RNA–Protein interactions for RNA: ENST00000551888.5

CDK4-210, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-210ENST00000551888 EEA1Q15075 1411 aa29.5■■■□□ 2.31
CDK4-210ENST00000551888 ERCC6L2Q5T890 1561 aa29.49■■■□□ 2.31
CDK4-210ENST00000551888 KIAA0586Q9BVV6 1533 aa29.45■■■□□ 2.31
CDK4-210ENST00000551888 ARAP1Q96P48 1450 aa29.45■■■□□ 2.31
CDK4-210ENST00000551888 CSRNP3Q8WYN3 585 aa29.42■■■□□ 2.3
CDK4-210ENST00000551888 FAM9AQ8IZU1 332 aaPredicted RBP29.4■■■□□ 2.3
CDK4-210ENST00000551888 CTTNBP2Q8WZ74 1663 aa29.38■■■□□ 2.29
CDK4-210ENST00000551888 IQGAP2Q13576 1575 aa29.37■■■□□ 2.29
CDK4-210ENST00000551888 JPH4Q96JJ6 628 aa29.34■■■□□ 2.29
CDK4-210ENST00000551888 PRG4Q92954 1404 aaPredicted RBP29.33■■■□□ 2.29
CDK4-210ENST00000551888 KIF21BO75037 1637 aa29.31■■■□□ 2.28
CDK4-210ENST00000551888 CYB5RLQ6IPT4 315 aa29.27■■■□□ 2.28
CDK4-210ENST00000551888 UGGT2Q9NYU1 1516 aa29.2■■■□□ 2.27
CDK4-210ENST00000551888 DISP1Q96F81 1524 aa29.16■■■□□ 2.26
CDK4-210ENST00000551888 KIAA0556O60303 1618 aa29.12■■■□□ 2.25
CDK4-210ENST00000551888 GOLGA3Q08378 1498 aa29.07■■■□□ 2.24
CDK4-210ENST00000551888 CARMIL2Q6F5E8 1435 aa29.07■■■□□ 2.24
CDK4-210ENST00000551888 EHMT2Q96KQ7 1210 aa29.03■■■□□ 2.24
CDK4-210ENST00000551888 TNIKQ9UKE5 1360 aa29■■■□□ 2.23
CDK4-210ENST00000551888 SAMD9Q5K651 1589 aa28.99■■■□□ 2.23
CDK4-210ENST00000551888 ADCY10Q96PN6 1610 aa28.98■■■□□ 2.23
CDK4-210ENST00000551888 PTPRGP23470 1445 aa28.95■■■□□ 2.23
CDK4-210ENST00000551888 TTBK1Q5TCY1 1321 aaPredicted RBP28.91■■■□□ 2.22
CDK4-210ENST00000551888 UBTFP17480 764 aaKnown RBP28.88■■■□□ 2.21
CDK4-210ENST00000551888 RANGAP1P46060 587 aaPredicted RBP28.84■■■□□ 2.21
CDK4-210ENST00000551888 EFCAB5A4FU69 1503 aa28.82■■■□□ 2.2
CDK4-210ENST00000551888 P3H3Q8IVL6 736 aa28.81■■■□□ 2.2
CDK4-210ENST00000551888 ABCC2Q92887 1545 aa28.8■■■□□ 2.2
CDK4-210ENST00000551888 UACAQ9BZF9 1416 aa28.8■■■□□ 2.2
CDK4-210ENST00000551888 UHRF1BP1LA0JNW5 1464 aa28.79■■■□□ 2.2
CDK4-210ENST00000551888 ABCA8O94911 1581 aa28.79■■■□□ 2.2
CDK4-210ENST00000551888 PLB1Q6P1J6 1458 aa28.78■■■□□ 2.2
CDK4-210ENST00000551888 FHOD3Q2V2M9 1422 aa28.77■■■□□ 2.2
CDK4-210ENST00000551888 ARHGAP35Q9NRY4 1499 aa28.72■■■□□ 2.19
CDK4-210ENST00000551888 MAPKBP1O60336 1514 aa28.7■■■□□ 2.19
CDK4-210ENST00000551888 ZCCHC11Q5TAX3 1644 aaKnown RBP28.69■■■□□ 2.18
CDK4-210ENST00000551888 KDM5BQ9UGL1 1544 aa28.68■■■□□ 2.18
CDK4-210ENST00000551888 RAPGEF6Q8TEU7 1601 aa28.65■■■□□ 2.18
CDK4-210ENST00000551888 KIF13AQ9H1H9 1805 aa28.64■■■□□ 2.17
CDK4-210ENST00000551888 NPM1P06748 294 aaKnown RBP eCLIP28.62■■■□□ 2.17
CDK4-210ENST00000551888 TRHP20396 242 aaPredicted RBP28.58■■■□□ 2.17
CDK4-210ENST00000551888 LOC105371045A0A1W2PR82 267 aa28.57■■■□□ 2.16
CDK4-210ENST00000551888 DIP2BQ9P265 1576 aa28.56■■■□□ 2.16
CDK4-210ENST00000551888 NUP153P49790 1475 aaKnown RBP28.54■■■□□ 2.16
CDK4-210ENST00000551888 CLIP1P30622 1438 aa28.54■■■□□ 2.16
CDK4-210ENST00000551888 ASXL2Q76L83 1435 aa28.54■■■□□ 2.16
CDK4-210ENST00000551888 ABCC10Q5T3U5 1492 aa28.52■■■□□ 2.16
CDK4-210ENST00000551888 ATP10BO94823 1461 aa28.5■■■□□ 2.15
CDK4-210ENST00000551888 FMN1Q68DA7 1419 aa28.49■■■□□ 2.15
CDK4-210ENST00000551888 CEP162Q5TB80 1403 aa28.48■■■□□ 2.15
CDK4-210ENST00000551888 ARID3CA6NKF2 412 aa28.47■■■□□ 2.15
CDK4-210ENST00000551888 LRRIQ1Q96JM4 1722 aa28.44■■■□□ 2.14
CDK4-210ENST00000551888 PCF11O94913 1555 aaKnown RBP28.43■■■□□ 2.14
CDK4-210ENST00000551888 WDR7Q9Y4E6 1490 aa28.42■■■□□ 2.14
CDK4-210ENST00000551888 HECW1Q76N89 1606 aa28.42■■■□□ 2.14
CDK4-210ENST00000551888 EPRSP07814 1512 aaKnown RBP28.39■■■□□ 2.14
CDK4-210ENST00000551888 GLI2P10070 1586 aa28.38■■■□□ 2.13
CDK4-210ENST00000551888 FAM69CQ0P6D2 419 aa28.38■■■□□ 2.13
CDK4-210ENST00000551888 CDK13Q14004 1512 aaKnown RBP28.38■■■□□ 2.13
CDK4-210ENST00000551888 TSPOAP1O95153 1857 aa28.34■■■□□ 2.13
CDK4-210ENST00000551888 CASKIN1Q8WXD9 1431 aa28.32■■■□□ 2.12
CDK4-210ENST00000551888 MAP3K4Q9Y6R4 1608 aa28.32■■■□□ 2.12
CDK4-210ENST00000551888 PPRC1Q5VV67 1664 aaKnown RBP28.31■■■□□ 2.12
CDK4-210ENST00000551888 FYCO1Q9BQS8 1478 aa28.28■■■□□ 2.12
CDK4-210ENST00000551888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.25■■■□□ 2.11
CDK4-210ENST00000551888 HNRNPUL2Q1KMD3 747 aaKnown RBP28.25■■■□□ 2.11
CDK4-210ENST00000551888 ATP1B4Q9UN42 357 aaPredicted RBP28.24■■■□□ 2.11
CDK4-210ENST00000551888 CFAP43Q8NDM7 1665 aa28.23■■■□□ 2.11
CDK4-210ENST00000551888 KCNH8Q96L42 1107 aa28.22■■■□□ 2.11
CDK4-210ENST00000551888 ABCA9Q8IUA7 1624 aa28.2■■■□□ 2.1
CDK4-210ENST00000551888 CCDC18Q5T9S5 1454 aa28.18■■■□□ 2.1
CDK4-210ENST00000551888 MAGI3Q5TCQ9 1506 aa28.14■■■□□ 2.1
CDK4-210ENST00000551888 PLEKHD1A6NEE1 506 aa28.13■■■□□ 2.09
CDK4-210ENST00000551888 TTC37Q6PGP7 1564 aa28.12■■■□□ 2.09
CDK4-210ENST00000551888 VPS8Q8N3P4 1428 aa28.12■■■□□ 2.09
CDK4-210ENST00000551888 KIF14Q15058 1648 aa28.11■■■□□ 2.09
CDK4-210ENST00000551888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.11■■■□□ 2.092e-6■■■■□ 26.7
CDK4-210ENST00000551888 CD109Q6YHK3 1445 aa28.1■■■□□ 2.09
CDK4-210ENST00000551888 TROQ12816 1431 aaPredicted RBP28.08■■■□□ 2.09
CDK4-210ENST00000551888 TEX14Q8IWB6 1497 aa28.04■■■□□ 2.08
CDK4-210ENST00000551888 KDM6BO15054 1643 aa28.03■■■□□ 2.08
CDK4-210ENST00000551888 CDK11AQ9UQ88 783 aaPredicted RBP28.02■■■□□ 2.08
CDK4-210ENST00000551888 TIAM1Q13009 1591 aa27.97■■■□□ 2.07
CDK4-210ENST00000551888 MYO5CQ9NQX4 1742 aa27.97■■■□□ 2.07
CDK4-210ENST00000551888 COL17A1Q9UMD9 1497 aaPredicted RBP27.95■■■□□ 2.07
CDK4-210ENST00000551888 EHBP1L1Q8N3D4 1523 aa27.91■■■□□ 2.06
CDK4-210ENST00000551888 CDC42BPAQ5VT25 1732 aa27.89■■■□□ 2.05
CDK4-210ENST00000551888 CDC42BPBQ9Y5S2 1711 aa27.88■■■□□ 2.05
CDK4-210ENST00000551888 NEO1Q92859 1461 aa27.88■■■□□ 2.05
CDK4-210ENST00000551888 PREX2Q70Z35 1606 aa27.87■■■□□ 2.05
CDK4-210ENST00000551888 CFAP74Q9C0B2 1584 aa27.86■■■□□ 2.05
CDK4-210ENST00000551888 PLCH2O75038 1416 aa27.86■■■□□ 2.05
CDK4-210ENST00000551888 ARAP3Q8WWN8 1544 aa27.86■■■□□ 2.05
CDK4-210ENST00000551888 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
CDK4-210ENST00000551888 FANCAO15360 1455 aa27.85■■■□□ 2.05
CDK4-210ENST00000551888 MAP3K1Q13233 1512 aa27.85■■■□□ 2.05
CDK4-210ENST00000551888 LRRC9Q6ZRR7 1453 aa27.8■■■□□ 2.04
CDK4-210ENST00000551888 FRMPD1Q5SYB0 1578 aa27.79■■■□□ 2.04
CDK4-210ENST00000551888 SUPT6HQ7KZ85 1726 aaKnown RBP27.78■■■□□ 2.04
CDK4-210ENST00000551888 ARHGAP5Q13017 1502 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms