RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
DDX54-210ENST00000552375 JPH4Q96JJ6 628 aa24.11■■□□□ 1.45
DDX54-210ENST00000552375 KIAA0586Q9BVV6 1533 aa24.09■■□□□ 1.45
DDX54-210ENST00000552375 CARMIL1Q5VZK9 1371 aa24.08■■□□□ 1.45
DDX54-210ENST00000552375 RAPGEF2Q9Y4G8 1499 aa23.92■■□□□ 1.42
DDX54-210ENST00000552375 IQGAP2Q13576 1575 aa23.9■■□□□ 1.42
DDX54-210ENST00000552375 CARMIL2Q6F5E8 1435 aa23.84■■□□□ 1.41
DDX54-210ENST00000552375 ADCY10Q96PN6 1610 aa23.83■■□□□ 1.41
DDX54-210ENST00000552375 MAPKBP1O60336 1514 aa23.79■■□□□ 1.4
DDX54-210ENST00000552375 TNIKQ9UKE5 1360 aa23.79■■□□□ 1.4
DDX54-210ENST00000552375 PTPRGP23470 1445 aa23.79■■□□□ 1.4
DDX54-210ENST00000552375 DISP1Q96F81 1524 aa23.77■■□□□ 1.4
DDX54-210ENST00000552375 UGGT2Q9NYU1 1516 aa23.77■■□□□ 1.4
DDX54-210ENST00000552375 PRXQ9BXM0 1461 aa23.76■■□□□ 1.39
DDX54-210ENST00000552375 NPM1P06748 294 aaKnown RBP eCLIP23.74■■□□□ 1.39
DDX54-210ENST00000552375 ABCC10Q5T3U5 1492 aa23.71■■□□□ 1.39
DDX54-210ENST00000552375 KIAA0556O60303 1618 aa23.69■■□□□ 1.38
DDX54-210ENST00000552375 ABCC2Q92887 1545 aa23.68■■□□□ 1.38
DDX54-210ENST00000552375 KIF13AQ9H1H9 1805 aa23.67■■□□□ 1.38
DDX54-210ENST00000552375 DIP2BQ9P265 1576 aa23.66■■□□□ 1.38
DDX54-210ENST00000552375 TTBK1Q5TCY1 1321 aaPredicted RBP23.66■■□□□ 1.38
DDX54-210ENST00000552375 UHRF1BP1LA0JNW5 1464 aa23.66■■□□□ 1.38
DDX54-210ENST00000552375 CTTNBP2Q8WZ74 1663 aa23.65■■□□□ 1.38
DDX54-210ENST00000552375 UACAQ9BZF9 1416 aa23.64■■□□□ 1.37
DDX54-210ENST00000552375 FAM69CQ0P6D2 419 aa23.62■■□□□ 1.37
DDX54-210ENST00000552375 EEA1Q15075 1411 aa23.61■■□□□ 1.37
DDX54-210ENST00000552375 GOLGA3Q08378 1498 aa23.6■■□□□ 1.37
DDX54-210ENST00000552375 CSRNP3Q8WYN3 585 aa23.57■■□□□ 1.36
DDX54-210ENST00000552375 KDM5BQ9UGL1 1544 aa23.54■■□□□ 1.36
DDX54-210ENST00000552375 ASXL2Q76L83 1435 aa23.54■■□□□ 1.36
DDX54-210ENST00000552375 PLB1Q6P1J6 1458 aa23.54■■□□□ 1.36
DDX54-210ENST00000552375 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
DDX54-210ENST00000552375 ABCA8O94911 1581 aa23.45■■□□□ 1.34
DDX54-210ENST00000552375 GLI2P10070 1586 aa23.45■■□□□ 1.34
DDX54-210ENST00000552375 ZCCHC11Q5TAX3 1644 aaKnown RBP23.44■■□□□ 1.34
DDX54-210ENST00000552375 EPRSP07814 1512 aaKnown RBP23.41■■□□□ 1.34
DDX54-210ENST00000552375 SAMD9Q5K651 1589 aa23.4■■□□□ 1.34
DDX54-210ENST00000552375 FAM9AQ8IZU1 332 aaPredicted RBP23.4■■□□□ 1.34
DDX54-210ENST00000552375 WDR7Q9Y4E6 1490 aa23.38■■□□□ 1.33
DDX54-210ENST00000552375 KIF21BO75037 1637 aa23.37■■□□□ 1.33
DDX54-210ENST00000552375 KDM6BO15054 1643 aa23.36■■□□□ 1.33
DDX54-210ENST00000552375 TSPOAP1O95153 1857 aa23.33■■□□□ 1.33
DDX54-210ENST00000552375 PPRC1Q5VV67 1664 aaKnown RBP23.32■■□□□ 1.32
DDX54-210ENST00000552375 P3H3Q8IVL6 736 aa23.31■■□□□ 1.32
DDX54-210ENST00000552375 MAP3K4Q9Y6R4 1608 aa23.3■■□□□ 1.32
DDX54-210ENST00000552375 TEX14Q8IWB6 1497 aa23.26■■□□□ 1.31
DDX54-210ENST00000552375 FHOD3Q2V2M9 1422 aa23.25■■□□□ 1.31
DDX54-210ENST00000552375 EFCAB5A4FU69 1503 aa23.24■■□□□ 1.31
DDX54-210ENST00000552375 ATP10BO94823 1461 aa23.23■■□□□ 1.31
DDX54-210ENST00000552375 RAPGEF6Q8TEU7 1601 aa23.22■■□□□ 1.31
DDX54-210ENST00000552375 RANGAP1P46060 587 aaPredicted RBP23.2■■□□□ 1.3
DDX54-210ENST00000552375 EHMT2Q96KQ7 1210 aa23.2■■□□□ 1.3
DDX54-210ENST00000552375 ARID3CA6NKF2 412 aa23.18■■□□□ 1.3
DDX54-210ENST00000552375 AEBP2Q6ZN18 517 aaPredicted RBP23.18■■□□□ 1.3
DDX54-210ENST00000552375 MAGI3Q5TCQ9 1506 aa23.18■■□□□ 1.3
DDX54-210ENST00000552375 NUP153P49790 1475 aaKnown RBP23.17■■□□□ 1.3
DDX54-210ENST00000552375 CD109Q6YHK3 1445 aa23.16■■□□□ 1.3
DDX54-210ENST00000552375 CFAP43Q8NDM7 1665 aa23.16■■□□□ 1.3
DDX54-210ENST00000552375 COL17A1Q9UMD9 1497 aaPredicted RBP23.16■■□□□ 1.3
DDX54-210ENST00000552375 KCNH8Q96L42 1107 aa23.14■■□□□ 1.29
DDX54-210ENST00000552375 UBTFP17480 764 aaKnown RBP23.11■■□□□ 1.29
DDX54-210ENST00000552375 ABCA9Q8IUA7 1624 aa23.07■■□□□ 1.28
DDX54-210ENST00000552375 ARHGAP35Q9NRY4 1499 aa23.05■■□□□ 1.28
DDX54-210ENST00000552375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.04■■□□□ 1.28
DDX54-210ENST00000552375 HNRNPUL2Q1KMD3 747 aaKnown RBP23.04■■□□□ 1.28
DDX54-210ENST00000552375 FMN1Q68DA7 1419 aa23.01■■□□□ 1.27
DDX54-210ENST00000552375 KDM4FA0A1W2PPD8 638 aa22.97■■□□□ 1.27
DDX54-210ENST00000552375 ARAP3Q8WWN8 1544 aa22.97■■□□□ 1.27
DDX54-210ENST00000552375 CDK13Q14004 1512 aaKnown RBP22.96■■□□□ 1.27
DDX54-210ENST00000552375 PLEKHD1A6NEE1 506 aa22.95■■□□□ 1.26
DDX54-210ENST00000552375 HECW1Q76N89 1606 aa22.95■■□□□ 1.26
DDX54-210ENST00000552375 PHLDB1Q86UU1 1377 aa22.95■■□□□ 1.26
DDX54-210ENST00000552375 NEO1Q92859 1461 aa22.94■■□□□ 1.26
DDX54-210ENST00000552375 ADGRL1O94910 1474 aa22.92■■□□□ 1.26
DDX54-210ENST00000552375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.88■■□□□ 1.25
DDX54-210ENST00000552375 TTC37Q6PGP7 1564 aa22.87■■□□□ 1.25
DDX54-210ENST00000552375 FANCAO15360 1455 aa22.82■■□□□ 1.24
DDX54-210ENST00000552375 ATP1B4Q9UN42 357 aaPredicted RBP22.82■■□□□ 1.24
DDX54-210ENST00000552375 FRMPD1Q5SYB0 1578 aa22.81■■□□□ 1.24
DDX54-210ENST00000552375 CFAP74Q9C0B2 1584 aa22.81■■□□□ 1.24
DDX54-210ENST00000552375 PCF11O94913 1555 aaKnown RBP22.8■■□□□ 1.24
DDX54-210ENST00000552375 RAPGEF3O95398 923 aa22.79■■□□□ 1.24
DDX54-210ENST00000552375 CASKIN1Q8WXD9 1431 aa22.79■■□□□ 1.24
DDX54-210ENST00000552375 CLIP1P30622 1438 aa22.78■■□□□ 1.24
DDX54-210ENST00000552375 TROQ12816 1431 aaPredicted RBP22.78■■□□□ 1.24
DDX54-210ENST00000552375 AKNAQ7Z591 1439 aa22.78■■□□□ 1.24
DDX54-210ENST00000552375 CDK11AQ9UQ88 783 aaPredicted RBP22.78■■□□□ 1.24
DDX54-210ENST00000552375 DENND4BO75064 1496 aaPredicted RBP22.76■■□□□ 1.23
DDX54-210ENST00000552375 CCDC18Q5T9S5 1454 aa22.76■■□□□ 1.23
DDX54-210ENST00000552375 KIF14Q15058 1648 aa22.75■■□□□ 1.23
DDX54-210ENST00000552375 PLCH2O75038 1416 aa22.74■■□□□ 1.23
DDX54-210ENST00000552375 FYCO1Q9BQS8 1478 aa22.73■■□□□ 1.23
DDX54-210ENST00000552375 LRRIQ1Q96JM4 1722 aa22.72■■□□□ 1.23
DDX54-210ENST00000552375 ARHGEF40Q8TER5 1519 aa22.72■■□□□ 1.23
DDX54-210ENST00000552375 ZMYM4Q5VZL5 1548 aa22.7■■□□□ 1.22
DDX54-210ENST00000552375 RICTORQ6R327 1708 aa22.7■■□□□ 1.22
DDX54-210ENST00000552375 POGZQ7Z3K3 1410 aa22.67■■□□□ 1.22
DDX54-210ENST00000552375 MYO5CQ9NQX4 1742 aa22.66■■□□□ 1.22
DDX54-210ENST00000552375 SCAPERQ9BY12 1400 aa22.64■■□□□ 1.21
DDX54-210ENST00000552375 ARHGAP5Q13017 1502 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms