RNA–Protein interactions for RNA: ENST00000552548.5

PFDN5-217, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-217ENST00000552548 NISCHQ9Y2I1 1504 aa16.82■□□□□ 0.28
PFDN5-217ENST00000552548 CCDC180Q9P1Z9 1646 aa14.66□□□□□ -0.06
PFDN5-217ENST00000552548 ABCC9O60706 1549 aa14.42□□□□□ -0.1
PFDN5-217ENST00000552548 DCAF8L2P0C7V8 631 aa14.13□□□□□ -0.15
PFDN5-217ENST00000552548 ZCCHC6Q5VYS8 1495 aaKnown RBP14.06□□□□□ -0.16
PFDN5-217ENST00000552548 DCAF1Q9Y4B6 1507 aa13.77□□□□□ -0.21
PFDN5-217ENST00000552548 NACADO15069 1562 aa13.76□□□□□ -0.21
PFDN5-217ENST00000552548 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
PFDN5-217ENST00000552548 SHROOM4Q9ULL8 1493 aa13.72□□□□□ -0.21
PFDN5-217ENST00000552548 MYO15BQ96JP2 1530 aa13.68□□□□□ -0.22
PFDN5-217ENST00000552548 SCRIBQ14160 1630 aa13.65□□□□□ -0.22
PFDN5-217ENST00000552548 PABPN1Q86U42 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
PFDN5-217ENST00000552548 UNC13AQ9UPW8 1703 aa13.54□□□□□ -0.24
PFDN5-217ENST00000552548 BICRAQ9NZM4 1560 aa13.49□□□□□ -0.25
PFDN5-217ENST00000552548 CECR2Q9BXF3 1484 aa13.25□□□□□ -0.29
PFDN5-217ENST00000552548 DNAJC5BQ9UF47 199 aa13.18□□□□□ -0.3
PFDN5-217ENST00000552548 MROH2BQ7Z745 1585 aa13.07□□□□□ -0.32
PFDN5-217ENST00000552548 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
PFDN5-217ENST00000552548 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
PFDN5-217ENST00000552548 RSF1Q96T23 1441 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-217ENST00000552548 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
PFDN5-217ENST00000552548 CC2D2AQ9P2K1 1620 aa12.96□□□□□ -0.33
PFDN5-217ENST00000552548 WIZO95785 1651 aa12.94□□□□□ -0.34
PFDN5-217ENST00000552548 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
PFDN5-217ENST00000552548 ATAD2BQ9ULI0 1458 aa12.89□□□□□ -0.35
PFDN5-217ENST00000552548 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
PFDN5-217ENST00000552548 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.37
PFDN5-217ENST00000552548 BAZ1BQ9UIG0 1483 aaKnown RBP12.75□□□□□ -0.37
PFDN5-217ENST00000552548 SMARCA2P51531 1590 aa12.74□□□□□ -0.37
PFDN5-217ENST00000552548 TOP2AP11388 1531 aaKnown RBP12.69□□□□□ -0.38
PFDN5-217ENST00000552548 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
PFDN5-217ENST00000552548 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
PFDN5-217ENST00000552548 NESP48681 1621 aa12.6□□□□□ -0.39
PFDN5-217ENST00000552548 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
PFDN5-217ENST00000552548 CFTRP13569 1480 aa12.41□□□□□ -0.42
PFDN5-217ENST00000552548 ABCC8Q09428 1581 aa12.33□□□□□ -0.44
PFDN5-217ENST00000552548 FANCD2Q9BXW9 1451 aa12.33□□□□□ -0.44
PFDN5-217ENST00000552548 LAMC3Q9Y6N6 1575 aa12.32□□□□□ -0.44
PFDN5-217ENST00000552548 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
PFDN5-217ENST00000552548 ERCC6Q03468 1493 aa12.27□□□□□ -0.45
PFDN5-217ENST00000552548 URB2Q14146 1524 aaKnown RBP12.26□□□□□ -0.45
PFDN5-217ENST00000552548 PDS5BQ9NTI5 1447 aa12.25□□□□□ -0.45
PFDN5-217ENST00000552548 CEP164Q9UPV0 1460 aa12.23□□□□□ -0.45
PFDN5-217ENST00000552548 CUX1P39880 1505 aa12.22□□□□□ -0.45
PFDN5-217ENST00000552548 CHIC1Q5VXU3 224 aa12.22□□□□□ -0.45
PFDN5-217ENST00000552548 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
PFDN5-217ENST00000552548 THOC2Q8NI27 1593 aaKnown RBP12.2□□□□□ -0.46
PFDN5-217ENST00000552548 PRDM2Q13029 1718 aa12.2□□□□□ -0.46
PFDN5-217ENST00000552548 MRC2Q9UBG0 1479 aa12.18□□□□□ -0.46
PFDN5-217ENST00000552548 TOPBP1Q92547 1522 aa12.17□□□□□ -0.46
PFDN5-217ENST00000552548 WRNQ14191 1432 aaPredicted RBP eCLIP12.17□□□□□ -0.46
PFDN5-217ENST00000552548 RAD54L2Q9Y4B4 1467 aa12.15□□□□□ -0.46
PFDN5-217ENST00000552548 WDR62O43379 1518 aa12.12□□□□□ -0.47
PFDN5-217ENST00000552548 FGD5Q6ZNL6 1462 aa12.12□□□□□ -0.47
PFDN5-217ENST00000552548 CUX2O14529 1486 aa12.11□□□□□ -0.47
PFDN5-217ENST00000552548 DNMBPQ6XZF7 1577 aa12.1□□□□□ -0.47
PFDN5-217ENST00000552548 TRIM41Q8WV44 630 aa12.1□□□□□ -0.47
PFDN5-217ENST00000552548 POLA1P09884 1462 aaPredicted RBP12.09□□□□□ -0.47
PFDN5-217ENST00000552548 RUSC2Q8N2Y8 1516 aa12.09□□□□□ -0.47
PFDN5-217ENST00000552548 TOP2BQ02880 1626 aa12.08□□□□□ -0.48
PFDN5-217ENST00000552548 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
PFDN5-217ENST00000552548 BIVM-ERCC5R4GMW8 1640 aa12.05□□□□□ -0.48
PFDN5-217ENST00000552548 FAM9AQ8IZU1 332 aaPredicted RBP12.05□□□□□ -0.48
PFDN5-217ENST00000552548 SOGA1O94964 1423 aa12.04□□□□□ -0.48
PFDN5-217ENST00000552548 TDRD9Q8NDG6 1382 aaKnown RBP12.04□□□□□ -0.48
PFDN5-217ENST00000552548 AQRO60306 1485 aaKnown RBP eCLIP12.02□□□□□ -0.493e-9■■■■■ 36.3
PFDN5-217ENST00000552548 TARBP1Q13395 1621 aaKnown RBP12□□□□□ -0.49
PFDN5-217ENST00000552548 EHMT2Q96KQ7 1210 aa11.99□□□□□ -0.49
PFDN5-217ENST00000552548 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
PFDN5-217ENST00000552548 WDR97A6NE52 1622 aa11.93□□□□□ -0.5
PFDN5-217ENST00000552548 ABCA10Q8WWZ4 1543 aa11.93□□□□□ -0.5
PFDN5-217ENST00000552548 EIF4G3O43432 1585 aaKnown RBP11.9□□□□□ -0.5
PFDN5-217ENST00000552548 ABCA5Q8WWZ7 1642 aa11.88□□□□□ -0.51
PFDN5-217ENST00000552548 IGF1RP08069 1367 aa11.88□□□□□ -0.51
PFDN5-217ENST00000552548 GAPVD1Q14C86 1478 aa11.88□□□□□ -0.51
PFDN5-217ENST00000552548 LOC105371045A0A1W2PR82 267 aa11.85□□□□□ -0.51
PFDN5-217ENST00000552548 SNAPC4Q5SXM2 1469 aa11.84□□□□□ -0.51
PFDN5-217ENST00000552548 KIF27Q86VH2 1401 aa11.84□□□□□ -0.51
PFDN5-217ENST00000552548 CSRNP3Q8WYN3 585 aa11.81□□□□□ -0.52
PFDN5-217ENST00000552548 FBLN2P98095 1184 aa11.8□□□□□ -0.52
PFDN5-217ENST00000552548 GRIN2BQ13224 1484 aa11.8□□□□□ -0.52
PFDN5-217ENST00000552548 PBRM1Q86U86 1689 aa11.8□□□□□ -0.52
PFDN5-217ENST00000552548 CARMIL1Q5VZK9 1371 aa11.77□□□□□ -0.53
PFDN5-217ENST00000552548 RAPGEF2Q9Y4G8 1499 aa11.76□□□□□ -0.53
PFDN5-217ENST00000552548 ADAMTS12P58397 1594 aa11.75□□□□□ -0.53
PFDN5-217ENST00000552548 PRXQ9BXM0 1461 aa11.74□□□□□ -0.53
PFDN5-217ENST00000552548 RANGAP1P46060 587 aaPredicted RBP11.73□□□□□ -0.53
PFDN5-217ENST00000552548 ERICH3Q5RHP9 1530 aa11.73□□□□□ -0.53
PFDN5-217ENST00000552548 FHAD1B1AJZ9 1412 aa11.71□□□□□ -0.53
PFDN5-217ENST00000552548 CHMP7Q8WUX9 453 aaPredicted RBP11.71□□□□□ -0.53
PFDN5-217ENST00000552548 CHD1O14646 1710 aa11.71□□□□□ -0.54
PFDN5-217ENST00000552548 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
PFDN5-217ENST00000552548 GRIN2AQ12879 1464 aa11.69□□□□□ -0.54
PFDN5-217ENST00000552548 MAGI1Q96QZ7 1491 aaPredicted RBP11.69□□□□□ -0.54
PFDN5-217ENST00000552548 CEP170Q5SW79 1584 aa11.68□□□□□ -0.54
PFDN5-217ENST00000552548 EEA1Q15075 1411 aa11.68□□□□□ -0.54
PFDN5-217ENST00000552548 UBTFP17480 764 aaKnown RBP11.64□□□□□ -0.55
PFDN5-217ENST00000552548 CUL7Q14999 1698 aa11.64□□□□□ -0.55
PFDN5-217ENST00000552548 KIF21BO75037 1637 aa11.63□□□□□ -0.55
PFDN5-217ENST00000552548 ERCC6L2Q5T890 1561 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms