RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
CDK4-212ENST00000552388 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
CDK4-212ENST00000552388 EEA1Q15075 1411 aa21.99■■□□□ 1.11
CDK4-212ENST00000552388 RAPGEF2Q9Y4G8 1499 aa21.92■■□□□ 1.1
CDK4-212ENST00000552388 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
CDK4-212ENST00000552388 CSRNP3Q8WYN3 585 aa21.89■■□□□ 1.09
CDK4-212ENST00000552388 KIAA0586Q9BVV6 1533 aa21.82■■□□□ 1.08
CDK4-212ENST00000552388 CTTNBP2Q8WZ74 1663 aa21.82■■□□□ 1.08
CDK4-212ENST00000552388 FAM9AQ8IZU1 332 aaPredicted RBP21.81■■□□□ 1.08
CDK4-212ENST00000552388 KIF13AQ9H1H9 1805 aa21.8■■□□□ 1.08
CDK4-212ENST00000552388 KIF21BO75037 1637 aa21.8■■□□□ 1.08
CDK4-212ENST00000552388 IQGAP2Q13576 1575 aa21.76■■□□□ 1.07
CDK4-212ENST00000552388 PRG4Q92954 1404 aaPredicted RBP21.73■■□□□ 1.07
CDK4-212ENST00000552388 JPH4Q96JJ6 628 aa21.71■■□□□ 1.07
CDK4-212ENST00000552388 MAPKBP1O60336 1514 aa21.7■■□□□ 1.06
CDK4-212ENST00000552388 UGGT2Q9NYU1 1516 aa21.65■■□□□ 1.06
CDK4-212ENST00000552388 ABCC10Q5T3U5 1492 aa21.64■■□□□ 1.06
CDK4-212ENST00000552388 ADCY10Q96PN6 1610 aa21.63■■□□□ 1.05
CDK4-212ENST00000552388 DIP2BQ9P265 1576 aa21.63■■□□□ 1.05
CDK4-212ENST00000552388 GOLGA3Q08378 1498 aa21.63■■□□□ 1.05
CDK4-212ENST00000552388 AEBP2Q6ZN18 517 aaPredicted RBP21.61■■□□□ 1.05
CDK4-212ENST00000552388 DISP1Q96F81 1524 aa21.57■■□□□ 1.04
CDK4-212ENST00000552388 CARMIL2Q6F5E8 1435 aa21.55■■□□□ 1.04
CDK4-212ENST00000552388 KIAA0556O60303 1618 aa21.55■■□□□ 1.04
CDK4-212ENST00000552388 SAMD9Q5K651 1589 aa21.5■■□□□ 1.03
CDK4-212ENST00000552388 UBTFP17480 764 aaKnown RBP21.49■■□□□ 1.03
CDK4-212ENST00000552388 EHMT2Q96KQ7 1210 aa21.47■■□□□ 1.03
CDK4-212ENST00000552388 TNIKQ9UKE5 1360 aa21.47■■□□□ 1.03
CDK4-212ENST00000552388 FAM69CQ0P6D2 419 aa21.43■■□□□ 1.02
CDK4-212ENST00000552388 EFCAB5A4FU69 1503 aa21.42■■□□□ 1.02
CDK4-212ENST00000552388 PTPRGP23470 1445 aa21.42■■□□□ 1.02
CDK4-212ENST00000552388 KDM6BO15054 1643 aa21.41■■□□□ 1.02
CDK4-212ENST00000552388 ABCC2Q92887 1545 aa21.37■■□□□ 1.01
CDK4-212ENST00000552388 GLI2P10070 1586 aa21.36■■□□□ 1.01
CDK4-212ENST00000552388 NPM1P06748 294 aaKnown RBP eCLIP21.36■■□□□ 1.01
CDK4-212ENST00000552388 UHRF1BP1LA0JNW5 1464 aa21.36■■□□□ 1.01
CDK4-212ENST00000552388 PPRC1Q5VV67 1664 aaKnown RBP21.35■■□□□ 1.01
CDK4-212ENST00000552388 RANGAP1P46060 587 aaPredicted RBP21.33■■□□□ 1.01
CDK4-212ENST00000552388 ARHGAP35Q9NRY4 1499 aa21.32■■□□□ 1
CDK4-212ENST00000552388 TTBK1Q5TCY1 1321 aaPredicted RBP21.31■■□□□ 1
CDK4-212ENST00000552388 UACAQ9BZF9 1416 aa21.31■■□□□ 1
CDK4-212ENST00000552388 P3H3Q8IVL6 736 aa21.31■■□□□ 1
CDK4-212ENST00000552388 ABCA8O94911 1581 aa21.3■■□□□ 1
CDK4-212ENST00000552388 FHOD3Q2V2M9 1422 aa21.29■■□□□ 1
CDK4-212ENST00000552388 TSPOAP1O95153 1857 aa21.29■■□□□ 1
CDK4-212ENST00000552388 PLB1Q6P1J6 1458 aa21.27■■□□□ 1
CDK4-212ENST00000552388 ASXL2Q76L83 1435 aa21.26■□□□□ 0.99
CDK4-212ENST00000552388 KDM5BQ9UGL1 1544 aa21.25■□□□□ 0.99
CDK4-212ENST00000552388 KDM4FA0A1W2PPD8 638 aa21.25■□□□□ 0.99
CDK4-212ENST00000552388 LOC105371045A0A1W2PR82 267 aa21.25■□□□□ 0.99
CDK4-212ENST00000552388 RAPGEF6Q8TEU7 1601 aa21.24■□□□□ 0.99
CDK4-212ENST00000552388 MAP3K4Q9Y6R4 1608 aa21.22■□□□□ 0.99
CDK4-212ENST00000552388 CLIP1P30622 1438 aa21.22■□□□□ 0.99
CDK4-212ENST00000552388 ZCCHC11Q5TAX3 1644 aaKnown RBP21.21■□□□□ 0.99
CDK4-212ENST00000552388 EPRSP07814 1512 aaKnown RBP21.19■□□□□ 0.98
CDK4-212ENST00000552388 CEP162Q5TB80 1403 aa21.18■□□□□ 0.98
CDK4-212ENST00000552388 FMN1Q68DA7 1419 aa21.18■□□□□ 0.98
CDK4-212ENST00000552388 COL17A1Q9UMD9 1497 aaPredicted RBP21.14■□□□□ 0.98
CDK4-212ENST00000552388 NUP153P49790 1475 aaKnown RBP21.12■□□□□ 0.97
CDK4-212ENST00000552388 HECW1Q76N89 1606 aa21.1■□□□□ 0.97
CDK4-212ENST00000552388 ATP10BO94823 1461 aa21.08■□□□□ 0.97
CDK4-212ENST00000552388 TEX14Q8IWB6 1497 aa21.08■□□□□ 0.97
CDK4-212ENST00000552388 ADGRL1O94910 1474 aa21.07■□□□□ 0.96
CDK4-212ENST00000552388 LRRIQ1Q96JM4 1722 aa21.07■□□□□ 0.96
CDK4-212ENST00000552388 PCF11O94913 1555 aaKnown RBP21.07■□□□□ 0.96
CDK4-212ENST00000552388 WDR7Q9Y4E6 1490 aa21.06■□□□□ 0.96
CDK4-212ENST00000552388 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
CDK4-212ENST00000552388 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
CDK4-212ENST00000552388 MAGI3Q5TCQ9 1506 aa21■□□□□ 0.95
CDK4-212ENST00000552388 CFAP43Q8NDM7 1665 aa20.99■□□□□ 0.95
CDK4-212ENST00000552388 ARID3CA6NKF2 412 aa20.99■□□□□ 0.95
CDK4-212ENST00000552388 CDK13Q14004 1512 aaKnown RBP20.99■□□□□ 0.95
CDK4-212ENST00000552388 CCDC18Q5T9S5 1454 aa20.95■□□□□ 0.94
CDK4-212ENST00000552388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.94■□□□□ 0.94
CDK4-212ENST00000552388 HNRNPUL2Q1KMD3 747 aaKnown RBP20.94■□□□□ 0.94
CDK4-212ENST00000552388 ATP1B4Q9UN42 357 aaPredicted RBP20.94■□□□□ 0.94
CDK4-212ENST00000552388 VPS8Q8N3P4 1428 aa20.93■□□□□ 0.94
CDK4-212ENST00000552388 HECW2Q9P2P5 1572 aa20.89■□□□□ 0.93
CDK4-212ENST00000552388 PLEKHD1A6NEE1 506 aa20.88■□□□□ 0.93
CDK4-212ENST00000552388 CD109Q6YHK3 1445 aa20.87■□□□□ 0.93
CDK4-212ENST00000552388 ABCA9Q8IUA7 1624 aa20.87■□□□□ 0.93
CDK4-212ENST00000552388 KCNH8Q96L42 1107 aa20.85■□□□□ 0.93
CDK4-212ENST00000552388 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
CDK4-212ENST00000552388 ARAP3Q8WWN8 1544 aa20.84■□□□□ 0.93
CDK4-212ENST00000552388 TROQ12816 1431 aaPredicted RBP20.82■□□□□ 0.92
CDK4-212ENST00000552388 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.8■□□□□ 0.922e-6■■■■■ 31.3
CDK4-212ENST00000552388 KIF14Q15058 1648 aa20.8■□□□□ 0.92
CDK4-212ENST00000552388 TIAM1Q13009 1591 aa20.79■□□□□ 0.92
CDK4-212ENST00000552388 TTC37Q6PGP7 1564 aa20.78■□□□□ 0.92
CDK4-212ENST00000552388 MAP3K1Q13233 1512 aa20.77■□□□□ 0.92
CDK4-212ENST00000552388 ILDR1Q86SU0 546 aaPredicted RBP20.76■□□□□ 0.91
CDK4-212ENST00000552388 MYO5CQ9NQX4 1742 aa20.75■□□□□ 0.91
CDK4-212ENST00000552388 EHBP1L1Q8N3D4 1523 aa20.73■□□□□ 0.91
CDK4-212ENST00000552388 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
CDK4-212ENST00000552388 FRMPD1Q5SYB0 1578 aa20.71■□□□□ 0.91
CDK4-212ENST00000552388 ADAMTSL3P82987 1691 aa20.7■□□□□ 0.91
CDK4-212ENST00000552388 MTUS2Q5JR59 1369 aa20.7■□□□□ 0.9
CDK4-212ENST00000552388 NEO1Q92859 1461 aa20.69■□□□□ 0.9
CDK4-212ENST00000552388 CDC42BPAQ5VT25 1732 aa20.69■□□□□ 0.9
CDK4-212ENST00000552388 SUPT6HQ7KZ85 1726 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms