RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 JPH4Q96JJ6 628 aa29.15■■■□□ 2.26
RAB5C-209ENST00000552162 MAPKBP1O60336 1514 aa29.01■■■□□ 2.23
RAB5C-209ENST00000552162 ABCC10Q5T3U5 1492 aa29■■■□□ 2.23
RAB5C-209ENST00000552162 ADCY10Q96PN6 1610 aa29■■■□□ 2.23
RAB5C-209ENST00000552162 DIP2BQ9P265 1576 aa28.96■■■□□ 2.23
RAB5C-209ENST00000552162 NPM1P06748 294 aaKnown RBP eCLIP28.96■■■□□ 2.23
RAB5C-209ENST00000552162 FAM69CQ0P6D2 419 aa28.95■■■□□ 2.22
RAB5C-209ENST00000552162 KIAA0586Q9BVV6 1533 aa28.94■■■□□ 2.22
RAB5C-209ENST00000552162 CUL7Q14999 1698 aa28.94■■■□□ 2.22
RAB5C-209ENST00000552162 IGF1RP08069 1367 aa28.89■■■□□ 2.22
RAB5C-209ENST00000552162 KIF27Q86VH2 1401 aa28.89■■■□□ 2.22
RAB5C-209ENST00000552162 KDM6BO15054 1643 aa28.8■■■□□ 2.2
RAB5C-209ENST00000552162 TSPOAP1O95153 1857 aa28.78■■■□□ 2.2
RAB5C-209ENST00000552162 PTPRGP23470 1445 aa28.72■■■□□ 2.19
RAB5C-209ENST00000552162 CARMIL1Q5VZK9 1371 aa28.7■■■□□ 2.18
RAB5C-209ENST00000552162 CARMIL2Q6F5E8 1435 aa28.67■■■□□ 2.18
RAB5C-209ENST00000552162 IQGAP2Q13576 1575 aa28.66■■■□□ 2.18
RAB5C-209ENST00000552162 TNIKQ9UKE5 1360 aa28.65■■■□□ 2.18
RAB5C-209ENST00000552162 ABCC2Q92887 1545 aa28.65■■■□□ 2.18
RAB5C-209ENST00000552162 TTBK1Q5TCY1 1321 aaPredicted RBP28.65■■■□□ 2.18
RAB5C-209ENST00000552162 KDM4FA0A1W2PPD8 638 aa28.58■■■□□ 2.17
RAB5C-209ENST00000552162 ASXL2Q76L83 1435 aa28.58■■■□□ 2.17
RAB5C-209ENST00000552162 PPRC1Q5VV67 1664 aaKnown RBP28.55■■■□□ 2.16
RAB5C-209ENST00000552162 UHRF1BP1LA0JNW5 1464 aa28.55■■■□□ 2.16
RAB5C-209ENST00000552162 PLB1Q6P1J6 1458 aa28.55■■■□□ 2.16
RAB5C-209ENST00000552162 GLI2P10070 1586 aa28.54■■■□□ 2.16
RAB5C-209ENST00000552162 DISP1Q96F81 1524 aa28.53■■■□□ 2.16
RAB5C-209ENST00000552162 UACAQ9BZF9 1416 aa28.51■■■□□ 2.15
RAB5C-209ENST00000552162 UGGT2Q9NYU1 1516 aa28.44■■■□□ 2.14
RAB5C-209ENST00000552162 RAPGEF2Q9Y4G8 1499 aa28.43■■■□□ 2.14
RAB5C-209ENST00000552162 KDM5BQ9UGL1 1544 aa28.43■■■□□ 2.14
RAB5C-209ENST00000552162 KIAA0556O60303 1618 aa28.41■■■□□ 2.14
RAB5C-209ENST00000552162 MAP3K4Q9Y6R4 1608 aa28.41■■■□□ 2.14
RAB5C-209ENST00000552162 EPRSP07814 1512 aaKnown RBP28.41■■■□□ 2.14
RAB5C-209ENST00000552162 ZCCHC11Q5TAX3 1644 aaKnown RBP28.4■■■□□ 2.14
RAB5C-209ENST00000552162 ADGRL1O94910 1474 aa28.34■■■□□ 2.13
RAB5C-209ENST00000552162 TEX14Q8IWB6 1497 aa28.33■■■□□ 2.13
RAB5C-209ENST00000552162 COL17A1Q9UMD9 1497 aaPredicted RBP28.33■■■□□ 2.13
RAB5C-209ENST00000552162 CTTNBP2Q8WZ74 1663 aa28.29■■■□□ 2.12
RAB5C-209ENST00000552162 WDR7Q9Y4E6 1490 aa28.26■■■□□ 2.11
RAB5C-209ENST00000552162 GOLGA3Q08378 1498 aa28.18■■■□□ 2.1
RAB5C-209ENST00000552162 ABCA8O94911 1581 aa28.16■■■□□ 2.1
RAB5C-209ENST00000552162 CFAP43Q8NDM7 1665 aa28.15■■■□□ 2.1
RAB5C-209ENST00000552162 MAGI3Q5TCQ9 1506 aa28.1■■■□□ 2.09
RAB5C-209ENST00000552162 CD109Q6YHK3 1445 aa28.09■■■□□ 2.09
RAB5C-209ENST00000552162 HECW2Q9P2P5 1572 aa28.07■■■□□ 2.08
RAB5C-209ENST00000552162 PRXQ9BXM0 1461 aa28.05■■■□□ 2.08
RAB5C-209ENST00000552162 ILDR1Q86SU0 546 aaPredicted RBP28.04■■■□□ 2.08
RAB5C-209ENST00000552162 KCNH8Q96L42 1107 aa28.04■■■□□ 2.08
RAB5C-209ENST00000552162 KIF21BO75037 1637 aa27.95■■■□□ 2.06
RAB5C-209ENST00000552162 ARAP3Q8WWN8 1544 aa27.89■■■□□ 2.06
RAB5C-209ENST00000552162 ARID3CA6NKF2 412 aa27.89■■■□□ 2.06
RAB5C-209ENST00000552162 ATP10BO94823 1461 aa27.89■■■□□ 2.05
RAB5C-209ENST00000552162 ABCA9Q8IUA7 1624 aa27.86■■■□□ 2.05
RAB5C-209ENST00000552162 FAM9AQ8IZU1 332 aaPredicted RBP27.86■■■□□ 2.05
RAB5C-209ENST00000552162 P3H3Q8IVL6 736 aa27.85■■■□□ 2.05
RAB5C-209ENST00000552162 SAMD9Q5K651 1589 aa27.84■■■□□ 2.05
RAB5C-209ENST00000552162 RAPGEF6Q8TEU7 1601 aa27.81■■■□□ 2.04
RAB5C-209ENST00000552162 PHLDB1Q86UU1 1377 aa27.76■■■□□ 2.03
RAB5C-209ENST00000552162 NEO1Q92859 1461 aa27.72■■■□□ 2.03
RAB5C-209ENST00000552162 ADAMTSL3P82987 1691 aa27.72■■■□□ 2.03
RAB5C-209ENST00000552162 CSRNP3Q8WYN3 585 aa27.7■■■□□ 2.02
RAB5C-209ENST00000552162 FRMPD1Q5SYB0 1578 aa27.69■■■□□ 2.02
RAB5C-209ENST00000552162 RAPGEF3O95398 923 aa27.68■■■□□ 2.02
RAB5C-209ENST00000552162 NUP153P49790 1475 aaKnown RBP27.68■■■□□ 2.02
RAB5C-209ENST00000552162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.67■■■□□ 2.02
RAB5C-209ENST00000552162 HNRNPUL2Q1KMD3 747 aaKnown RBP27.67■■■□□ 2.02
RAB5C-209ENST00000552162 PTPRMP28827 1452 aa27.67■■■□□ 2.02
RAB5C-209ENST00000552162 BCORL1Q5H9F3 1711 aa27.64■■■□□ 2.01
RAB5C-209ENST00000552162 FHOD3Q2V2M9 1422 aa27.61■■■□□ 2.01
RAB5C-209ENST00000552162 MADDQ8WXG6 1647 aa27.59■■■□□ 2.01
RAB5C-209ENST00000552162 ARHGEF40Q8TER5 1519 aa27.57■■■□□ 2
RAB5C-209ENST00000552162 RANGAP1P46060 587 aaPredicted RBP27.57■■■□□ 2
RAB5C-209ENST00000552162 EEA1Q15075 1411 aa27.57■■■□□ 2
RAB5C-209ENST00000552162 RICTORQ6R327 1708 aa27.55■■■□□ 2
RAB5C-209ENST00000552162 ARID4BQ4LE39 1312 aaPredicted RBP27.54■■■□□ 2
RAB5C-209ENST00000552162 CFAP74Q9C0B2 1584 aa27.53■■■□□ 2
RAB5C-209ENST00000552162 DENND4BO75064 1496 aaPredicted RBP27.51■■■□□ 2
RAB5C-209ENST00000552162 PCF11O94913 1555 aaKnown RBP27.51■■□□□ 1.99
RAB5C-209ENST00000552162 PLEKHD1A6NEE1 506 aa27.5■■□□□ 1.99
RAB5C-209ENST00000552162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.5■■□□□ 1.99
RAB5C-209ENST00000552162 FANCAO15360 1455 aa27.5■■□□□ 1.99
RAB5C-209ENST00000552162 EFCAB5A4FU69 1503 aa27.49■■□□□ 1.99
RAB5C-209ENST00000552162 RIMS1Q86UR5 1692 aaKnown RBP27.49■■□□□ 1.99
RAB5C-209ENST00000552162 AKNAQ7Z591 1439 aa27.49■■□□□ 1.99
RAB5C-209ENST00000552162 TTC37Q6PGP7 1564 aa27.48■■□□□ 1.99
RAB5C-209ENST00000552162 LMTK3Q96Q04 1460 aa27.46■■□□□ 1.99
RAB5C-209ENST00000552162 FBXO41Q8TF61 875 aa27.46■■□□□ 1.99
RAB5C-209ENST00000552162 ZMYM4Q5VZL5 1548 aa27.44■■□□□ 1.98
RAB5C-209ENST00000552162 ZFYVE16Q7Z3T8 1539 aa27.4■■□□□ 1.98
RAB5C-209ENST00000552162 CDK13Q14004 1512 aaKnown RBP27.39■■□□□ 1.98
RAB5C-209ENST00000552162 SIGLEC1Q9BZZ2 1709 aa27.38■■□□□ 1.97
RAB5C-209ENST00000552162 POGZQ7Z3K3 1410 aa27.36■■□□□ 1.97
RAB5C-209ENST00000552162 YEATS2Q9ULM3 1422 aa27.36■■□□□ 1.97
RAB5C-209ENST00000552162 HECW1Q76N89 1606 aa27.34■■□□□ 1.97
RAB5C-209ENST00000552162 MAGI2Q86UL8 1455 aa27.33■■□□□ 1.97
RAB5C-209ENST00000552162 PLCH2O75038 1416 aa27.29■■□□□ 1.96
RAB5C-209ENST00000552162 FER1L4A9Z1Z3 1794 aa27.29■■□□□ 1.96
RAB5C-209ENST00000552162 SCAPERQ9BY12 1400 aa27.27■■□□□ 1.96
RAB5C-209ENST00000552162 PLPPR3Q6T4P5 718 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms