RNA–Protein interactions for RNA: ENST00000552548.5

PFDN5-217, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-217ENST00000552548 NUP160Q12769 1436 aa11.62□□□□□ -0.55
PFDN5-217ENST00000552548 P3H3Q8IVL6 736 aa11.61□□□□□ -0.55
PFDN5-217ENST00000552548 GOLGA3Q08378 1498 aa11.6□□□□□ -0.55
PFDN5-217ENST00000552548 OSCARQ8IYS5 282 aa11.59□□□□□ -0.55
PFDN5-217ENST00000552548 TTBK1Q5TCY1 1321 aaPredicted RBP11.59□□□□□ -0.55
PFDN5-217ENST00000552548 CLASP1Q7Z460 1538 aa11.58□□□□□ -0.56
PFDN5-217ENST00000552548 JPH4Q96JJ6 628 aa11.55□□□□□ -0.56
PFDN5-217ENST00000552548 KIAA0586Q9BVV6 1533 aa11.54□□□□□ -0.56
PFDN5-217ENST00000552548 TNIKQ9UKE5 1360 aa11.53□□□□□ -0.56
PFDN5-217ENST00000552548 PRG4Q92954 1404 aaPredicted RBP11.52□□□□□ -0.57
PFDN5-217ENST00000552548 DISP1Q96F81 1524 aa11.51□□□□□ -0.57
PFDN5-217ENST00000552548 IQGAP2Q13576 1575 aa11.5□□□□□ -0.57
PFDN5-217ENST00000552548 FHOD3Q2V2M9 1422 aa11.5□□□□□ -0.57
PFDN5-217ENST00000552548 ARHGAP35Q9NRY4 1499 aa11.5□□□□□ -0.57
PFDN5-217ENST00000552548 CTTNBP2Q8WZ74 1663 aa11.49□□□□□ -0.57
PFDN5-217ENST00000552548 CEP162Q5TB80 1403 aa11.49□□□□□ -0.57
PFDN5-217ENST00000552548 SHROOM2Q13796 1616 aa11.47□□□□□ -0.57
PFDN5-217ENST00000552548 ARAP1Q96P48 1450 aa11.47□□□□□ -0.57
PFDN5-217ENST00000552548 ARID3CA6NKF2 412 aa11.47□□□□□ -0.57
PFDN5-217ENST00000552548 UGGT2Q9NYU1 1516 aa11.46□□□□□ -0.57
PFDN5-217ENST00000552548 CLIP1P30622 1438 aa11.45□□□□□ -0.58
PFDN5-217ENST00000552548 ARHGEF11O15085 1522 aa11.45□□□□□ -0.58
PFDN5-217ENST00000552548 DNAJC5Q9H3Z4 198 aa11.44□□□□□ -0.58
PFDN5-217ENST00000552548 RIMBP3CA6NJZ7 1639 aa11.42□□□□□ -0.58
PFDN5-217ENST00000552548 RIMBP3BA6NNM3 1639 aa11.42□□□□□ -0.58
PFDN5-217ENST00000552548 KIAA0556O60303 1618 aa11.42□□□□□ -0.58
PFDN5-217ENST00000552548 RIMBP3Q9UFD9 1639 aa11.42□□□□□ -0.58
PFDN5-217ENST00000552548 SAMD9Q5K651 1589 aa11.42□□□□□ -0.58
PFDN5-217ENST00000552548 CYB5RLQ6IPT4 315 aa11.41□□□□□ -0.58
PFDN5-217ENST00000552548 PLB1Q6P1J6 1458 aa11.39□□□□□ -0.59
PFDN5-217ENST00000552548 PPARGC1BQ86YN6 1023 aaKnown RBP11.39□□□□□ -0.59
PFDN5-217ENST00000552548 PTPRGP23470 1445 aa11.36□□□□□ -0.59
PFDN5-217ENST00000552548 ATP1B4Q9UN42 357 aaPredicted RBP11.36□□□□□ -0.59
PFDN5-217ENST00000552548 CARMIL2Q6F5E8 1435 aa11.34□□□□□ -0.59
PFDN5-217ENST00000552548 PCF11O94913 1555 aaKnown RBP11.33□□□□□ -0.6
PFDN5-217ENST00000552548 EFCAB5A4FU69 1503 aa11.32□□□□□ -0.6
PFDN5-217ENST00000552548 CDK13Q14004 1512 aaKnown RBP11.3□□□□□ -0.6
PFDN5-217ENST00000552548 ABCA8O94911 1581 aa11.3□□□□□ -0.6
PFDN5-217ENST00000552548 ADCY10Q96PN6 1610 aa11.3□□□□□ -0.6
PFDN5-217ENST00000552548 NUP153P49790 1475 aaKnown RBP11.3□□□□□ -0.6
PFDN5-217ENST00000552548 LRRIQ1Q96JM4 1722 aa11.29□□□□□ -0.6
PFDN5-217ENST00000552548 KANK4Q5T7N3 995 aaPredicted RBP11.29□□□□□ -0.6
PFDN5-217ENST00000552548 VPS8Q8N3P4 1428 aa11.28□□□□□ -0.6
PFDN5-217ENST00000552548 UACAQ9BZF9 1416 aa11.28□□□□□ -0.6
PFDN5-217ENST00000552548 ATP10BO94823 1461 aa11.26□□□□□ -0.61
PFDN5-217ENST00000552548 MAGI3Q5TCQ9 1506 aa11.26□□□□□ -0.61
PFDN5-217ENST00000552548 RAPGEF6Q8TEU7 1601 aa11.25□□□□□ -0.61
PFDN5-217ENST00000552548 CASKIN1Q8WXD9 1431 aa11.25□□□□□ -0.61
PFDN5-217ENST00000552548 ABCC2Q92887 1545 aa11.25□□□□□ -0.61
PFDN5-217ENST00000552548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.23□□□□□ -0.61
PFDN5-217ENST00000552548 HNRNPUL2Q1KMD3 747 aaKnown RBP11.23□□□□□ -0.61
PFDN5-217ENST00000552548 FMN1Q68DA7 1419 aa11.23□□□□□ -0.61
PFDN5-217ENST00000552548 EPRSP07814 1512 aaKnown RBP11.22□□□□□ -0.61
PFDN5-217ENST00000552548 UHRF1BP1LA0JNW5 1464 aa11.2□□□□□ -0.62
PFDN5-217ENST00000552548 KCNH8Q96L42 1107 aa11.2□□□□□ -0.62
PFDN5-217ENST00000552548 ZCCHC11Q5TAX3 1644 aaKnown RBP11.2□□□□□ -0.62
PFDN5-217ENST00000552548 KDM5BQ9UGL1 1544 aa11.19□□□□□ -0.62
PFDN5-217ENST00000552548 FYCO1Q9BQS8 1478 aa11.19□□□□□ -0.62
PFDN5-217ENST00000552548 HECW1Q76N89 1606 aa11.17□□□□□ -0.62
PFDN5-217ENST00000552548 ASXL2Q76L83 1435 aa11.17□□□□□ -0.62
PFDN5-217ENST00000552548 KIF14Q15058 1648 aa11.15□□□□□ -0.62
PFDN5-217ENST00000552548 TIAM1Q13009 1591 aa11.15□□□□□ -0.62
PFDN5-217ENST00000552548 LRRC9Q6ZRR7 1453 aa11.12□□□□□ -0.63
PFDN5-217ENST00000552548 CFAP43Q8NDM7 1665 aa11.11□□□□□ -0.63
PFDN5-217ENST00000552548 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
PFDN5-217ENST00000552548 PLEKHD1A6NEE1 506 aa11.1□□□□□ -0.63
PFDN5-217ENST00000552548 PHLDB1Q86UU1 1377 aa11.1□□□□□ -0.63
PFDN5-217ENST00000552548 TROQ12816 1431 aaPredicted RBP11.09□□□□□ -0.63
PFDN5-217ENST00000552548 WDR7Q9Y4E6 1490 aa11.09□□□□□ -0.63
PFDN5-217ENST00000552548 FAM69CQ0P6D2 419 aa11.09□□□□□ -0.63
PFDN5-217ENST00000552548 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
PFDN5-217ENST00000552548 MTUS2Q5JR59 1369 aa11.08□□□□□ -0.64
PFDN5-217ENST00000552548 TTC37Q6PGP7 1564 aa11.07□□□□□ -0.64
PFDN5-217ENST00000552548 ABCC10Q5T3U5 1492 aa11.07□□□□□ -0.64
PFDN5-217ENST00000552548 CCDC18Q5T9S5 1454 aa11.07□□□□□ -0.64
PFDN5-217ENST00000552548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.07□□□□□ -0.64
PFDN5-217ENST00000552548 NCOA2Q15596 1464 aa11.06□□□□□ -0.64
PFDN5-217ENST00000552548 MAPKBP1O60336 1514 aa11.06□□□□□ -0.64
PFDN5-217ENST00000552548 APLP2Q06481 763 aa11.06□□□□□ -0.64
PFDN5-217ENST00000552548 TRHP20396 242 aaPredicted RBP11.05□□□□□ -0.64
PFDN5-217ENST00000552548 DIP2BQ9P265 1576 aa11.04□□□□□ -0.64
PFDN5-217ENST00000552548 MAP3K1Q13233 1512 aa11.04□□□□□ -0.64
PFDN5-217ENST00000552548 EHBP1L1Q8N3D4 1523 aa11.03□□□□□ -0.64
PFDN5-217ENST00000552548 ZNF777Q9ULD5 760 aaPredicted RBP11.02□□□□□ -0.65
PFDN5-217ENST00000552548 GPATCH8Q9UKJ3 1502 aaKnown RBP11.02□□□□□ -0.65
PFDN5-217ENST00000552548 KIF13AQ9H1H9 1805 aa11.01□□□□□ -0.65
PFDN5-217ENST00000552548 CDK11AQ9UQ88 783 aaPredicted RBP11□□□□□ -0.65
PFDN5-217ENST00000552548 CD109Q6YHK3 1445 aa10.99□□□□□ -0.65
PFDN5-217ENST00000552548 COL17A1Q9UMD9 1497 aaPredicted RBP10.99□□□□□ -0.65
PFDN5-217ENST00000552548 ARHGEF12Q9NZN5 1544 aa10.99□□□□□ -0.65
PFDN5-217ENST00000552548 PPRC1Q5VV67 1664 aaKnown RBP10.98□□□□□ -0.65
PFDN5-217ENST00000552548 TSPOAP1O95153 1857 aa10.98□□□□□ -0.65
PFDN5-217ENST00000552548 CCNB3Q8WWL7 1395 aa10.98□□□□□ -0.65
PFDN5-217ENST00000552548 ABCA9Q8IUA7 1624 aa10.98□□□□□ -0.65
PFDN5-217ENST00000552548 ITGAEP38570 1179 aa10.97□□□□□ -0.65
PFDN5-217ENST00000552548 HNRNPMP52272 730 aaKnown RBP eCLIP10.97□□□□□ -0.65
PFDN5-217ENST00000552548 CDC42BPAQ5VT25 1732 aa10.97□□□□□ -0.65
PFDN5-217ENST00000552548 SUPT6HQ7KZ85 1726 aaKnown RBP10.96□□□□□ -0.65
PFDN5-217ENST00000552548 CDC42BPBQ9Y5S2 1711 aa10.96□□□□□ -0.65
PFDN5-217ENST00000552548 MAP3K4Q9Y6R4 1608 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms