RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-223ENST00000551551 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
ATXN2-223ENST00000551551 PLPPR3Q6T4P5 718 aa15.3■□□□□ 0.04
ATXN2-223ENST00000551551 CARMIL1Q5VZK9 1371 aa15.28■□□□□ 0.04
ATXN2-223ENST00000551551 PIAS4Q8N2W9 510 aaPredicted RBP15.28■□□□□ 0.04
ATXN2-223ENST00000551551 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
ATXN2-223ENST00000551551 CUL7Q14999 1698 aa15.25■□□□□ 0.03
ATXN2-223ENST00000551551 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
ATXN2-223ENST00000551551 FAM9AQ8IZU1 332 aaPredicted RBP15.24■□□□□ 0.03
ATXN2-223ENST00000551551 KIAA0586Q9BVV6 1533 aa15.23■□□□□ 0.03
ATXN2-223ENST00000551551 NPM1P06748 294 aaKnown RBP eCLIP15.23■□□□□ 0.03
ATXN2-223ENST00000551551 CEP170Q5SW79 1584 aa15.2■□□□□ 0.02
ATXN2-223ENST00000551551 PRG4Q92954 1404 aaPredicted RBP15.19■□□□□ 0.02
ATXN2-223ENST00000551551 CARMIL2Q6F5E8 1435 aa15.17■□□□□ 0.02
ATXN2-223ENST00000551551 SHROOM2Q13796 1616 aa15.17■□□□□ 0.02
ATXN2-223ENST00000551551 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
ATXN2-223ENST00000551551 PPP6R1Q9UPN7 881 aa15.14■□□□□ 0.01
ATXN2-223ENST00000551551 EEA1Q15075 1411 aa15.1■□□□□ 0.01
ATXN2-223ENST00000551551 ADRA2BP18089 450 aa15.1■□□□□ 0.01
ATXN2-223ENST00000551551 RUSC2Q8N2Y8 1516 aa15.08■□□□□ 0.01
ATXN2-223ENST00000551551 CSRNP3Q8WYN3 585 aa15.08■□□□□ 0
ATXN2-223ENST00000551551 PTPRGP23470 1445 aa15.08■□□□□ 0
ATXN2-223ENST00000551551 TNIKQ9UKE5 1360 aa15.07■□□□□ 0
ATXN2-223ENST00000551551 IQGAP2Q13576 1575 aa15.02■□□□□ -0
ATXN2-223ENST00000551551 GOLGA3Q08378 1498 aa15.01□□□□□ -0.01
ATXN2-223ENST00000551551 ERCC6L2Q5T890 1561 aa15.01□□□□□ -0.01
ATXN2-223ENST00000551551 PRXQ9BXM0 1461 aa15□□□□□ -0.01
ATXN2-223ENST00000551551 UGGT2Q9NYU1 1516 aa14.97□□□□□ -0.01
ATXN2-223ENST00000551551 UHRF1BP1LA0JNW5 1464 aa14.94□□□□□ -0.02
ATXN2-223ENST00000551551 UACAQ9BZF9 1416 aa14.93□□□□□ -0.02
ATXN2-223ENST00000551551 MAPKBP1O60336 1514 aa14.93□□□□□ -0.02
ATXN2-223ENST00000551551 FAM69CQ0P6D2 419 aa14.93□□□□□ -0.02
ATXN2-223ENST00000551551 ABCC10Q5T3U5 1492 aa14.9□□□□□ -0.02
ATXN2-223ENST00000551551 PLB1Q6P1J6 1458 aa14.9□□□□□ -0.02
ATXN2-223ENST00000551551 ABCC2Q92887 1545 aa14.9□□□□□ -0.02
ATXN2-223ENST00000551551 DISP1Q96F81 1524 aa14.89□□□□□ -0.03
ATXN2-223ENST00000551551 TTBK1Q5TCY1 1321 aaPredicted RBP14.88□□□□□ -0.03
ATXN2-223ENST00000551551 ADCY10Q96PN6 1610 aa14.84□□□□□ -0.03
ATXN2-223ENST00000551551 CTTNBP2Q8WZ74 1663 aa14.84□□□□□ -0.03
ATXN2-223ENST00000551551 KDM5BQ9UGL1 1544 aa14.82□□□□□ -0.04
ATXN2-223ENST00000551551 KIAA0556O60303 1618 aa14.82□□□□□ -0.04
ATXN2-223ENST00000551551 UBTFP17480 764 aaKnown RBP14.8□□□□□ -0.04
ATXN2-223ENST00000551551 ASXL2Q76L83 1435 aa14.8□□□□□ -0.04
ATXN2-223ENST00000551551 GLI2P10070 1586 aa14.76□□□□□ -0.05
ATXN2-223ENST00000551551 KIF21BO75037 1637 aa14.74□□□□□ -0.05
ATXN2-223ENST00000551551 TEX14Q8IWB6 1497 aa14.74□□□□□ -0.05
ATXN2-223ENST00000551551 DIP2BQ9P265 1576 aa14.73□□□□□ -0.05
ATXN2-223ENST00000551551 KIF13AQ9H1H9 1805 aa14.72□□□□□ -0.05
ATXN2-223ENST00000551551 P3H3Q8IVL6 736 aa14.72□□□□□ -0.05
ATXN2-223ENST00000551551 PHLDB1Q86UU1 1377 aa14.72□□□□□ -0.05
ATXN2-223ENST00000551551 WDR7Q9Y4E6 1490 aa14.71□□□□□ -0.05
ATXN2-223ENST00000551551 PLEKHD1A6NEE1 506 aa14.71□□□□□ -0.05
ATXN2-223ENST00000551551 CDK11AQ9UQ88 783 aaPredicted RBP14.71□□□□□ -0.05
ATXN2-223ENST00000551551 EFCAB5A4FU69 1503 aa14.71□□□□□ -0.06
ATXN2-223ENST00000551551 ABCA8O94911 1581 aa14.7□□□□□ -0.06
ATXN2-223ENST00000551551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.7□□□□□ -0.06
ATXN2-223ENST00000551551 HNRNPUL2Q1KMD3 747 aaKnown RBP14.7□□□□□ -0.06
ATXN2-223ENST00000551551 EPRSP07814 1512 aaKnown RBP14.69□□□□□ -0.06
ATXN2-223ENST00000551551 KCNH8Q96L42 1107 aa14.68□□□□□ -0.06
ATXN2-223ENST00000551551 SAMD9Q5K651 1589 aa14.67□□□□□ -0.06
ATXN2-223ENST00000551551 FMN1Q68DA7 1419 aa14.66□□□□□ -0.06
ATXN2-223ENST00000551551 ZCCHC11Q5TAX3 1644 aaKnown RBP14.66□□□□□ -0.06
ATXN2-223ENST00000551551 CD109Q6YHK3 1445 aa14.65□□□□□ -0.06
ATXN2-223ENST00000551551 ATP10BO94823 1461 aa14.63□□□□□ -0.07
ATXN2-223ENST00000551551 RANGAP1P46060 587 aaPredicted RBP14.63□□□□□ -0.07
ATXN2-223ENST00000551551 MAGI3Q5TCQ9 1506 aa14.61□□□□□ -0.07
ATXN2-223ENST00000551551 KDM6BO15054 1643 aa14.6□□□□□ -0.07
ATXN2-223ENST00000551551 RAPGEF6Q8TEU7 1601 aa14.59□□□□□ -0.07
ATXN2-223ENST00000551551 MAP3K4Q9Y6R4 1608 aa14.58□□□□□ -0.08
ATXN2-223ENST00000551551 CFAP43Q8NDM7 1665 aa14.57□□□□□ -0.08
ATXN2-223ENST00000551551 FHOD3Q2V2M9 1422 aa14.57□□□□□ -0.08
ATXN2-223ENST00000551551 TSPOAP1O95153 1857 aa14.55□□□□□ -0.08
ATXN2-223ENST00000551551 ATP1B4Q9UN42 357 aaPredicted RBP14.54□□□□□ -0.08
ATXN2-223ENST00000551551 NUP153P49790 1475 aaKnown RBP14.54□□□□□ -0.08
ATXN2-223ENST00000551551 ARID3CA6NKF2 412 aa14.52□□□□□ -0.09
ATXN2-223ENST00000551551 NEO1Q92859 1461 aa14.51□□□□□ -0.09
ATXN2-223ENST00000551551 ARAP3Q8WWN8 1544 aa14.51□□□□□ -0.09
ATXN2-223ENST00000551551 ARHGAP35Q9NRY4 1499 aa14.5□□□□□ -0.09
ATXN2-223ENST00000551551 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
ATXN2-223ENST00000551551 CLIP1P30622 1438 aa14.49□□□□□ -0.09
ATXN2-223ENST00000551551 ABCA9Q8IUA7 1624 aa14.48□□□□□ -0.09
ATXN2-223ENST00000551551 EFCAB2Q5VUJ9 269 aa14.47□□□□□ -0.09
ATXN2-223ENST00000551551 PPRC1Q5VV67 1664 aaKnown RBP14.46□□□□□ -0.1
ATXN2-223ENST00000551551 HECW1Q76N89 1606 aa14.45□□□□□ -0.1
ATXN2-223ENST00000551551 CCDC18Q5T9S5 1454 aa14.44□□□□□ -0.1
ATXN2-223ENST00000551551 CASKIN1Q8WXD9 1431 aa14.44□□□□□ -0.1
ATXN2-223ENST00000551551 COL17A1Q9UMD9 1497 aaPredicted RBP14.42□□□□□ -0.1
ATXN2-223ENST00000551551 PLCH2O75038 1416 aa14.41□□□□□ -0.1
ATXN2-223ENST00000551551 CFAP74Q9C0B2 1584 aa14.41□□□□□ -0.1
ATXN2-223ENST00000551551 TROQ12816 1431 aaPredicted RBP14.41□□□□□ -0.1
ATXN2-223ENST00000551551 AKNAQ7Z591 1439 aa14.4□□□□□ -0.1
ATXN2-223ENST00000551551 FANCAO15360 1455 aa14.39□□□□□ -0.11
ATXN2-223ENST00000551551 DENND4BO75064 1496 aaPredicted RBP14.39□□□□□ -0.11
ATXN2-223ENST00000551551 KDM4FA0A1W2PPD8 638 aa14.38□□□□□ -0.11
ATXN2-223ENST00000551551 MAGI2Q86UL8 1455 aa14.38□□□□□ -0.11
ATXN2-223ENST00000551551 FYCO1Q9BQS8 1478 aa14.38□□□□□ -0.11
ATXN2-223ENST00000551551 RAPGEF3O95398 923 aa14.36□□□□□ -0.11
ATXN2-223ENST00000551551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.36□□□□□ -0.11
ATXN2-223ENST00000551551 POGZQ7Z3K3 1410 aa14.33□□□□□ -0.11
ATXN2-223ENST00000551551 CDK13Q14004 1512 aaKnown RBP14.33□□□□□ -0.12
ATXN2-223ENST00000551551 KIF14Q15058 1648 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms