RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ARAP1Q96P48 1450 aa18.19■□□□□ 0.5
HDAC7-230ENST00000552960 VPS8Q8N3P4 1428 aa18.19■□□□□ 0.5
HDAC7-230ENST00000552960 AQRO60306 1485 aaKnown RBP eCLIP18.15■□□□□ 0.55e-7■■■■■ 29
HDAC7-230ENST00000552960 ARHGAP35Q9NRY4 1499 aa18.13■□□□□ 0.49
HDAC7-230ENST00000552960 MRC2Q9UBG0 1479 aa18.12■□□□□ 0.49
HDAC7-230ENST00000552960 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
HDAC7-230ENST00000552960 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
HDAC7-230ENST00000552960 KANK4Q5T7N3 995 aaPredicted RBP18.11■□□□□ 0.49
HDAC7-230ENST00000552960 WDR97A6NE52 1622 aa18.09■□□□□ 0.49
HDAC7-230ENST00000552960 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.49
HDAC7-230ENST00000552960 TARBP1Q13395 1621 aaKnown RBP18.08■□□□□ 0.49
HDAC7-230ENST00000552960 ATP1B4Q9UN42 357 aaPredicted RBP18.06■□□□□ 0.48
HDAC7-230ENST00000552960 ABCA5Q8WWZ7 1642 aa18.05■□□□□ 0.48
HDAC7-230ENST00000552960 FHOD3Q2V2M9 1422 aa17.99■□□□□ 0.47
HDAC7-230ENST00000552960 WDR62O43379 1518 aa17.97■□□□□ 0.47
HDAC7-230ENST00000552960 CUL7Q14999 1698 aa17.95■□□□□ 0.46
HDAC7-230ENST00000552960 ITGAEP38570 1179 aa17.94■□□□□ 0.46
HDAC7-230ENST00000552960 SUPT16HQ9Y5B9 1047 aaKnown RBP17.92■□□□□ 0.46
HDAC7-230ENST00000552960 THOC2Q8NI27 1593 aaKnown RBP17.91■□□□□ 0.46
HDAC7-230ENST00000552960 IFT140Q96RY7 1462 aa17.9■□□□□ 0.46
HDAC7-230ENST00000552960 FBLN2P98095 1184 aa17.89■□□□□ 0.45
HDAC7-230ENST00000552960 PBRM1Q86U86 1689 aa17.88■□□□□ 0.45
HDAC7-230ENST00000552960 GRIN2BQ13224 1484 aa17.87■□□□□ 0.45
HDAC7-230ENST00000552960 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
HDAC7-230ENST00000552960 BCANQ96GW7 911 aa17.85■□□□□ 0.45
HDAC7-230ENST00000552960 SNAPC4Q5SXM2 1469 aa17.85■□□□□ 0.45
HDAC7-230ENST00000552960 CTTNBP2Q8WZ74 1663 aa17.84■□□□□ 0.45
HDAC7-230ENST00000552960 ARID3CA6NKF2 412 aa17.84■□□□□ 0.45
HDAC7-230ENST00000552960 EIF4G3O43432 1585 aaKnown RBP17.83■□□□□ 0.45
HDAC7-230ENST00000552960 PCF11O94913 1555 aaKnown RBP17.82■□□□□ 0.44
HDAC7-230ENST00000552960 ADAMTS12P58397 1594 aa17.82■□□□□ 0.44
HDAC7-230ENST00000552960 KCNH8Q96L42 1107 aa17.79■□□□□ 0.44
HDAC7-230ENST00000552960 DHX57Q6P158 1386 aaKnown RBP17.79■□□□□ 0.44
HDAC7-230ENST00000552960 CHMP7Q8WUX9 453 aaPredicted RBP17.77■□□□□ 0.44
HDAC7-230ENST00000552960 TIAM1Q13009 1591 aa17.75■□□□□ 0.43
HDAC7-230ENST00000552960 TSHZ2Q9NRE2 1034 aa17.74■□□□□ 0.43
HDAC7-230ENST00000552960 EFCAB5A4FU69 1503 aa17.73■□□□□ 0.43
HDAC7-230ENST00000552960 PHLDB1Q86UU1 1377 aa17.72■□□□□ 0.43
HDAC7-230ENST00000552960 LRRC9Q6ZRR7 1453 aa17.72■□□□□ 0.43
HDAC7-230ENST00000552960 SAMD9Q5K651 1589 aa17.71■□□□□ 0.43
HDAC7-230ENST00000552960 GRIN2AQ12879 1464 aa17.7■□□□□ 0.42
HDAC7-230ENST00000552960 CASKIN1Q8WXD9 1431 aa17.7■□□□□ 0.42
HDAC7-230ENST00000552960 IQGAP2Q13576 1575 aa17.69■□□□□ 0.42
HDAC7-230ENST00000552960 CLSPNQ9HAW4 1339 aa17.69■□□□□ 0.42
HDAC7-230ENST00000552960 FMN1Q68DA7 1419 aa17.67■□□□□ 0.42
HDAC7-230ENST00000552960 CCNB3Q8WWL7 1395 aa17.66■□□□□ 0.42
HDAC7-230ENST00000552960 FYCO1Q9BQS8 1478 aa17.66■□□□□ 0.42
HDAC7-230ENST00000552960 FAM50AQ14320 339 aaKnown RBP17.66■□□□□ 0.42
HDAC7-230ENST00000552960 FKBP8Q14318 412 aa17.66■□□□□ 0.42
HDAC7-230ENST00000552960 DDX10Q13206 875 aaKnown RBP17.65■□□□□ 0.42
HDAC7-230ENST00000552960 ANP32EQ9BTT0 268 aa17.65■□□□□ 0.42
HDAC7-230ENST00000552960 RRBP1Q9P2E9 1410 aaKnown RBP17.65■□□□□ 0.42
HDAC7-230ENST00000552960 BCL11AQ9H165 835 aa17.64■□□□□ 0.41
HDAC7-230ENST00000552960 LRRIQ1Q96JM4 1722 aa17.63■□□□□ 0.41
HDAC7-230ENST00000552960 HIRIP3Q9BW71 556 aaPredicted RBP17.63■□□□□ 0.41
HDAC7-230ENST00000552960 CEP170Q5SW79 1584 aa17.63■□□□□ 0.41
HDAC7-230ENST00000552960 SYNJ2O15056 1496 aa17.62■□□□□ 0.41
HDAC7-230ENST00000552960 MAGI1Q96QZ7 1491 aaPredicted RBP17.61■□□□□ 0.41
HDAC7-230ENST00000552960 KIAA0586Q9BVV6 1533 aa17.61■□□□□ 0.41
HDAC7-230ENST00000552960 DISP1Q96F81 1524 aa17.61■□□□□ 0.41
HDAC7-230ENST00000552960 MAP3K1Q13233 1512 aa17.6■□□□□ 0.41
HDAC7-230ENST00000552960 MTUS2Q5JR59 1369 aa17.6■□□□□ 0.41
HDAC7-230ENST00000552960 CFAP43Q8NDM7 1665 aa17.6■□□□□ 0.41
HDAC7-230ENST00000552960 JPH4Q96JJ6 628 aa17.58■□□□□ 0.4
HDAC7-230ENST00000552960 CDK13Q14004 1512 aaKnown RBP17.57■□□□□ 0.4
HDAC7-230ENST00000552960 MAGI3Q5TCQ9 1506 aa17.56■□□□□ 0.4
HDAC7-230ENST00000552960 TRIM52Q96A61 297 aa17.56■□□□□ 0.4
HDAC7-230ENST00000552960 SIN3AQ96ST3 1273 aa17.56■□□□□ 0.4
HDAC7-230ENST00000552960 UGGT2Q9NYU1 1516 aa17.55■□□□□ 0.4
HDAC7-230ENST00000552960 NEFLP07196 543 aa17.54■□□□□ 0.4
HDAC7-230ENST00000552960 KIAA0556O60303 1618 aa17.52■□□□□ 0.4
HDAC7-230ENST00000552960 NUP160Q12769 1436 aa17.51■□□□□ 0.39
HDAC7-230ENST00000552960 RAB3GAP2Q9H2M9 1393 aa17.5■□□□□ 0.39
HDAC7-230ENST00000552960 PLB1Q6P1J6 1458 aa17.5■□□□□ 0.39
HDAC7-230ENST00000552960 EPRSP07814 1512 aaKnown RBP17.5■□□□□ 0.39
HDAC7-230ENST00000552960 NCOA2Q15596 1464 aa17.48■□□□□ 0.39
HDAC7-230ENST00000552960 NUP153P49790 1475 aaKnown RBP17.45■□□□□ 0.38
HDAC7-230ENST00000552960 FGD6Q6ZV73 1430 aa17.45■□□□□ 0.38
HDAC7-230ENST00000552960 PTPRKQ15262 1439 aa17.43■□□□□ 0.38
HDAC7-230ENST00000552960 HECW1Q76N89 1606 aa17.42■□□□□ 0.38
HDAC7-230ENST00000552960 CHIC2Q9UKJ5 165 aa17.41■□□□□ 0.38
HDAC7-230ENST00000552960 ANP32CO43423 234 aa17.4■□□□□ 0.38
HDAC7-230ENST00000552960 RBM19Q9Y4C8 960 aaKnown RBP17.4■□□□□ 0.38
HDAC7-230ENST00000552960 PRG4Q92954 1404 aaPredicted RBP17.4■□□□□ 0.38
HDAC7-230ENST00000552960 CHD1O14646 1710 aa17.4■□□□□ 0.38
HDAC7-230ENST00000552960 ZNF644Q9H582 1327 aaPredicted RBP17.39■□□□□ 0.37
HDAC7-230ENST00000552960 CCDC18Q5T9S5 1454 aa17.38■□□□□ 0.37
HDAC7-230ENST00000552960 MYOM3Q5VTT5 1437 aa17.38■□□□□ 0.37
HDAC7-230ENST00000552960 EHBP1L1Q8N3D4 1523 aa17.38■□□□□ 0.37
HDAC7-230ENST00000552960 CARMIL2Q6F5E8 1435 aa17.37■□□□□ 0.37
HDAC7-230ENST00000552960 RAPGEF6Q8TEU7 1601 aa17.36■□□□□ 0.37
HDAC7-230ENST00000552960 IRX6P78412 446 aaPredicted RBP17.36■□□□□ 0.37
HDAC7-230ENST00000552960 ERCC6L2Q5T890 1561 aa17.35■□□□□ 0.37
HDAC7-230ENST00000552960 SETD5Q9C0A6 1442 aa17.35■□□□□ 0.37
HDAC7-230ENST00000552960 SUPT6HQ7KZ85 1726 aaKnown RBP17.35■□□□□ 0.37
HDAC7-230ENST00000552960 RRP7BPQ9NSQ0 103 aa17.34■□□□□ 0.37
HDAC7-230ENST00000552960 ARHGEF11O15085 1522 aa17.32■□□□□ 0.36
HDAC7-230ENST00000552960 PPP1R15AO75807 674 aaPredicted RBP17.31■□□□□ 0.36
HDAC7-230ENST00000552960 MAPKBP1O60336 1514 aa17.31■□□□□ 0.36
HDAC7-230ENST00000552960 PTPRGP23470 1445 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms