PEG3Q9GZU2 1588 aa31.1■■■□□ 2.57
ITGA5-213ENST00000553071 HMGXB3Q12766 1538 aa30.94■■■□□ 2.54
ITGA5-213ENST00000553071 BAZ1BQ9UIG0 1483 aaKnown RBP30.94■■■□□ 2.54
ITGA5-213ENST00000553071 WIZO95785 1651 aa30.89■■■□□ 2.54
ITGA5-213ENST00000553071 SUPT5HO00267 1087 aaKnown RBP30.76■■■□□ 2.51
ITGA5-213ENST00000553071 TOP2AP11388 1531 aaKnown RBP30.68■■■□□ 2.5
ITGA5-213ENST00000553071 CCDC88BA6NC98 1476 aa30.34■■■□□ 2.45
ITGA5-213ENST00000553071 CADPSQ9ULU8 1353 aa30.26■■■□□ 2.43
ITGA5-213ENST00000553071 LAMC3Q9Y6N6 1575 aa30.18■■■□□ 2.42
ITGA5-213ENST00000553071 CFTRP13569 1480 aa30.12■■■□□ 2.41
ITGA5-213ENST00000553071 NESP48681 1621 aa30.07■■■□□ 2.4
ITGA5-213ENST00000553071 PDS5BQ9NTI5 1447 aa30.06■■■□□ 2.4
ITGA5-213ENST00000553071 ERCC6Q03468 1493 aa29.93■■■□□ 2.38
ITGA5-213ENST00000553071 FANCD2Q9BXW9 1451 aa29.85■■■□□ 2.37
ITGA5-213ENST00000553071 CEP164Q9UPV0 1460 aa29.77■■■□□ 2.36
ITGA5-213ENST00000553071 PRDM2Q13029 1718 aa29.76■■■□□ 2.36
ITGA5-213ENST00000553071 KIF21AQ7Z4S6 1674 aa29.66■■■□□ 2.34
ITGA5-213ENST00000553071 MRC2Q9UBG0 1479 aa29.62■■■□□ 2.33
ITGA5-213ENST00000553071 ABCC8Q09428 1581 aa29.57■■■□□ 2.32
ITGA5-213ENST00000553071 THOC2Q8NI27 1593 aaKnown RBP29.48■■■□□ 2.31
ITGA5-213ENST00000553071 WDR62O43379 1518 aa29.46■■■□□ 2.31
ITGA5-213ENST00000553071 URB2Q14146 1524 aaKnown RBP29.45■■■□□ 2.3
ITGA5-213ENST00000553071 CUX2O14529 1486 aa29.44■■■□□ 2.3
ITGA5-213ENST00000553071 DNMBPQ6XZF7 1577 aa29.39■■■□□ 2.3
ITGA5-213ENST00000553071 WRNQ14191 1432 aaPredicted RBP eCLIP29.39■■■□□ 2.3
ITGA5-213ENST00000553071 TOPBP1Q92547 1522 aa29.39■■■□□ 2.3
ITGA5-213ENST00000553071 CUX1P39880 1505 aa29.3■■■□□ 2.28
ITGA5-213ENST00000553071 TOP2BQ02880 1626 aa29.2■■■□□ 2.27
ITGA5-213ENST00000553071 POLA1P09884 1462 aaPredicted RBP29.17■■■□□ 2.26
ITGA5-213ENST00000553071 IFT140Q96RY7 1462 aa29.17■■■□□ 2.26
ITGA5-213ENST00000553071 FGD5Q6ZNL6 1462 aa29.16■■■□□ 2.26
ITGA5-213ENST00000553071 BIVM-ERCC5R4GMW8 1640 aa29.15■■■□□ 2.26
ITGA5-213ENST00000553071 SYNJ1O43426 1573 aa29.14■■■□□ 2.26
ITGA5-213ENST00000553071 SOGA1O94964 1423 aa29.14■■■□□ 2.26
ITGA5-213ENST00000553071 TRIM41Q8WV44 630 aa29.12■■■□□ 2.25
ITGA5-213ENST00000553071 RAD54L2Q9Y4B4 1467 aa29.01■■■□□ 2.23
ITGA5-213ENST00000553071 CHIC1Q5VXU3 224 aa28.99■■■□□ 2.23
ITGA5-213ENST00000553071 TARBP1Q13395 1621 aaKnown RBP28.97■■■□□ 2.23
ITGA5-213ENST00000553071 ABCA10Q8WWZ4 1543 aa28.95■■■□□ 2.23
ITGA5-213ENST00000553071 WDR97A6NE52 1622 aa28.9■■■□□ 2.22
ITGA5-213ENST00000553071 TDRD9Q8NDG6 1382 aaKnown RBP28.88■■■□□ 2.21
ITGA5-213ENST00000553071 ZNF608Q9ULD9 1512 aaPredicted RBP28.87■■■□□ 2.21
ITGA5-213ENST00000553071 AQRO60306 1485 aaKnown RBP eCLIP28.83■■■□□ 2.211e-7■■■■□ 23.4
ITGA5-213ENST00000553071 KIF27Q86VH2 1401 aa28.79■■■□□ 2.2
ITGA5-213ENST00000553071 GAPVD1Q14C86 1478 aa28.78■■■□□ 2.2
ITGA5-213ENST00000553071 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
ITGA5-213ENST00000553071 GRIN2BQ13224 1484 aa28.74■■■□□ 2.19
ITGA5-213ENST00000553071 ABCA5Q8WWZ7 1642 aa28.69■■■□□ 2.18
ITGA5-213ENST00000553071 ERICH3Q5RHP9 1530 aa28.63■■■□□ 2.17
ITGA5-213ENST00000553071 MAGI1Q96QZ7 1491 aaPredicted RBP28.61■■■□□ 2.17
ITGA5-213ENST00000553071 EEA1Q15075 1411 aa28.6■■■□□ 2.17
ITGA5-213ENST00000553071 IGF1RP08069 1367 aa28.59■■■□□ 2.17
ITGA5-213ENST00000553071 SNAPC4Q5SXM2 1469 aa28.55■■■□□ 2.16
ITGA5-213ENST00000553071 CHMP7Q8WUX9 453 aaPredicted RBP28.54■■■□□ 2.16
ITGA5-213ENST00000553071 PBRM1Q86U86 1689 aa28.53■■■□□ 2.16
ITGA5-213ENST00000553071 FHAD1B1AJZ9 1412 aa28.51■■■□□ 2.15
ITGA5-213ENST00000553071 FBLN2P98095 1184 aa28.5■■■□□ 2.15
ITGA5-213ENST00000553071 CSRNP3Q8WYN3 585 aa28.49■■■□□ 2.15
ITGA5-213ENST00000553071 RUSC2Q8N2Y8 1516 aa28.48■■■□□ 2.15
ITGA5-213ENST00000553071 SYNJ2O15056 1496 aa28.48■■■□□ 2.15
ITGA5-213ENST00000553071 CARMIL1Q5VZK9 1371 aa28.45■■■□□ 2.14
ITGA5-213ENST00000553071 OSCARQ8IYS5 282 aa28.42■■■□□ 2.14
ITGA5-213ENST00000553071 CUL7Q14999 1698 aa28.41■■■□□ 2.14
ITGA5-213ENST00000553071 ADAMTS12P58397 1594 aa28.39■■■□□ 2.14
ITGA5-213ENST00000553071 FAM9AQ8IZU1 332 aaPredicted RBP28.39■■■□□ 2.14
ITGA5-213ENST00000553071 GRIN2AQ12879 1464 aa28.32■■■□□ 2.12
ITGA5-213ENST00000553071 RAPGEF2Q9Y4G8 1499 aa28.31■■■□□ 2.12
ITGA5-213ENST00000553071 PRXQ9BXM0 1461 aa28.28■■■□□ 2.12
ITGA5-213ENST00000553071 CHD1O14646 1710 aa28.24■■■□□ 2.11
ITGA5-213ENST00000553071 NUP160Q12769 1436 aa28.18■■■□□ 2.1
ITGA5-213ENST00000553071 KIF21BO75037 1637 aa28.1■■■□□ 2.09
ITGA5-213ENST00000553071 KIAA0586Q9BVV6 1533 aa28.08■■■□□ 2.09
ITGA5-213ENST00000553071 CEP170Q5SW79 1584 aa28.07■■■□□ 2.08
ITGA5-213ENST00000553071 GOLGA3Q08378 1498 aa28.05■■■□□ 2.08
ITGA5-213ENST00000553071 DNAJC5Q9H3Z4 198 aa28.04■■■□□ 2.08
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