RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 NISCHQ9Y2I1 1504 aa34.69■■■■□ 3.14
DDX54-210ENST00000552375 CCDC180Q9P1Z9 1646 aa30.99■■■□□ 2.55
DDX54-210ENST00000552375 ABCC9O60706 1549 aa30.68■■■□□ 2.5
DDX54-210ENST00000552375 RB1CC1Q8TDY2 1594 aa29.35■■■□□ 2.29
DDX54-210ENST00000552375 NACADO15069 1562 aa29.24■■■□□ 2.27
DDX54-210ENST00000552375 DCAF8L2P0C7V8 631 aa29.01■■■□□ 2.23
DDX54-210ENST00000552375 MYO15BQ96JP2 1530 aa28.99■■■□□ 2.23
DDX54-210ENST00000552375 ZCCHC6Q5VYS8 1495 aaKnown RBP28.86■■■□□ 2.21
DDX54-210ENST00000552375 DCAF1Q9Y4B6 1507 aa28.72■■■□□ 2.19
DDX54-210ENST00000552375 UNC13AQ9UPW8 1703 aa28.58■■■□□ 2.17
DDX54-210ENST00000552375 PABPN1Q86U42 306 aaKnown RBP eCLIP28.57■■■□□ 2.16
DDX54-210ENST00000552375 BICRAQ9NZM4 1560 aa28.47■■■□□ 2.15
DDX54-210ENST00000552375 DNAJC5BQ9UF47 199 aa28.44■■■□□ 2.14
DDX54-210ENST00000552375 SCRIBQ14160 1630 aa28.25■■■□□ 2.11
DDX54-210ENST00000552375 SHROOM4Q9ULL8 1493 aa28.24■■■□□ 2.11
DDX54-210ENST00000552375 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
DDX54-210ENST00000552375 CC2D2AQ9P2K1 1620 aa27.72■■■□□ 2.03
DDX54-210ENST00000552375 CECR2Q9BXF3 1484 aa27.63■■■□□ 2.01
DDX54-210ENST00000552375 NCAPD3P42695 1498 aa27■■□□□ 1.91
DDX54-210ENST00000552375 SMARCA4P51532 1647 aa26.99■■□□□ 1.91
DDX54-210ENST00000552375 ATAD2BQ9ULI0 1458 aa26.96■■□□□ 1.91
DDX54-210ENST00000552375 BAZ1AQ9NRL2 1556 aaPredicted RBP26.92■■□□□ 1.9
DDX54-210ENST00000552375 SMARCA2P51531 1590 aa26.9■■□□□ 1.9
DDX54-210ENST00000552375 HMGXB3Q12766 1538 aa26.85■■□□□ 1.89
DDX54-210ENST00000552375 PEG3Q9GZU2 1588 aa26.76■■□□□ 1.87
DDX54-210ENST00000552375 MROH2BQ7Z745 1585 aa26.72■■□□□ 1.87
DDX54-210ENST00000552375 BAZ1BQ9UIG0 1483 aaKnown RBP26.71■■□□□ 1.87
DDX54-210ENST00000552375 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
DDX54-210ENST00000552375 NESP48681 1621 aa26.43■■□□□ 1.82
DDX54-210ENST00000552375 CUX2O14529 1486 aa26.37■■□□□ 1.81
DDX54-210ENST00000552375 WIZO95785 1651 aa26.36■■□□□ 1.81
DDX54-210ENST00000552375 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.8
DDX54-210ENST00000552375 RSF1Q96T23 1441 aaPredicted RBP26.29■■□□□ 1.8
DDX54-210ENST00000552375 CADPSQ9ULU8 1353 aa26.19■■□□□ 1.78
DDX54-210ENST00000552375 PDS5BQ9NTI5 1447 aa26.17■■□□□ 1.78
DDX54-210ENST00000552375 THOC2Q8NI27 1593 aaKnown RBP26.15■■□□□ 1.78
DDX54-210ENST00000552375 TOP2AP11388 1531 aaKnown RBP26.14■■□□□ 1.78
DDX54-210ENST00000552375 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
DDX54-210ENST00000552375 CFTRP13569 1480 aa25.97■■□□□ 1.75
DDX54-210ENST00000552375 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
DDX54-210ENST00000552375 DNAJC5Q9H3Z4 198 aa25.92■■□□□ 1.74
DDX54-210ENST00000552375 CEP164Q9UPV0 1460 aa25.9■■□□□ 1.74
DDX54-210ENST00000552375 FANCD2Q9BXW9 1451 aa25.89■■□□□ 1.73
DDX54-210ENST00000552375 WDR62O43379 1518 aa25.88■■□□□ 1.73
DDX54-210ENST00000552375 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
DDX54-210ENST00000552375 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
DDX54-210ENST00000552375 PRDM2Q13029 1718 aa25.64■■□□□ 1.7
DDX54-210ENST00000552375 TOPBP1Q92547 1522 aa25.42■■□□□ 1.66
DDX54-210ENST00000552375 ABCC8Q09428 1581 aa25.39■■□□□ 1.65
DDX54-210ENST00000552375 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
DDX54-210ENST00000552375 DNMBPQ6XZF7 1577 aa25.37■■□□□ 1.65
DDX54-210ENST00000552375 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
DDX54-210ENST00000552375 SUPT5HO00267 1087 aaKnown RBP25.26■■□□□ 1.63
DDX54-210ENST00000552375 POLA1P09884 1462 aaPredicted RBP25.21■■□□□ 1.63
DDX54-210ENST00000552375 EIF4G3O43432 1585 aaKnown RBP25.17■■□□□ 1.62
DDX54-210ENST00000552375 TARBP1Q13395 1621 aaKnown RBP25.16■■□□□ 1.62
DDX54-210ENST00000552375 OSCARQ8IYS5 282 aa25.12■■□□□ 1.61
DDX54-210ENST00000552375 CUX1P39880 1505 aa25.1■■□□□ 1.61
DDX54-210ENST00000552375 FGD5Q6ZNL6 1462 aa25.08■■□□□ 1.6
DDX54-210ENST00000552375 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.66e-7■■■■■ 35.7
DDX54-210ENST00000552375 RAD54L2Q9Y4B4 1467 aa25.06■■□□□ 1.6
DDX54-210ENST00000552375 SOGA1O94964 1423 aa25.04■■□□□ 1.6
DDX54-210ENST00000552375 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
DDX54-210ENST00000552375 TDRD9Q8NDG6 1382 aaKnown RBP24.95■■□□□ 1.59
DDX54-210ENST00000552375 TRIM41Q8WV44 630 aa24.89■■□□□ 1.58
DDX54-210ENST00000552375 SNAPC4Q5SXM2 1469 aa24.87■■□□□ 1.57
DDX54-210ENST00000552375 GRIN2BQ13224 1484 aa24.84■■□□□ 1.57
DDX54-210ENST00000552375 CHD1O14646 1710 aa24.84■■□□□ 1.57
DDX54-210ENST00000552375 ABCA10Q8WWZ4 1543 aa24.83■■□□□ 1.57
DDX54-210ENST00000552375 MAGI1Q96QZ7 1491 aaPredicted RBP24.83■■□□□ 1.56
DDX54-210ENST00000552375 WRNQ14191 1432 aaPredicted RBP eCLIP24.8■■□□□ 1.56
DDX54-210ENST00000552375 ARHGEF11O15085 1522 aa24.8■■□□□ 1.56
DDX54-210ENST00000552375 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
DDX54-210ENST00000552375 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
DDX54-210ENST00000552375 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
DDX54-210ENST00000552375 FBLN2P98095 1184 aa24.79■■□□□ 1.56
DDX54-210ENST00000552375 TOP2BQ02880 1626 aa24.78■■□□□ 1.56
DDX54-210ENST00000552375 GAPVD1Q14C86 1478 aa24.77■■□□□ 1.56
DDX54-210ENST00000552375 BIVM-ERCC5R4GMW8 1640 aa24.76■■□□□ 1.55
DDX54-210ENST00000552375 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
DDX54-210ENST00000552375 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
DDX54-210ENST00000552375 SYNJ2O15056 1496 aa24.72■■□□□ 1.55
DDX54-210ENST00000552375 PBRM1Q86U86 1689 aa24.7■■□□□ 1.54
DDX54-210ENST00000552375 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
DDX54-210ENST00000552375 CLASP1Q7Z460 1538 aa24.66■■□□□ 1.54
DDX54-210ENST00000552375 ARAP1Q96P48 1450 aa24.58■■□□□ 1.53
DDX54-210ENST00000552375 ADAMTS12P58397 1594 aa24.57■■□□□ 1.52
DDX54-210ENST00000552375 GRIN2AQ12879 1464 aa24.52■■□□□ 1.52
DDX54-210ENST00000552375 ERICH3Q5RHP9 1530 aa24.51■■□□□ 1.51
DDX54-210ENST00000552375 CYB5RLQ6IPT4 315 aa24.5■■□□□ 1.51
DDX54-210ENST00000552375 FHAD1B1AJZ9 1412 aa24.49■■□□□ 1.51
DDX54-210ENST00000552375 NUP160Q12769 1436 aa24.45■■□□□ 1.51
DDX54-210ENST00000552375 CEP170Q5SW79 1584 aa24.41■■□□□ 1.5
DDX54-210ENST00000552375 KIF27Q86VH2 1401 aa24.32■■□□□ 1.48
DDX54-210ENST00000552375 SHROOM2Q13796 1616 aa24.27■■□□□ 1.48
DDX54-210ENST00000552375 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
DDX54-210ENST00000552375 IGF1RP08069 1367 aa24.24■■□□□ 1.47
DDX54-210ENST00000552375 RUSC2Q8N2Y8 1516 aa24.21■■□□□ 1.47
DDX54-210ENST00000552375 CUL7Q14999 1698 aa24.21■■□□□ 1.47
DDX54-210ENST00000552375 PRG4Q92954 1404 aaPredicted RBP24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms